Os05g0422050

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0422050| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001187498.1 GI:297724126 GeneID:9269090| Length = 2229 ...")
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Gene Name

Os05g0422050

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001187498.1 GI:297724126 GeneID:9269090

Length

2229 bp

Definition

Oryza sativa Japonica Group Os05g0422050, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20696630..20698858

Sequence Coding Region

20696630..20696683,20697486..20697810,20698275..20698858

Expression

GEO Profiles:Os05g0422050

Genome Context

<gbrowseImage1> name=NC_008398:20696630..20698858 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20696630..20698858 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgtacatctcgaacgcgcaggatgccagtaagctgatcgtgacggcgaagggaggaggaggagaagccgacgacgccgccgcctcctccgctgccgtcgtccttgacctctggcggcagccggccaagatcccggcgccgttcgtctggccgcgcgccgacgtcgcgctgccgccgtcgtcgccgccgacgggggagctggacgtgcccgtggtcgacctcgccgcggcgctacgcgacgccgccgggatgcgccgcgccgtcgcgcaggtggccgccgcgtgcgcgagccacgggttcttccaggtgagcgggcacggcgtgcccccgtcgctggcgcgcgccgcgctcgacggcgccgcgggcttcttccgcctcccgcccgccgcgaagcagcgcgcccgccgcgccccaggcacggtcaccggctacaccgccgcccacgccgaccgcttcgtcgacaacctcccctggaaggagacgctctccttcggccaccgccacgccaacgccgccggcaacaactcctccaccgtcgccgattacttctccaccctaggcgacgacttcaaacacctaggggaggtgtaccaggagtactgcgaggcgatggaggaggtgacgaaggcgataatggcggtgctaggggagagcctgggggtggggggcggatactacagggagttcttcgaggacagcagctcgatcatgcggtgcaactactacccgccgtgcccggagccggagaggacgctggggacggggccgcactgcgacccgtcggcgctcaccgtgctcctccaggacggcgacgtcgacggcctccaggtgctcgtcgccggcgcgtggcgccccgtgcggccgctgcccggcgcgttcgtcgtcaacatcggcgacaccttcatggcatgtagtgatattagagatttatcattgaccaccgtctctaagcagtgttag</cdnaseq>

Protein Sequence

<aaseq>MVYISNAQDASKLIVTAKGGGGEADDAAASSAAVVLDLWRQPAK IPAPFVWPRADVALPPSSPPTGELDVPVVDLAAALRDAAGMRRAVAQVAAACASHGFF QVSGHGVPPSLARAALDGAAGFFRLPPAAKQRARRAPGTVTGYTAAHADRFVDNLPWK ETLSFGHRHANAAGNNSSTVADYFSTLGDDFKHLGEVYQEYCEAMEEVTKAIMAVLGE SLGVGGGYYREFFEDSSSIMRCNYYPPCPEPERTLGTGPHCDPSALTVLLQDGDVDGL QVLVAGAWRPVRPLPGAFVVNIGDTFMACSDIRDLSLTTVSKQC</aaseq>

Gene Sequence

<dnaseqindica>2176..2229#1049..1373#1..584#atggtgtacatctcgaacgcgcaggatgccagtaagctgatcgtgacggcgaagggaggaggaggagaagccgacgacgccgccgcctcctccgctgccgtcgtccttgacctctggcggcagccggccaagatcccggcgccgttcgtctggccgcgcgccgacgtcgcgctgccgccgtcgtcgccgccgacgggggagctggacgtgcccgtggtcgacctcgccgcggcgctacgcgacgccgccgggatgcgccgcgccgtcgcgcaggtggccgccgcgtgcgcgagccacgggttcttccaggtgagcgggcacggcgtgcccccgtcgctggcgcgcgccgcgctcgacggcgccgcgggcttcttccgcctcccgcccgccgcgaagcagcgcgcccgccgcgccccaggcacggtcaccggctacaccgccgcccacgccgaccgcttcgtcgacaacctcccctggaaggagacgctctccttcggccaccgccacgccaacgccgccggcaacaactcctccaccgtcgccgattacttctccaccctaggcgacgacttcaaacacctagggtaaattcacagaaatcactagttagaagaatattttttcatgacgacaccttttttttttaagctagatgtgcactccgcctacgaaaatgtaacgagaaatggcccttacaacccaaaagtattgataaatgtcgctttcactatcaactatcataaagcagccgccagtctggcggctgcgttatgacagtcgtcagcgaaaaggcatcttcgctcgccagcgaaaagggtgtattttcactggtctgtaacggagtggttggccgtccgtgaaaacctaacagagtggttggccgtccgtaaaaacctattttaacaggtttttttttagtagtgcatgcacacatgacaccacctagctacatttgcatgagagatcgatcgatcgatgacatggagtattttttatagataatggattatattaaaccgggcgatgacatggagcataaatgatgcagggaggtgtaccaggagtactgcgaggcgatggaggaggtgacgaaggcgataatggcggtgctaggggagagcctgggggtggggggcggatactacagggagttcttcgaggacagcagctcgatcatgcggtgcaactactacccgccgtgcccggagccggagaggacgctggggacggggccgcactgcgacccgtcggcgctcaccgtgctcctccaggacggcgacgtcgacggcctccaggtgctcgtcgccggcgcgtggcgccccgtgcggccgctgcccggcgcgttcgtcgtcaacatcggcgacaccttcatggtatgtactctagtactcggccgggatatggatctcggatcgatcgatcgccgtgtcgtgtcgtcgtgtccggccatgatggtgtctcatcgcgacctcgacgtacgtcgtcgtctagctccattggctccacccgttttgctcgcgtccgccgtacggcaaaggacgagtagctatagcttagcatcctgaccacacgtaccaaatgctgagatctcacatcgatctcgctataatccgttcggttagtaaattggcatgtctttaatttggaagttaatcatcatatggaatatttgcggtaaaaaaccgtccaagtatgaaaagcaccaagattaattaatccgttgtccgaccgccaagtaaacaccgcaaaaaatatcatgagattcttgtagtgatggtttcgtagaaagaaataaggcatcttatattcattttttggggtttataaaaggaagacgtacacacacatcattatcaaatatcacatgcacaaactaacagtacccaacagcagacagatgtccctactactagcatgcatgtcacttactacaagttcagatcatcttgaaaaaaaaaattatatggttagaaaaaaaaaagcatcacacactcatttggctacacgcgcgtagtgcattttttttggagtaaagcaaccaatatatttcagcaaacttagattcggcaaggcgatcacacatagcatatcatacagtaatataatcacaaccatccgaaaggtcctagaaatgtaatcatagtcataatcataattataattaaaataatataggcatgtagtgatattagagatttatcattgaccaccgtctctaagcagtgttag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0422050, RefSeq:Os05g0422050