Os05g0419800

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0419800| Description = Lipolytic enzyme, G-D-S-L family protein| Version = NM_001062109.1 GI:115463948 GeneID:4338820| Length = 4595 bp| D...")
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Gene Name

Os05g0419800

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001062109.1 GI:115463948 GeneID:4338820

Length

4595 bp

Definition

Oryza sativa Japonica Group Os05g0419800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20593067..20597661

Sequence Coding Region

20593097..20593430,20595568..20595689,20595837..20596085,20596356..20596605,20597092..20597318

Expression

GEO Profiles:Os05g0419800

Genome Context

<gbrowseImage1> name=NC_008398:20593067..20597661 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20593067..20597661 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgccaccccgtgctgatgctgctcgtcgtggtggtgatgagctggcactggggcggcgcggcggcgcaggtgttccggccgccgtggaacggcacgttcccgatggggccgggcggcggcggcggggggagcgtgggaggaggagggggagcggcggcggcggcgtcggtgccggcgatgttcgtgttcggggactccctgacggacaacgggaacaacaacgacatgacgtcgctggccaaggccaactacctcccctacggcatcgacttcgccggcggcccaaccggccgcttctccaacggctacaccatggtcgacgagatagctgagcttcttgggctgccgctgctgccatctcacaacgacgccacgggcgacgccgcgctccacggcgtgaactacgcctccgccgccgccggcatcctggacaacaccggccagaacttcgttgggcgcagcccgttcaaccagcagatcaagaacttcgaggcgacgctgcagcagatctccggcaagctgggcggcggcgccgccggcaagctggcgccgtcgctggcgcgcagcatcttctacgtcgggatgggcagcaacgactacctcaacaactacctgatgcccaactacaacaccaggaacgagtacaacggcgatcagtactccactctcctcgtgcagcagtacaccaagcagctcaccaggctgtacaacctgggggcgcggaggttcgtgatcgccggagtagggtcgatggcgtgcatccccaacatgcgggcgaggaacccggcgaacatgtgctcgccggacgtggacgacctcatcatccccttcaacagcaaggtgaagtccatggtgaacacgctcaacgtcaacctcccccgcgccaagttcatcttcgtcgacacctatgccatgatctccgaggtcctccgcaacccgtggtcctacgggttcagcgtggtggacagagggtgctgtgggatagggaggaacagggggatgatcacgtgcctgccgttccagcggccgtgcctgaacaggaacacctacatcttctgggacgccttccaccccacggagagggtcaacatcttgctcggcaaggcagcctactccggcggcgccgacctcgtccaccccatgaacatccagcagctcgccgcctggcagccgtag</cdnaseq>

Protein Sequence

<aaseq>MARHPVLMLLVVVVMSWHWGGAAAQVFRPPWNGTFPMGPGGGGG GSVGGGGGAAAAASVPAMFVFGDSLTDNGNNNDMTSLAKANYLPYGIDFAGGPTGRFS NGYTMVDEIAELLGLPLLPSHNDATGDAALHGVNYASAAAGILDNTGQNFVGRSPFNQ QIKNFEATLQQISGKLGGGAAGKLAPSLARSIFYVGMGSNDYLNNYLMPNYNTRNEYN GDQYSTLLVQQYTKQLTRLYNLGARRFVIAGVGSMACIPNMRARNPANMCSPDVDDLI IPFNSKVKSMVNTLNVNLPRAKFIFVDTYAMISEVLRNPWSYGFSVVDRGCCGIGRNR GMITCLPFQRPCLNRNTYIFWDAFHPTERVNILLGKAAYSGGADLVHPMNIQQLAAWQ P</aaseq>

