Os05g0430300

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0430300| Description = Protein of unknown function DUF668 family protein| Version = NM_001062158.1 GI:115464046 GeneID:4338876| Length = 59...")
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Gene Name

Os05g0430300

Description

Protein of unknown function DUF668 family protein

Version

NM_001062158.1 GI:115464046 GeneID:4338876

Length

5969 bp

Definition

Oryza sativa Japonica Group Os05g0430300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21127627..21133595

Sequence Coding Region

21128229..21128537,21129314..21129633,21129780..21129872,21129952..21130042,21130883..21130970
,21131384..21131481,21131663..21131732,21131843..21131943,21132263..21132379
,21132473..21132549,21132647..21132691,21132772..21133285

Expression

GEO Profiles:Os05g0430300

Genome Context

<gbrowseImage1> name=NC_008398:21127627..21133595 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21127627..21133595 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtggcctctgctcaaaggtttcagcggtagacaagtccccgagcgacaccacgcttgttcgggaccagatagttgatcctgagcctgccttgacaaagcgggctaagtcgcctgtggttgaagaggcaacggcgaagcgggtggaagaccagcagcagtcttttgcattcttggagagcgttgttcccgggcttgctgtttacaatggtgcagatgccggtcaggccgggtctaggacaccacaactggcccggactctgtcgcagaaggctggtttgggcaagactaaggccggtgctgcaaaggtttcagaagtgagctcccttttaggcagggctggcactgttggtcttggaaaagcagtggaggttctagatacgcttggtagtagcatgtcaagtttaaatactagcagtggttttatatcggcagcaaagggagataaaatatctattttggctttcgaggtggcaaatactattgttaaaggttccaatctaatgcgtgcactctcaaagaccaacataaagcacctcaaagaagtggtgctttattcagaaggtgttcaacaccttatatccaaagatatggatgaattacacaagattgcagcaactgacaaaagggaagagttagaaatcttttcaaaagaagttgttcgatttggaaatcgttgcaagaatcctcaatggcacagcttggaccgctactttgaaaaattggcatcggaacgaactcctcagcatcgcctgaaagaagatgcagaatcagtgatgcagcaattgattatttgtgtgcaatatacagctgaattatatcatgaattgcatactttggatagatttgaacaagactgtcgtcgtaaacagcaagaactggatggtttgggttcaagaggtgatagtctgcatatgctaaagcaggatgtcaagagtcaaactaagcatgttaaaagtctgaagaagaggtcactttggtccaagaatttggaagaggtgatggaaaagctcgtagacattgttcatttcttacatttggagatcaataatgcctttggcctcgctgacagtgaagcgccacaagaaccagctaaacaccacaatagattgggaccagcaggccttgcattgcattatgcaaatatcatcaatcagattgatactcttgtttctcgatcaagtttgatccctcccactacaagggatacactataccaaggtttgccactgactatcaaatcagctctccgttcgaagctacaatcctttgaactcaaagaagagcttacagcttctcaaatcaaagctgaaatggagaagactttgcgatggcttgtccctattgcaaataatacaacgaaagcacaccatggcttcggttgggttggagagtgggcaaatacaggatctgagctgaactgcaagctatcagggcagatggacttaacccgaatcgaaacactatatcatgctgagaaggaaaaggttgatggccatatccttgagcttgtcgtgtggctccatcatctcatcagtaaatccaaaaatgccaatggaggtgtaaggtctcccatcaagtctcccgtccgttcaccaacacaaaagggtatcaccttgatgccagacaagtcgaacagttcatcgccaatcctcacacaagaggataaggatatgctgaagaatgttaagttccggaaattcgtccctggaataagcaagagtcaagagtttgacacaaagtcaagacatagcaaacagattagactgataaagagcaacagtcaatctccaaccagtggcagtaggaaagacatgctttcactcaggagatcatccatgcttcctgtcatcgacttccagatggataggaccaaagctttggacttaatcgaccggcttgatggtctgaaaaaacaatga</cdnaseq>

Protein Sequence

<aaseq>MGGLCSKVSAVDKSPSDTTLVRDQIVDPEPALTKRAKSPVVEEA TAKRVEDQQQSFAFLESVVPGLAVYNGADAGQAGSRTPQLARTLSQKAGLGKTKAGAA KVSEVSSLLGRAGTVGLGKAVEVLDTLGSSMSSLNTSSGFISAAKGDKISILAFEVAN TIVKGSNLMRALSKTNIKHLKEVVLYSEGVQHLISKDMDELHKIAATDKREELEIFSK EVVRFGNRCKNPQWHSLDRYFEKLASERTPQHRLKEDAESVMQQLIICVQYTAELYHE LHTLDRFEQDCRRKQQELDGLGSRGDSLHMLKQDVKSQTKHVKSLKKRSLWSKNLEEV MEKLVDIVHFLHLEINNAFGLADSEAPQEPAKHHNRLGPAGLALHYANIINQIDTLVS RSSLIPPTTRDTLYQGLPLTIKSALRSKLQSFELKEELTASQIKAEMEKTLRWLVPIA NNTTKAHHGFGWVGEWANTGSELNCKLSGQMDLTRIETLYHAEKEKVDGHILELVVWL HHLISKSKNANGGVRSPIKSPVRSPTQKGITLMPDKSNSSSPILTQEDKDMLKNVKFR KFVPGISKSQEFDTKSRHSKQIRLIKSNSQSPTSGSRKDMLSLRRSSMLPVIDFQMDR TKALDLIDRLDGLKKQ</aaseq>

