Os05g0427400

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0427400| Description = Similar to Phenylalanine ammonia-lyase (Fragment)| Version = NM_001062143.1 GI:115464016 GeneID:4338861| Length = 21...")
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Gene Name

Os05g0427400

Description

Similar to Phenylalanine ammonia-lyase (Fragment)

Version

NM_001062143.1 GI:115464016 GeneID:4338861

Length

2151 bp

Definition

Oryza sativa Japonica Group Os05g0427400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20960453..20962603

Sequence Coding Region

20960453..20962603

Expression

GEO Profiles:Os05g0427400

Genome Context

<gbrowseImage1> name=NC_008398:20960453..20962603 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20960453..20962603 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtgcgagactggctacgtcgccgcggccgccgatggtggtctctgcatggaggtgccccgcgccgacccgctcaactgggggaaggcggcggaggagatggccgggagccacctcgacgaggtgaagaggatggtggcggagtaccggcagcccgtggtgcggatcgagggcgccagcctgaggatcgcgcaggtggcggcggttgccggcgccggcgacggcgaggccgccatggtcgagctcgacgagtcggcgcgggagcgcgtcaaggccagcagcgactgggtgatgaacagcatggcgaacggcaccgacagctacggcgtcaccaccgggttcggcgccacgtcgcaccggcggaccaaggagggcggcgcgctgcagcgggagctcatcaggttcctcaacgccggcgccttcggcaccggcgccgacggccacgtcctccccgcgggtgccacgcgcgcggcgatgctcgtccggatcaacaccctgctgcaaggctactccggcatccggttcgagatcctcgaggcggtcgccaagctgctcaacgccaacgtcacgccgtgcctgccgctccggggcacgatcaccgcgtcgggcgacctcgtcccgctctcctacatcgccgggctcgtcaccggccgggagaactccgtcgcggtggcgcccgacggcaggaaggtgaacgccgccgaggcgttcaagatcgccggcatccagggcggcttcttcgagctgcagcccaaggaaggcctcgccatggtgaacgggacggccgtgggctccggcctcgcctccaccgtgctgttcgaggccaacgtcctcgccatcctcgccgaggtgctctccgccgtgttctgcgaggtgatgaacggcaagccggagtacaccgaccacctcacccacaagctgaagcaccacccggggcagatcgaggcggccgccatcatggagcacatcttggaaggcagctcgtacatgaaggaggcgaagaggctcggcgagctcgacccgctgatgaagccgaagcaggacaggtacgcgctccggacgtcgccgcagtggctcggcccccagatcgaggtcatccgcgccgccaccaagtcgatcgagcgcgagatcaactccgtcaacgacaacccgctcatcgacgtctcccgcgggaaggcgctgcacggcggcaacttccagggcacccccatcggcgtgtccatggacaacacccgcctcgccatcgccgccatcgggaagctcatgttcgcgcagttctccgagctggtgaacgacttctacaacaacggcctgccctccaacctctccggcggccgcaacccgagcttggactacggcttcaagggcgccgagatcgccatggcgtcctactgctccgagctgcagttcttgggcaacccggtgaccaaccacgtccagagcgccgagcagcacaaccaggacgtgaactcgctgggcctcatctcctccaggaagacggcggaggccatcgacatcctcaagctcatgtcctccaccttcctcgtcgcgctctgccaggcgatcgacctgcgccacatcgaggagaacgtcaagggcgccgtcaagacctgcgtcatgacggtcgccaagaagacgctgagcaccaactccaccggcggcctccacgtcgcccgcttctgcgagaaggacctgctcagcgagatcgaccgggaggccgtgttcgcgtacgccgacgacccgtgcagcgccaactacccgctgatgaagaagctccgcagcgtgctcgtcgagcgcgcgctcgccaacggcgccgccgagttcgacgcggagacctccgtgctcgccaaggtcgcgcggttcgaggaggagctccgcgcggcgctgccccgggccgtcgaggccgcgcgcgccgccgtggagagcggcacggcggcggcgcccaacaggatcgccgagtgccgctcgtacccgctctaccggttcgtgcgcgaggagctcggcaccgcctacctcaccggcgagaagacgcggtcgcccggcgaggagctcaacaaggtgctcgtcgcgatcaaccagggcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgcgccactgccaatctgctga</cdnaseq>

