Os05g0446500

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Revision as of 10:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0446500| Description = Conserved hypothetical protein| Version = NM_001062223.1 GI:115464176 GeneID:4338943| Length = 7228 bp| Definition ...")
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Gene Name

Os05g0446500

Description

Conserved hypothetical protein

Version

NM_001062223.1 GI:115464176 GeneID:4338943

Length

7228 bp

Definition

Oryza sativa Japonica Group Os05g0446500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21927637..21934864

Sequence Coding Region

21928031..21928150,21928226..21928677,21928775..21929090,21929419..21930678

Expression

GEO Profiles:Os05g0446500

Genome Context

<gbrowseImage1> name=NC_008398:21927637..21934864 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21927637..21934864 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggacgcgacgacggcgatgacaatcgacttcctccgcgcgcgcctcctctccgagcgctccgtctcccgcgccgccaaggagcgcgccgaccagctcaccaagcgggtggcggagctggaggagcaggtgcgggcggtgacggcgcagcgccggaaggcggagcgtgccgcgggggaggtgctcgccatcctcgagtcccagggcctcgcccgcttctccgatgtggcggattccggttcaggttccgacgatgaggacggcctcgagtccgccgagagcggcagcaaggctcgtggggacgcggaggatgcgctgtcggggtcagagtttggaggcactgctactgcggcggcggccggggggctgtcgtggaagggccgcgccgcgagccacgagtcgcagaggcggcggcagcagcagcagcagcaactgaaaggcaggcatcttaggccgaggcatagccataggagaggctacttttacttggtggccgcggattcgtcgcccaagtaccacccagggcaatcgtgccggaaggtcaagaggaaggagctgaggcttcacactgaaggagacgaggggaaggacaatgccatggaaagtactgaggaggggcacgagagatcagattgtactgtctgtactgatgagcagcctgatattgatggtgaggtgagccaagatgggcagggttcctgtggcaatggaagagatggagatgatgacaatccatatactgttgagtatgagaaggatggggagatggagagagttcttgaaaagcaggcagagttaattgagcaatacgaggaagaagaatatgctcagagggagtgggaaaggaaattcaacaattcccgtgattcaactgcgggtgatgttgagctatgcaataagctaaatcaaattgaaaaggcttgtgagcagagggacaaagctgctcagatcaaggataaagaagtttctgaagtgggagggccaagtgacaaaaatctctttgccaatgacagtccctctgaatgtttgtcaactgattctgtttccggagtgccccaaaatgcaccagaagaaaatgctattaagcattgcaaagttactgagtgtgatcatgattttggggaagctacttcaacagttgtttctgttgatagtggcccacagattaggaaggatgagttggtagacaaaagtttcactgaaattattgaaggaagtgggaataatatagagaagttgtcctcttcactacaaagaaactacgaaagtgtccaaaatgcaagacataatgaagatggagtagatgaaagctcagacggtggtccaggctaccatgtaaatgcttgctcttatgagcactacatcaacacaccatcagttgctagccgatcaagtgacacccctaaaagcaaagtctctgaatggagctcatcatgctttcacaaccacactgataaccagattgacacacagatgcatcaaccttcaagtgatggtgtgggaggtgttttggaggcccttcaacgtgccaagatgtcccttagagaaaagctgagcaaaccaagtccacctagcctggaaatgttagcacttccagcaccagagtatcactacgcaacggatgattcgccagtcagagacacagagctttcactttgcatgtcaacgtttcctagccaggaaatattggcgctaccagaaccagcagagtatcgcagcaggatcataccacgggatgacgtgaaagtgccggtgggccttgctggtttgttccggttgccaacagactcttttgctcaaaatgagttgtgttcagctgatggctatcattcaaggttcagtttgacagcaacaagtcgggaaaacctctcaaatcatttcagggcaaatctgtcactttcacgatatggctccgagttctcaccggatccttgtttcagtgctcgtaattctatgttgctgtcgacaccaacttttggtggatgtagcaacccagtgtcagatttcagagtaggcgacgcttatttcccctctgaagttccaaggtctagcaatagaagagggatgccttctggagatcaagggatgctgttccattttgctggcgattactgctcgaataagtggacgttatag</cdnaseq>

