Os05g0435800

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Revision as of 10:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0435800| Description = Similar to Subtilisin-like protease| Version = NM_001062181.1 GI:115464092 GeneID:4338899| Length = 2539 bp| Defini...")
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Gene Name

Os05g0435800

Description

Similar to Subtilisin-like protease

Version

NM_001062181.1 GI:115464092 GeneID:4338899

Length

2539 bp

Definition

Oryza sativa Japonica Group Os05g0435800, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21332559..21335097

Sequence Coding Region

21332769..21335054

Expression

GEO Profiles:Os05g0435800

Genome Context

<gbrowseImage1> name=NC_008398:21332559..21335097 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21332559..21335097 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccgccgtcgtacccgggatttgccacgcggtggcgttgatgtggcttcttctcgtgttgttttgctgggcgccggggttgacgtcggcggccgatacggcggcgtacattgtgcacatggacaagtcggccatgccgagggcgttcgccagccaggcgagctggtacgagtccaccctcgccgcggcggcgcccggggccgacatgttctacgtgtacgacaacgccatgcacggcttcgcggcgcgggtgaccgcggacgagctggagaagctgagggggtccaggggcttcgtgtcgtgctaccccgacgacgcgagggcggtgaggcgtgacacgacgcacacgccggagttcctcggcgtcagcgcgtcgtcgggcgggctgtgggaggcgtcggagtacggcgaggacgtcatcgtcggcgtggtggacacgggcgtgtggcccgagagcgcgagcttccgcgacgacgggctcccgccggtgccggcacggtggaagggctactgcgagtccggcacggcgttcgacgccgggaaggtgtgcaaccggaagctcgtcggcgcgcgcaagttcaacaaggggctcgtcgcggcgaccaacctgaccatcgccgtcaactccccgcgcgacaccgacgggcacggcacgcacacgtcgtccacggccgcgggctcgcccgtggcgggcgcgtcgttcttcggctacgcgcccggcaccgcgcgcggcatggcgccccgcgccagggtggccatgtacaaggccctgtgggacgaaggcacgtacccgtccgacatactcgccgccatagaccaggccatcgccgacggcgtcgacgtcctctccctctcccttggcctgaacgacgtcccgttctaccgagaccccatcgccatcggcgccttcgcggcgatgcagcgcggcgtgttcgtgtcaacctcggccggtaacgacggccccgaccccggcttcctccacaacggcacgccgtggacgctcaccgtcgcgtcgggcacgggcgaccgggagttcgccggcatcgtcaggctcggcgacggcacgaccgtcattggccagtcaatgtacccaggcagcccgagcaccatcgcgagctccgggttcgtcttcctcggcgcgtgcgacaacgacacggcgctcgcgagaaaccgcgacaaggtcgtgctctgcgacgccacggactccctcagcgccgccattttcgcggtgcaggtcgccaaggcgcgcgccgggctgttcctctccaacgactcgttcagggagctctccgagcacttcaccttccccggcgtgatactgagcccgcaggatgcccccgcgctgctgcagtacatcaagaggagccgcgcgcccagggcgtcgatcaagttcggggtgaccatcctgggcaccaagccggcgccggtggtggcgacgtactcgtcgcgcggcccgtcggcgagctgcccgacggtgctcaaacccgacgtgctcgcgccgggctctctcatcctcgcctcgtggccggagaacgtcagcgtctccaccgttgggagccagcagctgtacagccgcttcaacgtcatctccggcacgtccatgtcgtgcccgcacgcgtccggggtggcggcgctgatcaaggccgtgcacccggagtggagccccgccgcggtgcggtcggcgatgatgacgacggcgagcgcggtggacaacaccaacgcgcccatcaaggacatggggcgggccaaccgcggcgcgacgccgctggcgatgggctcgggacacatcgaccccaaccgcgccgtggacccgggcctcgtctacgacgccggggccgacgactacgtcaagctcatgtgcgccatgaactacacggcggcgcagatcaagaccgtggcgcagtcgccgtcctccgccgtggactgcgccggcgcgaccctggacctcaactacccgtcgttcatcgcgttcttcgaccccggcgccaccgccccggccgcgaggacgttcaccagggcggtgaccaacgtcggcgacgcgccggcgagctacagcgccaaggtgaagggcctgggcgggctgacggtgagcgtctcgccggagaggctggtcttcggccgcaagcacgagacgcagaagtacacggtggtgatccgcgggcagatgaagaacaagaccgacgaggtgctccatgggtcgctgacgtgggtcgacgacgccggcaagtacacggtgaggagcccgattgtggcgacgacggcgagctcggctccgctatag</cdnaseq>

