Os05g0433000

From RiceWiki
Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0433000| Description = Similar to Serine/threonine-protein kinase SAPK4 (EC 2.7.1.37) (Osmotic stress/abscisic acid-activated protein kinase ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0433000

Description

Similar to Serine/threonine-protein kinase SAPK4 (EC 2.7.1.37) (Osmotic stress/abscisic acid-activated protein kinase 4)

Version

NM_001187512.1 GI:297724154 GeneID:9266195

Length

6185 bp

Definition

Oryza sativa Japonica Group Os05g0433000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21231656..21237840

Sequence Coding Region

21231656..21231997,21232175..21232273,21236419..21236511,21236858..21236911,21236999..21237100
,21237505..21237579,21237718..21237840

Expression

GEO Profiles:Os05g0433000

Genome Context

<gbrowseImage1> name=NC_008398:21231656..21237840 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21231656..21237840 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacacgtacgaggaggtgcggagcatcgggtcaggcaacttcggggtgacacggctgatgtgcaaccgcgacaccggggagctcgtcgccgtcaagaccatcccacgcggcaatcaccggattaacaagagcgcgtaccgggagatcatcaaccaccgttcgctgcggcacccaaacatcatccagttcatagaggcgatcctaactcatacacatcttgcaatcgtgatggagtatgcatctggtggagaactctttgatcggattgtcgatcttgagcgatttagtgaggatgaggccagatatttcttccagcaattgatttggggtgtaagctattgccatcacatgtcatcaatgttgcattcaaggcccaaatcagcagttgggactccggcatatattgcaccagagatactaaacctccaggagtatgatgggaagctaataaaagcaattcaatatgagataccacagcaagtccacatatctactgattgcagagaactcatatcacgaatctttgtcagtgatccatcgaagagaatcaccatgcaggaaataaagaaccatccatggttcttgaagaatttcccgagggagctcacagaagaggcacaatctatctacttcacaaagaatgactatttccctactttctcagcccaaactagtggagaaatcatgactttcatggaagaagcgcagaaaatacccaaatcattcggcgatggctatattgattacagatcagatgaagaggaaatgcaggaagaggaggaggggccagaagagaacgaggaagaggaagatgaatgtgacaagattctaagggaggtccaagagaaggaaactccgaatatgaaagcacttagcatcggctag</cdnaseq>

Protein Sequence

<aaseq>MDTYEEVRSIGSGNFGVTRLMCNRDTGELVAVKTIPRGNHRINK SAYREIINHRSLRHPNIIQFIEAILTHTHLAIVMEYASGGELFDRIVDLERFSEDEAR YFFQQLIWGVSYCHHMSSMLHSRPKSAVGTPAYIAPEILNLQEYDGKLIKAIQYEIPQ QVHISTDCRELISRIFVSDPSKRITMQEIKNHPWFLKNFPRELTEEAQSIYFTKNDYF PTFSAQTSGEIMTFMEEAQKIPKSFGDGYIDYRSDEEEMQEEEEGPEENEEEEDECDK ILREVQEKETPNMKALSIG</aaseq>