Gene Sequence

<dnaseqindica>31..364#2502..2623#2771..3019#3290..3539#4026..4252#actgcctcactgcagctctgctccgctgcaatggcgcgccaccccgtgctgatgctgctcgtcgtggtggtgatgagctggcactggggcggcgcggcggcgcaggtgttccggccgccgtggaacggcacgttcccgatggggccgggcggcggcggcggggggagcgtgggaggaggagggggagcggcggcggcggcgtcggtgccggcgatgttcgtgttcggggactccctgacggacaacgggaacaacaacgacatgacgtcgctggccaaggccaactacctcccctacggcatcgacttcgccggcggcccaaccggccgcttctccaacggctacaccatggtcgacgagataggtgcgtcgccgtcgcccatagctccatctatctatatgctccatgcatttgcattttgcctaatgcagcttaatacaaagatatgtattcccgaagaaatatgcagtagctagtagtgcagatatgctgcttctactggatgtcacatacatatgggccgtcatagttcatcttgttgtaaatttttaaattacttagggcttgtttggcacatctcaagaaaaataaagtagagctgagccaagccaaacactttcgttgggtggaacgttttcacaaaatgaactagagagatggaactaggtttacgctgcttcacaacctcactccgaattggaactctacaaaatggcccttaaaactagttttgcaagctataacgctttggaaggttcttcgaataagaaaatgataaagttcaaatacttctatagctctagcaagaaatattactcattttgtgttttcagaaaaaaaaaggacttcttccatatttagttatgtgtgtagtcaaacagtcggtcatatgctagaaaataagttatgataaaaaaaatcaactctaaaatttagtattggaatttaaattttagtagcggcttaattataagctagaggatgaaagatgggatatctttggtttccttttggtactgtactgactgttcaaaagtaactattttattttcatttttggatctaatagttatagttatgagcatttgaattatgactaacagaaaatcttactggaattaatgaagattttccaaaccaagtagaatccaaagcacataacaacagctacaatggactcttagaaatgggagttgttagtatgtgaggaagggcccacgctgcaaattaaaccaattgaaggctttgtaattgtacttctagttcattatacttgcttttagcaatgggtgttgtagtatgtgaaatgctaactttaatctgctactgctagtgcactgcaataccttctaataattaattactgattaattaatcttgtacatccttaagtgagttaatcttacaattaaataataaatgaagtgtgtttagctaactactctgttgtggaagagaacttcagtttactacttgttttacaatctttgaaaatttcgtttcaatgctagtataatgttgaagtaatttatttataaatcaagtgtttcactgttccattcgggatgtcttgggtgtgcatatcatattttaatttctcaggaaacctacacttcttctcgatctgtatatgtatctggacaaaattgtgtaggtatctacaatttcattgtttgcaatgtttggatagctgtctcctctgttttacttgaagaagcaatgcaagtcaatatactagagaggatgccaaaatgaagcatagattatgtgtagtatacatagtacttgtcctaattgaaacccaaacatgtacacacacacacacagtgcatgtaatggtccttgcaaaatttagattggttagctagctttgtatgaacatcctagctagctagagtaagtgccgcagttataatactcaccaccctcttgcatgtgcacattcaaagatttcaactcatatccaatatggcctccgtagtgatccatggagtaataatggcagtgctctcaatttctcccatgggtaggtctgccctaccattgattcacctcatgcagtacacatgatggtgatgaattttcatcgacgagtagtagcagctagcactgtaccagcgagtggggaatcaatgtttccatgtgactctatccggaattccagaggctatggctgtaaatgcagaagtgtgtgtacactgtgcagcatgcatggatggatggatatgcagttgcagtccttgataagaatttaccagcaacaagagtgacatccttacaaattagtactaattactagccagatctgtccttgaccgcgactgatctttagtgacgtacctactccagcttagtagtagtaatagctaaaatttatcagtgcaaaagataaatttaaactttgcaaaacaagaagatgtttgatcaagaacagagctaagccgtaagcttcactgaaattattattgtatgctaattgtctcgttggatttttcatcagctgagcttcttgggctgccgctgctgccatctcacaacgacgccacgggcgacgccgcgctccacggcgtgaactacgcctccgccgccgccggcatcctggacaacaccggccagaacttcgtaagaacatgctcatatcaattgcccaagcacgcatgcaccctgatcattagcggattgaccattcctttcatcatcagtcagttcagcaagttaattagtaatctgcattaattttgtctgtggatatgatgcgatgcggtgcaggttgggcgcagcccgttcaaccagcagatcaagaacttcgaggcgacgctgcagcagatctccggcaagctgggcggcggcgccgccggcaagctggcgccgtcgctggcgcgcagcatcttctacgtcgggatgggcagcaacgactacctcaacaactacctgatgcccaactacaacaccaggaacgagtacaacggcgatcagtactccactctcctcgtgcagcagtacaccaagcagctcaccgtacggcaacgaacaatcaatataatcaatcagctaattgattagagatttgctctggtccaaaaaaaaaaaagtatttcgagataccagtacctcacagctagatctaactatcataaacaatttggtaccgtatctcgaggtgtttttcttttagattggtaacttgaggtgttttttttttggaccggagcaaatctcaattgattaaccagcggggttaaatgcatccttagataattatgtgattgattgcgatgagtattgcagaggctgtacaacctgggggcgcggaggttcgtgatcgccggagtagggtcgatggcgtgcatccccaacatgcgggcgaggaacccggcgaacatgtgctcgccggacgtggacgacctcatcatccccttcaacagcaaggtgaagtccatggtgaacacgctcaacgtcaacctcccccgcgccaagttcatcttcgtcgacacctatgccatgatctccgaggtcctccgcaacccgtggtcctacggtacgtaataaatcatctttattcaaccaccaacatcgcgttgacgtcaagtttcgcgtaaaatagaatactatcagtagaaaccaccgtaataacatgacatcatttttcgtgtagaacagaatactgccaatagctagataccatcgtgacatgacgttaattttcgcgtagaacatgatactgccagtagatatcaccgtgacgtgtcatcaattttcacgtagagtagaatactacaagtagatatcaccgtgacgtgacgtcaattttcacgtagatctgaatactaccaatagagatcaccgtgacgtgatgtcaattttcacgtagaacaggatagtaatgatgacatgatgttgaatttcgcaaagaatactatcaatagggatcaccgtgacgtgacatcagcattagcatagaaacagaatactagccgtagagaccaccgtgacgtgatgcgaggtgatgatacatatgatgcagggttcagcgtggtggacagagggtgctgtgggatagggaggaacagggggatgatcacgtgcctgccgttccagcggccgtgcctgaacaggaacacctacatcttctgggacgccttccaccccacggagagggtcaacatcttgctcggcaaggcagcctactccggcggcgccgacctcgtccaccccatgaacatccagcagctcgccgcctggcagccgtagcagctgtcgccgccggcggtcgtgacatatatcctctctcttactctcttcgtcccgaaatataaagaattttggatgaataagacatatctcagtactacgaatttagatatgaagtctgattagattcgtagtatgtgttacatccatccaaaatcttttctattatgtgacggatgaagtacttagggtatgaatctattcgtttttgcatgcagtgttactatgttgttgtagctaggtagggggtgagctaatgaacgagctggggtggtgtttgtttgtgggtgtgtttgtgtgctcagtttggattagggcaagtgctgcttgtgtttgtactact</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0419800, RefSeq:Os05g0419800