Protein Sequence

<aaseq>MATAVVPGICHAVALMWLLLVLFCWAPGLTSAADTAAYIVHMDK SAMPRAFASQASWYESTLAAAAPGADMFYVYDNAMHGFAARVTADELEKLRGSRGFVS CYPDDARAVRRDTTHTPEFLGVSASSGGLWEASEYGEDVIVGVVDTGVWPESASFRDD GLPPVPARWKGYCESGTAFDAGKVCNRKLVGARKFNKGLVAATNLTIAVNSPRDTDGH GTHTSSTAAGSPVAGASFFGYAPGTARGMAPRARVAMYKALWDEGTYPSDILAAIDQA IADGVDVLSLSLGLNDVPFYRDPIAIGAFAAMQRGVFVSTSAGNDGPDPGFLHNGTPW TLTVASGTGDREFAGIVRLGDGTTVIGQSMYPGSPSTIASSGFVFLGACDNDTALARN RDKVVLCDATDSLSAAIFAVQVAKARAGLFLSNDSFRELSEHFTFPGVILSPQDAPAL LQYIKRSRAPRASIKFGVTILGTKPAPVVATYSSRGPSASCPTVLKPDVLAPGSLILA SWPENVSVSTVGSQQLYSRFNVISGTSMSCPHASGVAALIKAVHPEWSPAAVRSAMMT TASAVDNTNAPIKDMGRANRGATPLAMGSGHIDPNRAVDPGLVYDAGADDYVKLMCAM NYTAAQIKTVAQSPSSAVDCAGATLDLNYPSFIAFFDPGATAPAARTFTRAVTNVGDA PASYSAKVKGLGGLTVSVSPERLVFGRKHETQKYTVVIRGQMKNKTDEVLHGSLTWVD DAGKYTVRSPIVATTASSAPL</aaseq>

Gene Sequence

<dnaseqindica>44..2329#gtgtaccacggtcgcgtcgacgtgccggagttcatcgccggacatggcgaccgccgtcgtacccgggatttgccacgcggtggcgttgatgtggcttcttctcgtgttgttttgctgggcgccggggttgacgtcggcggccgatacggcggcgtacattgtgcacatggacaagtcggccatgccgagggcgttcgccagccaggcgagctggtacgagtccaccctcgccgcggcggcgcccggggccgacatgttctacgtgtacgacaacgccatgcacggcttcgcggcgcgggtgaccgcggacgagctggagaagctgagggggtccaggggcttcgtgtcgtgctaccccgacgacgcgagggcggtgaggcgtgacacgacgcacacgccggagttcctcggcgtcagcgcgtcgtcgggcgggctgtgggaggcgtcggagtacggcgaggacgtcatcgtcggcgtggtggacacgggcgtgtggcccgagagcgcgagcttccgcgacgacgggctcccgccggtgccggcacggtggaagggctactgcgagtccggcacggcgttcgacgccgggaaggtgtgcaaccggaagctcgtcggcgcgcgcaagttcaacaaggggctcgtcgcggcgaccaacctgaccatcgccgtcaactccccgcgcgacaccgacgggcacggcacgcacacgtcgtccacggccgcgggctcgcccgtggcgggcgcgtcgttcttcggctacgcgcccggcaccgcgcgcggcatggcgccccgcgccagggtggccatgtacaaggccctgtgggacgaaggcacgtacccgtccgacatactcgccgccatagaccaggccatcgccgacggcgtcgacgtcctctccctctcccttggcctgaacgacgtcccgttctaccgagaccccatcgccatcggcgccttcgcggcgatgcagcgcggcgtgttcgtgtcaacctcggccggtaacgacggccccgaccccggcttcctccacaacggcacgccgtggacgctcaccgtcgcgtcgggcacgggcgaccgggagttcgccggcatcgtcaggctcggcgacggcacgaccgtcattggccagtcaatgtacccaggcagcccgagcaccatcgcgagctccgggttcgtcttcctcggcgcgtgcgacaacgacacggcgctcgcgagaaaccgcgacaaggtcgtgctctgcgacgccacggactccctcagcgccgccattttcgcggtgcaggtcgccaaggcgcgcgccgggctgttcctctccaacgactcgttcagggagctctccgagcacttcaccttccccggcgtgatactgagcccgcaggatgcccccgcgctgctgcagtacatcaagaggagccgcgcgcccagggcgtcgatcaagttcggggtgaccatcctgggcaccaagccggcgccggtggtggcgacgtactcgtcgcgcggcccgtcggcgagctgcccgacggtgctcaaacccgacgtgctcgcgccgggctctctcatcctcgcctcgtggccggagaacgtcagcgtctccaccgttgggagccagcagctgtacagccgcttcaacgtcatctccggcacgtccatgtcgtgcccgcacgcgtccggggtggcggcgctgatcaaggccgtgcacccggagtggagccccgccgcggtgcggtcggcgatgatgacgacggcgagcgcggtggacaacaccaacgcgcccatcaaggacatggggcgggccaaccgcggcgcgacgccgctggcgatgggctcgggacacatcgaccccaaccgcgccgtggacccgggcctcgtctacgacgccggggccgacgactacgtcaagctcatgtgcgccatgaactacacggcggcgcagatcaagaccgtggcgcagtcgccgtcctccgccgtggactgcgccggcgcgaccctggacctcaactacccgtcgttcatcgcgttcttcgaccccggcgccaccgccccggccgcgaggacgttcaccagggcggtgaccaacgtcggcgacgcgccggcgagctacagcgccaaggtgaagggcctgggcgggctgacggtgagcgtctcgccggagaggctggtcttcggccgcaagcacgagacgcagaagtacacggtggtgatccgcgggcagatgaagaacaagaccgacgaggtgctccatgggtcgctgacgtgggtcgacgacgccggcaagtacacggtgaggagcccgattgtggcgacgacggcgagctcggctccgctataggacacctgcacagtgactagattacgctctcattctcataagtcatttccgttcgacttaaaaggaaaacaaaaacaaataaaagcaactaatacttgtgtgtcagcagcagagcatacgataaaacggttttagatgttgtaacttttgaaatgattttttcaaaaggaaaacttgaaatgataatattggaggttagctagattcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0435800, RefSeq:Os05g0435800

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os05g0435800&oldid=14245"