Os05g0417700

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0417700| Description = Conserved hypothetical protein| Version = NM_001062100.2 GI:297604517 GeneID:4338811| Length = 1620 bp| Definition ...")
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Gene Name

Os05g0417700

Description

Conserved hypothetical protein

Version

NM_001062100.2 GI:297604517 GeneID:4338811

Length

1620 bp

Definition

Oryza sativa Japonica Group Os05g0417700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20464197..20465816

Sequence Coding Region

20464197..20464490,20465565..20465816

Expression

GEO Profiles:Os05g0417700

Genome Context

<gbrowseImage1> name=NC_008398:20464197..20465816 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20464197..20465816 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcattggtggttcctatgggccggtgatcgtggctctggcgatcatcgctaccctcacggttgcttctattgccgttggtcagctttgcgtgggacgtggcacacccatcaagcctgggcaaggtatgggagcctttgtgaagaagagcataggagggaacaaagctgcctatgatgatgccctccctgagaagaagaaggaagaagacgtggagaacgccactgtggaggaggtggagaaatcggagccaccaaaggtggaagaggacgatgacgggagttcttctcaagatggtagtggcagaggttggtcgatggtgcctactcatgtgggtggtcggctggcaaatggagcagggtggcccatggagctacccaagtggagggccgtggtaacggaaaagtggataatggccaatctgcggcatcaagacagtgtggtggtgcatggaggtggcatagcaggccagtcccactcttcccttccgctggatttggtgagcaggcatcgacgacagcaagatggcacagtggtggtgtag</cdnaseq>

Protein Sequence

<aaseq>MGIGGSYGPVIVALAIIATLTVASIAVGQLCVGRGTPIKPGQGM GAFVKKSIGGNKAAYDDALPEKKKEEDVENATVEEVEKSEPPKVEEDDDGSSSQDGSG RGWSMVPTHVGGRLANGAGWPMELPKWRAVVTEKWIMANLRHQDSVVVHGGGIAGQSH SSLPLDLVSRHRRQQDGTVVV</aaseq>

Gene Sequence

<dnaseqindica>1..294#1369..1620#atgggcattggtggttcctatgggccggtgatcgtggctctggcgatcatcgctaccctcacggttgcttctattgccgttggtcagctttgcgtgggacgtggcacacccatcaagcctgggcaaggtatgggagcctttgtgaagaagagcataggagggaacaaagctgcctatgatgatgccctccctgagaagaagaaggaagaagacgtggagaacgccactgtggaggaggtggagaaatcggagccaccaaaggtggaagaggacgatgacgggagttcttctcaagtgagctcctagtatgggaatcgatctgttttttttgttgttgcttttgtggaggggtttccaagactctttctgtgtgttcctttgattccatggtgtaattgatatcttgggagggattcaatggaattgaagaataataaatgatatattttgtctggtttgttgttgctatatttgcacctacatattaattcttaaggttttcatactaatcttggcttaagattattcaagatcttgttttgctgtagtttttgaactgcatgatctattgcaaaattaaaattttagggttgctatcttgacgtatatgtttctatctgatatgtccatctaagacctagaaggttaaatacgcgcgggaaggatgtttgaatctcatatctagaccctcgatgtatgtttgccgtccgattaagattgtatggttcaatgatcgtgggaaagatgtttaaaccatatatgtgtatacgtttgatgcatgtgtaccatctgattaagattggatgattgaaagattcgcgggaaatatatttaaactcttatatagaccatccacacaagttccaccttataagattagatgattgaatgtttcccaaatatatcttaaccctagccaaaccctcacatggctcccccctgccaccacccacacatacacactctccactctttccctcctccccatggaccctacccctcctcatttccccttttcccgttctcttctttcttcaaatctagtttagtgtttctctatatctataggaacaacggtgcccacgaggtggctggctagtggcttgctccaaacggagctagccaacatctagaacaattatgtctcaggatgattatctagctcactttatgtgaaagctggccagcaacgaggcagggctagccggtgatgcttcaactagcccaggtcgcgatgcaccacaaccttcatatggttgccttcatgtgcatcctcccccttagttagggcatccattgtcaatgatgaggacatgctctgggagccaacacatgtgaggttggtggaggtttcctggtgcgtgcaaggatggtagtggcagaggttggtcgatggtgcctactcatgtgggtggtcggctggcaaatggagcagggtggcccatggagctacccaagtggagggccgtggtaacggaaaagtggataatggccaatctgcggcatcaagacagtgtggtggtgcatggaggtggcatagcaggccagtcccactcttcccttccgctggatttggtgagcaggcatcgacgacagcaagatggcacagtggtggtgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0417700, RefSeq:Os05g0417700