Protein Sequence

<aaseq>MAAAADATTAMTIDFLRARLLSERSVSRAAKERADQLTKRVAEL EEQVRAVTAQRRKAERAAGEVLAILESQGLARFSDVADSGSGSDDEDGLESAESGSKA RGDAEDALSGSEFGGTATAAAAGGLSWKGRAASHESQRRRQQQQQQLKGRHLRPRHSH RRGYFYLVAADSSPKYHPGQSCRKVKRKELRLHTEGDEGKDNAMESTEEGHERSDCTV CTDEQPDIDGEVSQDGQGSCGNGRDGDDDNPYTVEYEKDGEMERVLEKQAELIEQYEE EEYAQREWERKFNNSRDSTAGDVELCNKLNQIEKACEQRDKAAQIKDKEVSEVGGPSD KNLFANDSPSECLSTDSVSGVPQNAPEENAIKHCKVTECDHDFGEATSTVVSVDSGPQ IRKDELVDKSFTEIIEGSGNNIEKLSSSLQRNYESVQNARHNEDGVDESSDGGPGYHV NACSYEHYINTPSVASRSSDTPKSKVSEWSSSCFHNHTDNQIDTQMHQPSSDGVGGVL EALQRAKMSLREKLSKPSPPSLEMLALPAPEYHYATDDSPVRDTELSLCMSTFPSQEI LALPEPAEYRSRIIPRDDVKVPVGLAGLFRLPTDSFAQNELCSADGYHSRFSLTATSR ENLSNHFRANLSLSRYGSEFSPDPCFSARNSMLLSTPTFGGCSNPVSDFRVGDAYFPS EVPRSSNRRGMPSGDQGMLFHFAGDYCSNKWTL</aaseq>

