Os05g0428700

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0428700| Description = Similar to Potassium channel protein ZMK2| Version = NM_001062149.1 GI:115464028 GeneID:4338867| Length = 2979 bp| ...")
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Gene Name

Os05g0428700

Description

Similar to Potassium channel protein ZMK2

Version

NM_001062149.1 GI:115464028 GeneID:4338867

Length

2979 bp

Definition

Oryza sativa Japonica Group Os05g0428700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21046385..21049363

Sequence Coding Region

21046541..21046701,21046806..21047414,21047597..21047672,21047785..21047976,21048174..21048494
,21048936..21049175,21049261..21049362

Expression

GEO Profiles:Os05g0428700

Genome Context

<gbrowseImage1> name=NC_008398:21046385..21049363 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21046385..21049363 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttcaacatcttctacatgctcttcaacctcggcctcaccgcctacctcatcggcaacatgaccaacctcgtcgttgagggcacccgccgtaccatggaattcaggaacagcattcgtgctgcctccaatttcgtgggccggaaccacctgccgcctaggctgaagcagcagatactggcctacatgtgcctcaagttcagggcagagagcctgaaccagcagcagctgatggatcagctccccaaatccatctgcaagggcatctgcgagtacctcttcctccccgtcgtcaaggacgtctacctcttcaagggtgtctcaagagaagtgctccttctcatggttacgaagatgaagccggagtacataccgccgaaggaggacgtgatcgtgcagaacgaggcgccggacgacgtctacatcgtggtgtccggcgaggtggaggtgatctactccgacggcgaagccgaggagcgggtggtggcgacgctggggacgaggggcgtgttcggcgaggtgagcgcgctcagcgaccgcccgcagagcttcacgctgcggacgcggacgctgtgccagctgctgcgcctgcgccaggccgcgctcaaggaggccatgcagagcaagcccgaggacagcgtcgtcatcatcaagaacttcctcaagcatcagatcgagatgcacgacatgaaggtggaggacttgctcggggaggacgccgccggcgagtacgaccacggcaacataccgtgcaatctgctgacggtggcagccaccgggaacagcagcttccttgaggatctcctgaaagttggaatggatcctgacgtcggtgactccaagggaagaactgcactgcatatagcggcatcgaaggggtacgaggactgcgtgctggttctcctcaagcaagcgtgcaacgtaaacatcaaagacgcgcagggcaacacggcgctgtggaacgccatcgccgcgaggcaccacaagatcttcaacatcctgtaccacttcgcgcgcgtctcgagcccgcaccacgccgccggcgacctcctctgcctcgccgcgcgccggggcgacctcgacacgctccgggagctcctcaagcacggcctcgccgtcgactcggaggaccgggacggcgccacggcgctccgcgtcgcgctcgccgagggccacgccgacgtcgccaggctcctcgtcctcaacggcgccagcgtcgacagggcggccagccacaacgagcagcaggcggcggcggcggtgtcggtcgacgagctgcgggagctcatgaagacgcgcgagctcgcgcacccggtcaccatcgtcgtcgactcgccgtcgccggccgccgcagccgtcatccgggaggtcggctcgtcgggggacagccggaatgggcggcgccagagcgcgagatcagacggcgcgcactggccacgggtgagcatatacaggggccatccattcgtcagaaaccgtagctcagaagccggcaagctgatcaacctgcccggcaccatggaagaattcagaatcatcatagaggagaaactgaaagtcgacgcgaggaagacgctgatcatgaacgacgaaggagcggagattgactcgatcgacgtgatccgggacaacgataagctgttcatagtgaccgaggagcatatgacagcagtagcatcgatggactcggtgtctggatcatag</cdnaseq>

Protein Sequence

<aaseq>FNIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIRAASNF VGRNHLPPRLKQQILAYMCLKFRAESLNQQQLMDQLPKSICKGICEYLFLPVVKDVYL FKGVSREVLLLMVTKMKPEYIPPKEDVIVQNEAPDDVYIVVSGEVEVIYSDGEAEERV VATLGTRGVFGEVSALSDRPQSFTLRTRTLCQLLRLRQAALKEAMQSKPEDSVVIIKN FLKHQIEMHDMKVEDLLGEDAAGEYDHGNIPCNLLTVAATGNSSFLEDLLKVGMDPDV GDSKGRTALHIAASKGYEDCVLVLLKQACNVNIKDAQGNTALWNAIAARHHKIFNILY HFARVSSPHHAAGDLLCLAARRGDLDTLRELLKHGLAVDSEDRDGATALRVALAEGHA DVARLLVLNGASVDRAASHNEQQAAAAVSVDELRELMKTRELAHPVTIVVDSPSPAAA AVIREVGSSGDSRNGRRQSARSDGAHWPRVSIYRGHPFVRNRSSEAGKLINLPGTMEE FRIIIEEKLKVDARKTLIMNDEGAEIDSIDVIRDNDKLFIVTEEHMTAVASMDSVSGS </aaseq>