Protein Sequence

<aaseq>MECETGYVAAAADGGLCMEVPRADPLNWGKAAEEMAGSHLDEVK RMVAEYRQPVVRIEGASLRIAQVAAVAGAGDGEAAMVELDESARERVKASSDWVMNSM ANGTDSYGVTTGFGATSHRRTKEGGALQRELIRFLNAGAFGTGADGHVLPAGATRAAM LVRINTLLQGYSGIRFEILEAVAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTG RENSVAVAPDGRKVNAAEAFKIAGIQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEA NVLAILAEVLSAVFCEVMNGKPEYTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKEA KRLGELDPLMKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREINSVNDNPLIDVSRG KALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS LDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTAEAIDIL KLMSSTFLVALCQAIDLRHIEENVKGAVKTCVMTVAKKTLSTNSTGGLHVARFCEKDL LSEIDREAVFAYADDPCSANYPLMKKLRSVLVERALANGAAEFDAETSVLAKVARFEE ELRAALPRAVEAARAAVESGTAAAPNRIAECRSYPLYRFVREELGTAYLTGEKTRSPG EELNKVLVAINQGKHIDPLLECLKEWNGAPLPIC</aaseq>

Gene Sequence

<dnaseqindica>1..2151#atggagtgcgagactggctacgtcgccgcggccgccgatggtggtctctgcatggaggtgccccgcgccgacccgctcaactgggggaaggcggcggaggagatggccgggagccacctcgacgaggtgaagaggatggtggcggagtaccggcagcccgtggtgcggatcgagggcgccagcctgaggatcgcgcaggtggcggcggttgccggcgccggcgacggcgaggccgccatggtcgagctcgacgagtcggcgcgggagcgcgtcaaggccagcagcgactgggtgatgaacagcatggcgaacggcaccgacagctacggcgtcaccaccgggttcggcgccacgtcgcaccggcggaccaaggagggcggcgcgctgcagcgggagctcatcaggttcctcaacgccggcgccttcggcaccggcgccgacggccacgtcctccccgcgggtgccacgcgcgcggcgatgctcgtccggatcaacaccctgctgcaaggctactccggcatccggttcgagatcctcgaggcggtcgccaagctgctcaacgccaacgtcacgccgtgcctgccgctccggggcacgatcaccgcgtcgggcgacctcgtcccgctctcctacatcgccgggctcgtcaccggccgggagaactccgtcgcggtggcgcccgacggcaggaaggtgaacgccgccgaggcgttcaagatcgccggcatccagggcggcttcttcgagctgcagcccaaggaaggcctcgccatggtgaacgggacggccgtgggctccggcctcgcctccaccgtgctgttcgaggccaacgtcctcgccatcctcgccgaggtgctctccgccgtgttctgcgaggtgatgaacggcaagccggagtacaccgaccacctcacccacaagctgaagcaccacccggggcagatcgaggcggccgccatcatggagcacatcttggaaggcagctcgtacatgaaggaggcgaagaggctcggcgagctcgacccgctgatgaagccgaagcaggacaggtacgcgctccggacgtcgccgcagtggctcggcccccagatcgaggtcatccgcgccgccaccaagtcgatcgagcgcgagatcaactccgtcaacgacaacccgctcatcgacgtctcccgcgggaaggcgctgcacggcggcaacttccagggcacccccatcggcgtgtccatggacaacacccgcctcgccatcgccgccatcgggaagctcatgttcgcgcagttctccgagctggtgaacgacttctacaacaacggcctgccctccaacctctccggcggccgcaacccgagcttggactacggcttcaagggcgccgagatcgccatggcgtcctactgctccgagctgcagttcttgggcaacccggtgaccaaccacgtccagagcgccgagcagcacaaccaggacgtgaactcgctgggcctcatctcctccaggaagacggcggaggccatcgacatcctcaagctcatgtcctccaccttcctcgtcgcgctctgccaggcgatcgacctgcgccacatcgaggagaacgtcaagggcgccgtcaagacctgcgtcatgacggtcgccaagaagacgctgagcaccaactccaccggcggcctccacgtcgcccgcttctgcgagaaggacctgctcagcgagatcgaccgggaggccgtgttcgcgtacgccgacgacccgtgcagcgccaactacccgctgatgaagaagctccgcagcgtgctcgtcgagcgcgcgctcgccaacggcgccgccgagttcgacgcggagacctccgtgctcgccaaggtcgcgcggttcgaggaggagctccgcgcggcgctgccccgggccgtcgaggccgcgcgcgccgccgtggagagcggcacggcggcggcgcccaacaggatcgccgagtgccgctcgtacccgctctaccggttcgtgcgcgaggagctcggcaccgcctacctcaccggcgagaagacgcggtcgcccggcgaggagctcaacaaggtgctcgtcgcgatcaaccagggcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgcgccactgccaatctgctga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0427400, RefSeq:Os05g0427400