Gene Sequence

<dnaseqindica>395..514#590..1041#1139..1454#1783..3042#atcgttcctttttctctccccggtggaggaagcgaggtgtgcgccggcaccgagcggagcggtagccgcgcggcgccggcgacgagcggggctccacccatcctcctcctccgaccggcggctagcgggagcccgacagggcggatctggcgtgacgcggccctccccccccccccttccccgggggggcgccggcgtggcctcccgggacctccgccgctcctctcccctcctccggccgccatgcctctcctcctcgtcctccgaccgccgcggtgaggtcggggtggcgcggtccggcgtcgagcggtgtaggggcttcccggcgccggcggggcggcacgagcggcaccctgagctgcgacgagaaggcagcggagaggaggggttcgagatggcggcggcggcggacgcgacgacggcgatgacaatcgacttcctccgcgcgcgcctcctctccgagcgctccgtctcccgcgccgccaaggagcgcgccgaccagctcaccaagcgggtgcgtgagctgcagtcactctccctatcgaccgcattttctctccggctcacggtgtcgctgctgctgctgcaggtggcggagctggaggagcaggtgcgggcggtgacggcgcagcgccggaaggcggagcgtgccgcgggggaggtgctcgccatcctcgagtcccagggcctcgcccgcttctccgatgtggcggattccggttcaggttccgacgatgaggacggcctcgagtccgccgagagcggcagcaaggctcgtggggacgcggaggatgcgctgtcggggtcagagtttggaggcactgctactgcggcggcggccggggggctgtcgtggaagggccgcgccgcgagccacgagtcgcagaggcggcggcagcagcagcagcagcaactgaaaggcaggcatcttaggccgaggcatagccataggagaggctacttttacttggtggccgcggattcgtcgcccaagtaccacccagggcaatcgtgccggaaggtcaagaggaaggagctgaggtccatacaccgggaaattacccaaatttgcgataattgttcatccctgtctgcgcattgctaagctgacataaatgtagctgtactgcattttcaggcttcacactgaaggagacgaggggaaggacaatgccatggaaagtactgaggaggggcacgagagatcagattgtactgtctgtactgatgagcagcctgatattgatggtgaggtgagccaagatgggcagggttcctgtggcaatggaagagatggagatgatgacaatccatatactgttgagtatgagaaggatggggagatggagagagttcttgaaaagcaggcagagttaattgagcaatacgaggaagaagaatatgctcagagggagtgggaaaggaaattcaacaattcccgtgattcaactgcggtatgcgctgtccttcttaatcacaaaatgctgtttcatataggcataagatctgtttaacaaaatagcatgtatttggtggttcagtggttattttagcttcttagatggatgccaatatgccgataaccatataatttcttttgttagagatacttgctgtcaatgtttttatctgatggtatacttgctgtcaatatagtaaaccaagcaattttccttaactttgtttttctcaaagctgttgaacttgcagttgacttgataaaaattaaaatatctaaaattattgttattttcacttgtgcatttgtgttctgatttccagggtgatgttgagctatgcaataagctaaatcaaattgaaaaggcttgtgagcagagggacaaagctgctcagatcaaggataaagaagtttctgaagtgggagggccaagtgacaaaaatctctttgccaatgacagtccctctgaatgtttgtcaactgattctgtttccggagtgccccaaaatgcaccagaagaaaatgctattaagcattgcaaagttactgagtgtgatcatgattttggggaagctacttcaacagttgtttctgttgatagtggcccacagattaggaaggatgagttggtagacaaaagtttcactgaaattattgaaggaagtgggaataatatagagaagttgtcctcttcactacaaagaaactacgaaagtgtccaaaatgcaagacataatgaagatggagtagatgaaagctcagacggtggtccaggctaccatgtaaatgcttgctcttatgagcactacatcaacacaccatcagttgctagccgatcaagtgacacccctaaaagcaaagtctctgaatggagctcatcatgctttcacaaccacactgataaccagattgacacacagatgcatcaaccttcaagtgatggtgtgggaggtgttttggaggcccttcaacgtgccaagatgtcccttagagaaaagctgagcaaaccaagtccacctagcctggaaatgttagcacttccagcaccagagtatcactacgcaacggatgattcgccagtcagagacacagagctttcactttgcatgtcaacgtttcctagccaggaaatattggcgctaccagaaccagcagagtatcgcagcaggatcataccacgggatgacgtgaaagtgccggtgggccttgctggtttgttccggttgccaacagactcttttgctcaaaatgagttgtgttcagctgatggctatcattcaaggttcagtttgacagcaacaagtcgggaaaacctctcaaatcatttcagggcaaatctgtcactttcacgatatggctccgagttctcaccggatccttgtttcagtgctcgtaattctatgttgctgtcgacaccaacttttggtggatgtagcaacccagtgtcagatttcagagtaggcgacgcttatttcccctctgaagttccaaggtctagcaatagaagagggatgccttctggagatcaagggatgctgttccattttgctggcgattactgctcgaataagtggacgttatagctatgcattcttagaaatcatagtatagtctgagtaggatgctttttgtagtatcaattctgcctacggattgacagtgatgtatcacatctagtattccaatctgtgaataattggtgcttataagcagcagttttgtctgatattctctctgatatgccctcgtgacaaggtactctgatatcagtgaagttcaacatgacatctcttgtcactctgatatcagtgaagttcaacatgacatcattttcctcgcaaatgaagctttttcagtggatgggtacatgcatcgaacagggggaaaacggatagatcttgagtctctggtttcctcattcctctctgtctggcaacaccaaataccaatccatcatggcaggtattttttttctgtcccttgcattcatgtgcatatatagggtttttttgtcctttagatcatgtagttttaaaggcaaagggatccgtttcatgatacagcacccgcttgcttgcttcctgagcaatcttaatttgctcgtgtagcaactcatgacagtgttgagacattttgtttcacaaccgtacacgttgttggtcattatcattgcaacaccgcgctaatgttgatcattgtcatcatggttttggccgactggaaaacggcaagtttgttacagctatcatacgcttatgttcccttttgtaaaaatggaaacctctcagaagaactgatggctgaccagataaattaatcaccatcctagtaagcagtactcgaaatgccagtggataaaccccctgactaattgagatgccaaaatgaccaatgccattcgtatatcccagacatagaatcttgtaaaccagcatgaaaaacaattaaacaacattatgccattgatctcaaatcactccctagacccacttattgctgaaaatcctgttgatatgacggtctgtaatatgtacacagggaagcagcaaataatgaaaatcaaagtcatatcatcaatatgaaggtactacctgctataagttctgaaaaactaacatgtcatgagaacagatggtatacacaacaagaagataccgttacattgacaaggtctcttggcaagctagttgaatggataaagcaaatgaaaagtgaataagatacaccaaagccacagaaaaaaaaaacggaatgatattctacgcccatgttaactgatagatgatgatccgcatccgacctgccccagaggtgcatatgaaatattggtgctttctcgtgcccaattggctcccacatcttaaaattaactgtttccaactccactgtttatttcctagaagaatggctatcgtcctgcaggaactaatatgacccatgcacagatcgagagctgatgtaatcaccatcaacattattttatataatttgatatgtccttgttgaaatcagtgtgtttgctcagttgctgctgttttagaggatcttcgcagtttgctcgctgcaaggtggaaatgagggcatagaggccttggtgccctagtttccatgtcgaatcctctcacacagacaaatcctgcattgcattttagtacatgttaatgaaccaccatataaagtaagaggatatgccctaacttatatatctacatcctgaaatgacgaccttttccacctaactaaaccaatttggaagcagccaaagcactcgtgtagaaaaaaatgcaacctttcttttggagctatatgtatgctaacccttattattaactcagaaaaaaggggtttagttatggtagcagtatctttgcctctttggcaccatataacttattaatatattatcagtcagtaatattggatgctggtgactaataactggagtcacctttatttatttgttgaaggaagacacctttatctgtagcactaggaattaaaaatggactcagatatagactctaactgaaccaaatattcaggctccttttagacccttaatactaagtttttgtggaaagtgtgtggacaccttgacgcaatcacacgaattctgtataactgtagaaacatattgtgattatatgatggcatctgtattctgcaaattgtttgattatatgaggaaacaagatacgtcccagaggaaaatgcgctgaaacagtaagtgaaaaaaagtactgttaatacctctccagaagcagtgctgtatttcttctgttgttagacctaaagaataaaaataacagttgtcggtaatgttacagataagatttctgagtcattgtatgggtgaatggtggtaacctttgaatatggttggcactgaagtcccaaagtaaaccatacgcctatgcaagttccataactgctcccttgggatatttatgggattgtggctagaactgtgatcagcaaaaacctgcaaaaacaaatccagaaatcgtaaagtccaactctataaaggcccatggatagcaactctccactatcctactcatactttgacagatataactcagcatacctcattaacttgaaagtaagtgccattaagtggaaaactacctctcatggctgttcggcaaggaacctgttcatgttccagtaaccgtcattagtcaagcaatacttgcaacttcacaaaccaacaatgcatgattacataggaaacagtccgttttgcaatactgaacttttctgttactccagaaacaaccccaaagcagaaaactggacacaattcaacccagaacctgaagtatcaaaaccatgcgcttttcaaccttgtcccaaattttgagtggctttggatgacatcgctaggttaaataaaatgagggagaaatgagggagagttaaatcaccacttatagcctagataaaatgagggagagttaaataaatttaaacggatagtataaaaattttttgtctagtttcacacactaaattttgtgggacaataatacttcacttcaatcttaccgatttatctgggttataaatacttcacagcgaagtaagattattccagaaaattttaagtcgtctactaatataaaggagatgaaaaaaaactttaatcttggaccacatcgccaggttaagaaacatcgtccaaaggctaattcggactgacgttgagaagtgatcggttttgattgttggttaaatagtgtacagtttaaaggttcagatgttctcttttagactttcacaaaagttcatattaagatgtggtgtatagccaaaaacccaaaatctatgctattattattctttaaagtgggctatttcatgcaagaaaagagattacacagacaacagaacaggtttgcttggcactttataagcactagttttcattaaaagttatctttaacattttcttgaattcctgaattcattccaatatttgaattataatgaatattttgtttactagctgactaatgcagagggttcagctcttcaatgttgatgattgctacataatgttggttgatttaccagaaccgtgcctctgacgtatctatattggttttctcgttcagatacacagttgtggcacatctcattgctgcataagccaccttcagtttgaggattgcagcacggttttggtgcctcccttgtgtcctttagttcatctgcacagtagccacatgactcgacgaaaaccagcacacacacacggacagttataaatttaaagaaaaatgcacttgcctggtgtccatatggccaacaggtaaggacttggatcatcaggctcccgttggtcgagtgctagctgtaagatcatttgcaatcagaaataatatcttgaagtgttttaaagaaagatggcacaatttctcatggtctcacctgttgcatgaggggatgtgaatctggaagttcataactgcgagcagaaccttaagtcagtaatagaaattaaaaaatattttgttcaggatgtatagaattacttagatggtgggctctataataaatgtaagtttaaacaggtatatgttcaagctaaataaaatatcagttcaacacttacacatagtgttctgtccgaagtctatgcacattctttagtttaggtacaggaattgaagctgcttcattgctgatagcaaccaatgcttttgtaatatcatcagattggaaatccttattgctttcttttatgcaattttccaagttttgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0446500, RefSeq:Os05g0446500