Os05g0426400

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0426400| Description = Conserved hypothetical protein| Version = NM_001187504.1 GI:297724138 GeneID:9271451| Length = 5116 bp| Definition ...")
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Gene Name

Os05g0426400

Description

Conserved hypothetical protein

Version

NM_001187504.1 GI:297724138 GeneID:9271451

Length

5116 bp

Definition

Oryza sativa Japonica Group Os05g0426400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20905333..20910448

Sequence Coding Region

20906296..20906444,20906739..20907376,20907489..20907683,20909458..20909501

Expression

GEO Profiles:Os05g0426400

Genome Context

<gbrowseImage1> name=NC_008398:20905333..20910448 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20905333..20910448 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggatcgctggagacgcggtaccggccggccggagcgccgtctgatgacacaactaagaggaggacccccaaaagtaggatttacaaagatgtcgaaaattttggagttcttgtccttgaaaagaactctggttgcaagttcaaaactttgagatatttgctcctagctatcacttctgcgacgttccttaccctcctaactccaaccttttacgagcatcagttacaaagttctcggtatgtggatgttggttggatatgggacaaaccaagttatgacccacgatatgtatcatctgttgatgttcagtgggaggatgtatataaggcactggaaaatctcaatgatggtagccaaaagctcaaagttggactcttgaattttaacagcactgagtatggatcttgggcacagttgctcccaggaagtgctgtttccattgtaagacttgagcatgccaaagacagtattacttgggacaccctgtatcctgaatggattgatgaggaggaagaaactgatataccggcttgtccatcacttccagatcctaatgttcgaaaaggctcacactttgatgttattgctgtgaaacttccctgcacccgggtgggcggttggtcaagagatgttgcacgactccatttgcagctctcagcagcaaaactggctgtagcctcttcgaaaggcaaccagaaggtccatgtgctatttgttactgactgcttccctattcctaatctcttcccgtgcaagaaccttgtgaaacatgaaggcaatgcttggttgtatagccctgacttaaaggctttaagagaaaagctcaggcttccagttggatcctgcgagcttgctgttccgctcaaagcaaaagactctactcagtggatcgaagaagagaagcatatgctactatcctgcactcagcaagtgaatatgtctgtggtgctatctcagcagctcaaagcattcgccaagcagggtcaactagggatctggttatccttgtcgatgacacgataa</cdnaseq>

Protein Sequence

<aaseq>MGSLETRYRPAGAPSDDTTKRRTPKSRIYKDVENFGVLVLEKNS GCKFKTLRYLLLAITSATFLTLLTPTFYEHQLQSSRYVDVGWIWDKPSYDPRYVSSVD VQWEDVYKALENLNDGSQKLKVGLLNFNSTEYGSWAQLLPGSAVSIVRLEHAKDSITW DTLYPEWIDEEEETDIPACPSLPDPNVRKGSHFDVIAVKLPCTRVGGWSRDVARLHLQ LSAAKLAVASSKGNQKVHVLFVTDCFPIPNLFPCKNLVKHEGNAWLYSPDLKALREKL RLPVGSCELAVPLKAKDSTQWIEEEKHMLLSCTQQVNMSVVLSQQLKAFAKQGQLGIW LSLSMTR</aaseq>