Gene Sequence

<dnaseqindica>603..911#1688..2007#2154..2246#2326..2416#3257..3344#3758..3855#4037..4106#4217..4317#4637..4753#4847..4923#5021..5065#5146..5659#ggcttgacctgctgcgccgccggagttgagtagactctgctactacttgcttcaccggctcaccgcaacagcacccagaaaaaaaaaaaagctctcctcgttcgtctcctcctcctccccttctcattcccaaaatccaccaaatcccggcagcaaggcgcgatctctggcgcttccgcggttcgcgcgatccccgatcggtccgcgccaggttcgttgctgcagcttttgacgctcaaattacagggaaaagatctcacatcttttgctgatgacgaattgtgcggcttggcttctgcaggggcgctggtttcatggattggagttgctgggacggctcttcgtgggaaccctcgtgctgacctgattcgtttgggcgtggttgatttgggtcttagtttttggtggactttgagtccctttgcgggtggttcttgtttgtaggctgtgattggggaatcctgggaggttgtaggaatgggattatctagattgctgtaaatagaggtgaagacaattcttttaggtactaatttggtgcacataaggtgagaattttggttaggactaggtggagatcaggattattgttagggaaggggatgggtggcctctgctcaaaggtttcagcggtagacaagtccccgagcgacaccacgcttgttcgggaccagatagttgatcctgagcctgccttgacaaagcgggctaagtcgcctgtggttgaagaggcaacggcgaagcgggtggaagaccagcagcagtcttttgcattcttggagagcgttgttcccgggcttgctgtttacaatggtgcagatgccggtcaggccgggtctaggacaccacaactggcccggactctgtcgcagaaggctggtttgggcaagactaaggccggtgctgcaaaggttggaaggatattcttatgccatttatttaacttacgatgaattagtccgcaatgtagcacatattgttaactgccagtgtgttaggtcgcagtgatatttgttattcctatggtgttatagagatatcaacagaatcgttatcgttcagttggtatataactatcctttgaccatttttaatctctgtatgcctctccttctgaagttggagcactcattgaccaaccatgattgtgagttgtgactagtggtaattactggcaaagtggcaattagttgcaattttcattacaaccataaaaagatctcacttactagctaaataccatctcagcatatcctgcatgtaagtaccaaaaacaactttcatgtcatctcatacagtaaactcaacagcgatctgcattgcttcatgcagaatctgttcattgttcccacactgtcccaaaactgttcttaattttcccttatttgaactttgaatggtctattgggattacttttctagtctgcatatgtttcaatgaaaacaatccagctattgttttgacaatggctattgtatatatatatccagaaaagatgcagttttaataatcctgttcttgttatgtaatttgacagactattccttattgtacatttcccttcaagtgctttgaaccttgattcgatgacagattttttatctaccattattaatttttcaatctatcattcttaatggttttaatctagaaaaaaatcagtcttaatgcttacttgctaaacaggtttcagaagtgagctcccttttaggcagggctggcactgttggtcttggaaaagcagtggaggttctagatacgcttggtagtagcatgtcaagtttaaatactagcagtggttttatatcggcagcaaagggagataaaatatctattttggctttcgaggtggcaaatactattgttaaaggttccaatctaatgcgtgcactctcaaagaccaacataaagcacctcaaagaagtggtgctttattcagaaggtgttcaacaccttatatccaaagatatggatgaattacacaagattgcagcaactgacaaaaggtaaataatggttttgtgctccccagtcttttctatcatgcccattataaatattatcctaccagatatgtatccaggttactgtactataacctttcttttaatgttgtaagttgtatcaagtgctaattgtttggttctaacagggaagagttagaaatcttttcaaaagaagttgttcgatttggaaatcgttgcaagaatcctcaatggcacagcttggaccgctactttgaaaagtgcagtttgatttctgccttgtatttaatgaaggtttattttaaggcactaatttattttttgtattgattatactagattggcatcggaacgaactcctcagcatcgcctgaaagaagatgcagaatcagtgatgcagcaattgattatttgtgtgcaatatacagctgtaaggattaacaaacccattagaaagattgcatatgctcacatttaggcagtctcaattcaaattttgcagccccaaagtaattttttagctctaaagtaacaaaaaaaaaaaaactttgtagcattctctgccagatttttttttctttttggctgagaatctgtgggtctttgtagttgttaacatttatatttgttccatagctcagagtttttgcaataggtttggtattttactgctacagtcctctgattctaaacgccattaatcctagaaggctagaacagatgaagaaacccttttggttttatccataatgaaatatacggttttatgcatcatgaaatacacgtttattaaataacttttgagtttgcaacagaacattatggtggaaaatagcactcattagtagtatctgcattcttttttgttttacatcctaacaatgggtacagtgggtatttttaacttggaccactaatattagtaatagtaacatacactagttcattcattcatgtcacaagaaaatgatactgatagatttgtcaccatatttctttgttagcatcatatccttaaatttcagtgtgcttccatttaattagaaacaaaaatgacctccaagcatggctatttgagactgtcgatgttggaaatgacaaagtagaggcagtagtatacttttatttggatcctaacatccttaataagattgagatttgttggtatttagcaccgtttgccttctgtgcactgattcgtgttatttctggacttctggttatagatttcacatcactgactcgcttctctttctttcttttctcctaggaattatatcatgaattgcatactttggatagatttgaacaagactgtcgtcgtaaacagcaagaactggatggtttgggttcaagaggtcagttttgtttctgttttatgaactgtacttaaactcatgtggcctgactgcactataaacaactttgtgtgtcatatgaaacactcagctccagttctttagttatttgaggagcaaggcggttatatatttatgctcccttttgtgaatatacagttatagttttctagttcagtaattcttatgttgtcatctatcagactactgttcctttcctcaaaatattatccccatggtagtcctttaatttttcgttttgatgaataaaagttaaaacatagaacttaccatgcacgtcaaggatttgtaagtagaattaaaattaccttacttgtaatgactgtatggataaattgatattttgactttgtttctaatgaactaaggtagaaatttctgttcattttcaggtgatagtctgcatatgctaaagcaggatgtcaagagtcaaactaagcatgttaaaagtctgaagaagaggtcactttggtccaagaatttggaagaggtttgtagtagtttctttgtttataaaatgttggttcaaggaaggcattgggtactacaacgagtacatgtttgaacacaccgaccgcactacgcacatattctattgtcatatcattctttaaatttttagtaaaaaaaaccattctttaaatgctgaaaaatattatgcttttccacaggtgatggaaaagctcgtagacattgttcatttcttacatttggagatcaataatgcctttggcctcgctggtataattttattgtcacgttcttcgcaaaaggcttcataattattagcattacataattatatttgttgtgacaatgatatagaagctcttgctactatctgactgcagacagtgaagcgccacaagaaccagctaaacaccacaatagattgggaccagcaggccttgcattgcattatgcaaatatcatcaatcagattgatactcttgtaagttcacaaaatctgcttaacattctaaatttttaattactattttgtcatctagaagataaatcaaccaatatttcaacaccagcaatgtcatgagttgccaatgcaaatatacatgacaagtcccatgtatgagtatagattctgttagagaattgagccttacttttacgatgatcgtaaatcaattgtaattttcttatgaaatataatcaatagcaatttgcaatatttcaatctcaaccatgtataccaacttcatgtggttattgcctgttggcaaacaatatcttaacgaggattgatcaactggcaggtttctcgatcaagtttgatccctcccactacaagggatacactataccaaggtttgccactgactatcaaatcagctctccgttcgaagctacaatcctttgaactcaaagaagaggtatgctaggcaggttaacacttgcagattgctattattatgagtgtacatatatgtctgacatgataacatggttgtgctaaatggatgcagcttacagcttctcaaatcaaagctgaaatggagaagactttgcgatggcttgtccctattgcaaataatacaacgaagtaatatatcctatccttgcatgcctgtgacctcattacttacaattgcaaaaactatccatttcttactgagaatatgattgtctgttcaccccagagcacaccatggcttcggttgggttggagagtgggcaaatacagggtttgtgtctgactacaaacgttttgaataaaaatgaagaaactattacttctcagtgacaatctgattattctatgcagatctgagctgaactgcaagctatcagggcagatggacttaacccgaatcgaaacactatatcatgctgagaaggaaaaggttgatggccatatccttgagcttgtcgtgtggctccatcatctcatcagtaaatccaaaaatgccaatggaggtgtaaggtctcccatcaagtctcccgtccgttcaccaacacaaaagggtatcaccttgatgccagacaagtcgaacagttcatcgccaatcctcacacaagaggataaggatatgctgaagaatgttaagttccggaaattcgtccctggaataagcaagagtcaagagtttgacacaaagtcaagacatagcaaacagattagactgataaagagcaacagtcaatctccaaccagtggcagtaggaaagacatgctttcactcaggagatcatccatgcttcctgtcatcgacttccagatggataggaccaaagctttggacttaatcgaccggcttgatggtctgaaaaaacaatgaggaatcatgaagctgtttaagaacatgaacctgaaaatgggcagtcgtttgtctatcttgaaatccatagccccagcaaagatgtcgaaaattggcgttaaactgcagcaatgccgcccgtctgaggtgaagaacaagcagtatgccaattgccaaacaagcagtacgcccgtcttggcgctgtgagtaatcagttgtagctaaaaattgtatcatataccttgtactgaagaaaaggaactgatgtacaaaacatttctttagttgattctgcctgtacaagaaatgcaagtttgttctttgttttaac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0430300, RefSeq:Os05g0430300