Gene Sequence

<dnaseqindica>5844..6185#5568..5666#1330..1422#930..983#741..842#262..336#1..123#atggacacgtacgaggaggtgcggagcatcgggtcaggcaacttcggggtgacacggctgatgtgcaaccgcgacaccggggagctcgtcgccgtcaagaccatcccacgcggcaatcaccgggtccgagtccttctaccctcttcactagcgtaatagggttttggggttgtaggctggggtttggtgggtcttgctcgtgtggatccggtggccaacatttggttgttctgatggggctttggattggtttttgcgcagattaacaagagcgcgtaccgggagatcatcaaccaccgttcgctgcggcacccaaacatcatccagttcatagaggtgtgtatctattgttgtcttgttgatgaggagcaaacatttttggtttagaaaaaataggagcagatagtcagggattgttcactcattgttttgtccgtctgggttaattgtctgctatgccatgatttactagtttcttgagcatgaatattgaatgggtaaggattcgattttgtattttttttcctccctagtttgatgggttttggtgatgtgttttctatttgaaggtgacaattgtggaatgtaccatgtttcttcttcattctaatcactttatggtttaatctcggttttatgggtgcatttaagtttgatctccttttgatcttactcctttctctcataatcccatgccgtgtggaacaaaataaacaatgctttgttttcaatttgcacaggcgatcctaactcatacacatcttgcaatcgtgatggagtatgcatctggtggagaactctttgatcggattgtcgatcttgagcgatttagtgaggatgaggtcacaatatataatctctggttttgatttcaataatattttttaaagttttatgcttctaaagtttgtttcttctactcaatgcaggccagatatttcttccagcaattgatttggggtgtaagctattgccatcacatggtatggataaacaataaattggtcttatcttatcagcacattcaataatctaatgttccatgttgctctgtagtatgtgtagtagaaactgctagtatgttttctcaaataacgtgagtgggacctgaaaaaatgcttaaatattgcaaccatcttcgctactttctagaaaatatgccatagagatttgaagctggagaatgttctcttggatggcagcgcagctccgcgcctgaagatatgtgattttgggtactccaaggttgtctccaattattcagagtttgctcatgcttttagttcttttttagtttgaacaggaataattgtttgccatttctaacagtcatcaatgttgcattcaaggcccaaatcagcagttgggactccggcatatattgcaccagagatactaaacctccaggagtatgatgggaaggtgagttaaatagcttcttgtttacctatgatatgtactttgatgtttctttggtaacatttatcagaagcacgtcatttatcttggttccatatatggcttattttcttattttcctttcattatggcatgcatattaatactttccatgtcagcaaaaacctggaactggaagtacaagttgattatttagatatagaattattactttctaagcactttggcattgcctaattaacctagactattgcacagatatggtttgatgtaccaagaaccatcacattagcaagccatatgcgaataatggtatacgttcatgtgctttcatcacaagaatagttttgacttacagagtatgatatcgtttctagtttcaacacagttactattgattgaatcatggtactagttacactaactaaaattgacaaattgtggatgaccttgtcattgttttttttccctttgagataggtttagttcctgtgtgtatagcatgttagattcttcttgaagatgattttggagtaatgttgtaaacaagagagaagttcaaccagcgttagtgtgctatactctactatgatctcttaattcatagtacagttacacagttttggaaagataagcactgcagggctgaaatgaacttttagtaatgatttaactgattggttgcatactttgttatcaccaattgaaaactcagatagaagatatatctcttactttacaatggtactcctgtgtcacaccctgaatttcttttcccaagcctaaattgaatttataaatcgcctagagaaaatatcagtgtaaaagcaagagagaaaccctaataaattaatgcaaataataatcagaattggcatgtggaatttttcttgagttctacatgtcgaaatatgctaacaagatttttagtggaattttcaaagctctagaaataattttaaccaattaaaaacgagcacaagcagtatttaatcccaggaaaattcatttccttcttttttttttctttttcctttttccctccttttcccaatgggccgccagcccatattcctccccctccccgctgggccggccgaaggccacggcccagccggccgcccgagcccccctcctctctcccagggtcaccgacaagtggggcccacctgtcgggtcctcccccaacctccagtcgccgccgcgcatcccgcaaccaccgccgccccctcgctcccgtgcctcccgggcaacgttgcccacatcgccgcccgcgcccgccttccccgcgcccactccctctctttcccgcccgcgcccgcgctcgagacgtccaggattcaatttttgaatcccgcctctctctcctctccccctctccccactccaccggcgaaatcgcggccatcccggccacgatcaacccttgcgagcctatataaagcacccccgctctcccctctctctttttctccatttcgccgagctctcatgtgccctctatcgccctagcgccgtcgccctcctctccaccgctgtcgccgccgctccggtagccgctagccgccgcgccgagccgtgccgttgccgccgtcgggttcgcaagcccaagggccacgccgtctgcctctccgccaccgctttccgccgcgggaaccccgttcgcaccgcgcgccggtgagctccgccatggctgccgccttcggccggcgtcctcgccctcttccatcttcctctctctctctctctctctaacccctttcttcgtgttcgctaggtggttccggagctcgtcccgtcgtcgccatcgccctccgtcgctcgccatcgtcaatcgtcgtcggtgaggcccctcctcctcttcctctctctctctctctctctcaccgcttagccgccgctgtcgccgtccgcgtcgccacgacaccgccgccagctgatcgccgccttgcgccgccgccgtgcgccatggccgccgggccggcttgagccgcccgtgcgcgccggccacgcgctcccgccgccgtccgatctaccctcgggtagatcggggccatccaaccccgccgcccgcgtggctgccatgtggccgccacgtgtgcgccgtgtcgacgccacgtgtgcaccacgtggtgcgctgctccttccccggtccgtggacccggtccaccgcggaccgccctccccccgagtcactgccaagtggggcccgcatgtcgacgccgccctctctctccccgggattttaattattgcgcaataaatcaattaaggatttttctggttatagtaaaaacacagcgaatcttctaaaattcatatctaattcatccgagctccgtttaagcccattcaagtctcagtaaatcaagaaaagtgcatagaatccattaaaaatggttttgttcgctgttttagtagtcttatagcatgtttgtattatttgctttgtatgtcgcttagattccggctctcccgacgctccggtgtactttgaaatagtcgccgaggttcctccagcagcagagaaggcaagtcatgcttgtcacttgaacatgttgatcctatattgcaaatgctctaccgttttcctttaaatactgcattgttttataatgatactatgggatgtttacctactgttacagccatgctacttttgtaccatgctcctttgttagcttgggatataacatgactaaagattggactagggattgcttagccatgcttagttcaactagcacaccgtgggggaaatcacattaatgcatagacttcaggttctagtgttggtgttggattaaagccgccgtcctggtgttagtcaattaaaatataccttatggtgggctgtgggtgcatggttttgatggtcgcgcccatggcacttaaggaccggttcgcgggaaaccctggaagaattcctcgtacttaccacaagccagcgtgggcaacggctgggcttgtagtgtagctttcctctagttgactcatccaggcaagggtgtgcgtgatggagcggggcgggccctgcgacggcctctgtcgcttccggattcacctaggcacgagaggggactgcccgttgcccgctggggacgggggtgaaacctgaggtgtggtgtgcttggctagagggggttatgcgaagggtcctgtcacggcctctttccggtatgtcgtggtggcatgtcggcacacggaaacgtgtcgtggggctgtgtcttgtgggtacagttgtacacctctgatcagagtgaaactattcgaatagccgtgcccgcggttatgagcggtcaaccagattcaccgtgattagcctcaccctagtctagtgtaatggaattgattagttcaggtggatggtggggcctgttgcaacgtggtgtagcgttggacagtggatggttaatattgagtaattattacaactgatttactgctttcaactaccgtctttaaatgctcgctttatgcaaatgaaccgctcaagctgtccttcaattatatcctgcatcataccctctattccggtatgacttgctgagtacggtggttgtactcagtcttgctctatttttccccaaacccccagagtttgagtgcgtgtcagatggtgggttctccgaggagtaggcttcgtccgtgctgtcgaggatgcatgtggagtggtgttcccgctgcagtccaagtcaaggcttagctccatttatcttttaattttccgctgcatttatgtaagacttttataatgtttgtaagacgtggatctgtatgtcgactttgtcgtttgtgtaccccggccggtcctcgacgggggttttaatgcacattttgcttggaattctattcgggaatttctgggcgtgacatcctgttttttagacagcacagttaattaattagtgacaagtgtatttttatattgtagcttgcagatgtatggtcgtgtggggttactctctatgtcatgcttgtgggggcctactcattgaagacaaggatgatcccaagaatattatgaagaccgtcaaggtgatagctcagtcctataatctcatggatatatttcattggcatttctgtgaatatatttgcggtcttgtttacactcatgaattccggcggcttatcttcgtttgcagctaataaaagcaattcaatatgagataccacagcaagtccacatatctactgattgcagagaactcatatcacgaatctttgtcagtgatccatcgaaggtaatgaacgcaagttaacatttatctcggtttccatattgatatccataagtgactttattttcatgtggtgattaattatggcatgtggtaaaccatactagtgaatgagccatatcgagctgtggtcttactctagaactcaagttcgatgagctcttttcttttcctgtatagagaatcaccatgcaggaaataaagaaccatccatggttcttgaagaatttcccgagggagctcacagaagaggcacaatctatctacttcacaaagaatgactatttccctactttctcagcccaaactagtggagaaatcatgactttcatggaagaagcgcagaaaatacccaaatcattcggcgatggctatattgattacagatcagatgaagaggaaatgcaggaagaggaggaggggccagaagagaacgaggaagaggaagatgaatgtgacaagattctaagggaggtccaagagaaggaaactccgaatatgaaagcacttagcatcggctag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0433000, RefSeq:Os05g0433000