Gene Sequence

<dnaseqindica>2663..2823#1950..2558#1692..1767#1388..1579#870..1190#189..428#2..103#cttcaacatcttctacatgctcttcaacctcggcctcaccgcctacctcatcggcaacatgaccaacctcgtcgttgagggcacccgccgtaccatggaattcgtaagaattcttattactaacctgcatgtgtttgttgagttgcatgtaccgaccagtttaattactctttttttttaacttgtagaggaacagcattcgtgctgcctccaatttcgtgggccggaaccacctgccgcctaggctgaagcagcagatactggcctacatgtgcctcaagttcagggcagagagcctgaaccagcagcagctgatggatcagctccccaaatccatctgcaagggcatctgcgagtacctcttcctccccgtcgtcaaggacgtctacctcttcaagggtgtctcaagagaagtgctccttctcatggtaaccacacacattaaccatactcaattttattcagacaaacaatggatctgtttagatcccacctcaaaattttacaccatatcacattgaacgtttaaacacctgcatgaagtatcaaatataggttaaaaaaaattaatcgcacagattgcaattactttgcgagacgaatcttttaatcctaattactccatgatttgacaatgtggtgctacagtaaacatgcgctaatgacggattaattaggcttaataaatttatctcgcagtttaatgacggatactgtaattattttttttgttagtgcccaaacaccccatgcaacaccctatataacaaccgatgtgacacatcaaaattttacaccctgatctaaacacccccgaagagaagaagattagacaaacaacaatgaggatggatttaattcgtgtgtaggttacgaagatgaagccggagtacataccgccgaaggaggacgtgatcgtgcagaacgaggcgccggacgacgtctacatcgtggtgtccggcgaggtggaggtgatctactccgacggcgaagccgaggagcgggtggtggcgacgctggggacgaggggcgtgttcggcgaggtgagcgcgctcagcgaccgcccgcagagcttcacgctgcggacgcggacgctgtgccagctgctgcgcctgcgccaggccgcgctcaaggaggccatgcagagcaagcccgaggacagcgtcgtcatcatcaagaacttcctcaaggtcggtgaacatgtacaccgtcgtcttttttttttcacgaacacgcaaaagaattgtacgaatacacattaatatattagaagaaaaaaagttttagttacacaaatgtacaccgtcgtcccacggtgatcagactcatccatggattggattccgagcaaactactgaactgagatgtgtggtttgtggtgtgcagcatcagatcgagatgcacgacatgaaggtggaggacttgctcggggaggacgccgccggcgagtacgaccacggcaacataccgtgcaatctgctgacggtggcagccaccgggaacagcagcttccttgaggatctcctgaaagttggaatggatcctgacgtcggtgactccaagggaagaactgcactggtaaggctagtactgggccctctcgaccaaaagaatacattcaaactctcaaatttagacttgaatccgaaatttgaatcgaatttactaatttgggccctgttcttgtcagcatatagcggcatcgaaggggtacgaggactgcgtgctggttctcctcaagcaagcgtgcaacgtaaacatcaaaggtaaaaaacatcccaaatctcgtaattagcgtatctcgtactccctttgcctaaaatataagaacaaaagattggatgagacgtttcctaatactacgaatttggataaacgtcatatccaattttaaattcttgtattttaggacggtgacaggtttgatcctgtgatgtgatttctgcagacgcgcagggcaacacggcgctgtggaacgccatcgccgcgaggcaccacaagatcttcaacatcctgtaccacttcgcgcgcgtctcgagcccgcaccacgccgccggcgacctcctctgcctcgccgcgcgccggggcgacctcgacacgctccgggagctcctcaagcacggcctcgccgtcgactcggaggaccgggacggcgccacggcgctccgcgtcgcgctcgccgagggccacgccgacgtcgccaggctcctcgtcctcaacggcgccagcgtcgacagggcggccagccacaacgagcagcaggcggcggcggcggtgtcggtcgacgagctgcgggagctcatgaagacgcgcgagctcgcgcacccggtcaccatcgtcgtcgactcgccgtcgccggccgccgcagccgtcatccgggaggtcggctcgtcgggggacagccggaatgggcggcgccagagcgcgagatcagacggcgcgcactggccacgggtgagcatatacaggggccatccattcgtcagaaaccgtagctcagaagccggcaagctgatcaacctgcccggcaccatggaagaattcagaatcatcataggtaaaattcagaaaccatgtagaagtagctatctgaatcttgctgcaattgcaagatcgtgcagttcaaactaaccgatgatttctgctcctttttcttttcagaggagaaactgaaagtcgacgcgaggaagacgctgatcatgaacgacgaaggagcggagattgactcgatcgacgtgatccgggacaacgataagctgttcatagtgaccgaggagcatatgacagcagtagcatcgatggactcggtgtctggatcatagcatattcgagtttgctgaataaggccttgtccagcttggagggatttgagtgggaatgtttttgcatcacaataggtgtaaaactagtctccccaatctgttccttttaggattaaccgaacaaagcctaatcaagttttctattggcgacaatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0428700, RefSeq:Os05g0428700