Gene Sequence

<dnaseqindica>4005..4153#3073..3710#2766..2960#948..991#ccagtaatcgccattgccgccgcggctcagtgcgccgcgcattcgctcgcgcttgctcttctgcctcctccttcctccccgcgtgagatgcaatcacgcaattctataaatatataaacgagcttctcctcctcatgagctctcgtagtatataggagtagcctttgtggagagatacagagagaggcagaggagcacaagccgtcactcacctcacctgccttcttcttcatcatcatcttcttcttcttcctcccgcttcgccgattcaggttctccttcgctgcaggtaaccatggcgaccccctttttttccttgtgatttcgtggtgtgttcttggttcttgagttgtgagtgcttgttccattgatggcaccggcatttggttgattcgttgttgccccccccccccccccccaaacacctttttctttattcttttttcggttcgtgttgattctggttctctgatcaacggcagagtagattggttttgtttattggggttcttctccttttttttcttggttttttttgtggtgtcaggctcatgtttgcattgggtctccaactctgcctcttttctcttctttttttttctcctcctcatcttcttttcttgactccaccgttctagcctctccctctcctgttcatggtgtgtaggtgtccgtgctcgcttcttctttttctcatctttttctctctccttttttttctctctccatctggttatctatgttcttcgttgtgccggtggcctgcatgttttacatgacattgccctgctcttgttgttgttgtcgttgtcattgcagatgagaagcggcgcctcggcggcggcggcggcggtgtgattctcctctccagagagagaaagaagagagagagagagagagagagagagagagagagagagaggagaggagaagaagcgtgaccaccgatgggatcgctggagacgcggtaccggccggccggagcgccgtcgtaagatccccccacaatctcttcttcttcttcttcctcgcgccgccgcttcttgccggccggtggagacggtgggcgacggcgacggcgacaatgtcgacgtcgacgtcgacgtcgtcttggttctttcgctcgccgcctcctccactttaattactacttgctgctggtggtgtagtgtagtggttggtggtttaagccctttcgcgagcaacctctgcattagggggtgggcaattgggggtgaattcccgtgcgtgcggtgcggttcaatccaaaatcttgcgatgaacacacgcacgcaacggacagtggcgctcgcattggttaatgcgatcgattgtgttgttaagcgatggagccttcgcatttggttgattgtgttgttcatcaggatttggcgttttgacctcttcgtggaccaaccgctgaatctcttggatgatgcaatggtgccccggtattgttgatgatgatggcatgacatggtcggcgactgactcttgtgggatatgcaagtctgactttgtgccactggttttgtttccccaaaaaaaaaaaaatctttgtgctattagtgctggattgtcactgtgtgacgtgtaggggatgcaggctatggcttatgttgccgtcgggtgatctcagcgttcttggatcatctcatcgcctgtgtgctatactattagtagttgagtggttaggttcctgatttttgtttatgctttgtcaggattatgtttgcttttggttgtcatggttgcgaattctaattcgtgcgtcacaacgggtgttgaagggttgatcctactttgaattttgagttgattgaagccatgtgagtgtgtttggtgcaaagtgaccctttgtgattgtgtagtgatgatttttctgttcctcaaagaagtgtctgatgagtgaagcaggaaggttgtgaaatagatgtccatatgatattttttataagaatatttattagtgctgaggactttgcttttgttgtttcggtttccttattttattgggaaacatcttttagtgtatctcactttcacatccaactagcggatatactgcattttctcctctccttttttttttatagaagaacgcacttttggatacttttaatttggcattgctctgtgtttttgtaattaagtgctttgagtatttttatagcatactcaagggatgatataatagcacttcctgtatataaaaattattccatatctaccttgttgagctaatcattaggggaaagtaggtacctgtgagtgctatttttacgagtgtagctgctacatccttgctgctgtttttaggggtacctttatgcaagatttggttcactgaaacttccatttgtgcctctaaccttttagttaaagcatatgttcttcctatgagaatcctccatttgtgctctgcaaagaggtcctctatcatgcagaaccggtttttgctttgtagtgaccgtgcacttattgtctatatgattgtgatttaaatgaaagtgaaagggattaaaaaggacataatatgcattcatgtagtcgcagagagttcagaaattcacatattgtggaatctgcagctaacttatcatttatttcgctagcattctaggctaagaggaggctaaggctatcaatgagttgacacatttcttttaactaaatcttatttggcaaaagtagtccatttatgtctgaaactctgaatgtttctgaaaatatattgagactgaatatgtttctaccttctgcagtgatgacacaactaagaggaggacccccaaaagtaggatttacaaagatgtcgaaaattttggagttcttgtccttgaaaagaactctggttgcaagttcaaaactttgagatatttgctcctagctatcacttctgcgacgttccttaccctcctaactccaaccttttacgagcatcagttacaaagttctcggtgagcacaacttattcagaagtcccattgaattttcttatatagggtaaaaggaaagccaaatacctacatgctgttattattttctcatgtgaactcattttctctgcaggtatgtggatgttggttggatatgggacaaaccaagttatgacccacgatatgtatcatctgttgatgttcagtgggaggatgtatataaggcactggaaaatctcaatgatggtagccaaaagctcaaagttggactcttgaattttaacagcactgagtatggatcttgggcacagttgctcccaggaagtgctgtttccattgtaagacttgagcatgccaaagacagtattacttgggacaccctgtatcctgaatggattgatgaggaggaagaaactgatataccggcttgtccatcacttccagatcctaatgttcgaaaaggctcacactttgatgttattgctgtgaaacttccctgcacccgggtgggcggttggtcaagagatgttgcacgactccatttgcagctctcagcagcaaaactggctgtagcctcttcgaaaggcaaccagaaggtccatgtgctatttgttactgactgcttccctattcctaatctcttcccgtgcaagaaccttgtgaaacatgaaggcaatgcttggttgtatagccctgacttaaaggctttaagagaaaagctcaggcttccagttggatcctgcgagcttgctgttccgctcaaagcaaaaggttagttgcctttttagttaacaaattttggcctagagttttcaatcttattccacttatggttacctagatcaattgatatgcatgccaagagtcaggcaatctagaatgctgtcattaactaaaacatgtttagaactgttttctgcacatttagaatctaatagtacattgtaaatggcaagtctgtcgtggttatagtctccataaacacatgttaatgtcagcttttagtcttttctgaactgaattagaaactcagtagctaacatttgtttgtattgctgcagcaagactctactcagtggatcgaagaagagaagcatatgctactatcctgcactcagcaagtgaatatgtctgtggtgctatctcagcagctcaaagcattcgccaagcagggtcaactagggatctggttatccttgtcgatgacacgataagtgatcaccaccgaaaaggattggaggctgcaggctggaaggtgagggttatccaaagaatcaggaatccaaaagctgagcgcgatgcttacaatgagtggaactacagcaagttcaggttgtggcagctgaccgactatgacaagatcatattcatagatgctgatctccttatcctgaggaacgtcgacttcctgttcgcgatgccagagatcaccgcaactggcaacaatgcgacactcttcaactccggtgtgatggtcatcgagccgtcaaactgcacattccagctactgatggatcacatcaatgagataacatcgtacaacggcggtgaccaaggatatctgaatgagatattcacatggtggcaccgcatccccaagcacatgaacttcttgaagcatttctgggagggggacgacgattctgcaaaggcgaagaagactgagctgtttggcgcagacccgcctatcctctatgtcctccactacctgggcatgaagccatggctgtgcttcagagactatgactgcaactggaacatccccctgatgcgcgaattcgcaagcgatgtcgcgcacgcccggtggtggaaggtgcatgacaatatgcccgagaagcttcagtcctattgcttgctgagatcaaagctgaaggctgggctggaatgggaacggaggcaggctgagaaggcaaacctggaagatggacattggcggcgaaatatcaccgatccaagactgactatctgctacgagaagttctgctactgggagagcatgctgctgcattggggtgagaagaacccaacgaacaacaaccctgtgccagcgacaatatcaagctcatgatctgtagatagctcaagatattattagtacacaaaaatccatcctatatagcactatacatgcatagaaacagcttgtgtaggttgccatgcttaggcctttccaacac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0426400, RefSeq:Os05g0426400