Os05g0452900

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Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0452900| Description = Conserved hypothetical protein| Version = NM_001062247.1 GI:115464224 GeneID:4338968| Length = 4948 bp| Definition ...")
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Gene Name

Os05g0452900

Description

Conserved hypothetical protein

Version

NM_001062247.1 GI:115464224 GeneID:4338968

Length

4948 bp

Definition

Oryza sativa Japonica Group Os05g0452900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22260475..22265422

Sequence Coding Region

22260754..22260846,22261834..22261979,22262070..22262116,22262196..22262291,22262412..22262514
,22262589..22262649,22262772..22262843,22262922..22263002,22263271..22263339
,22263415..22263501,22264818..22264907,22265019..22265051

Expression

GEO Profiles:Os05g0452900

Genome Context

<gbrowseImage1> name=NC_008398:22260475..22265422 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22260475..22265422 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgatttacatagcgcgggaggcttccaaggtatggaggaaggtgaccacggagacgtcggtggagctctcgctgctgcgcgagaagtggggattgctcctcgccggaattgtgtttcagtatattcatgggctggctgctcgaggagtgcattacttgcatcgacctggtccacttctgcaggaccttggatttatggcccttccagagtttgggcaagacaaaggttatctaagtgagagcatatttgcttccatcttcgcttcctttgttttatggacttttcatccttttatttatcatagcaaaagattctacactgtcctaatctggcgccgggtgctagcctttttagttgcttcgcaggttttaagaatcattacgttctattccacccagcttccgggcccaaactaccattgtcgtgagggctcaaagttggctactcttccaccacccaacaatgtatttgaagtgctcctgattaactttcctcgtggagtactttttggctgcggtgatctgatattttcatctcacatgatttttactcttgtttttgttcgaacataccacaaatatggttcaaaaaggtttgttaagcttcttgcttggttcatggccatagttcagagtcttcttataattgcttctcgcaaacactactctgtggatgttgttgttgcttggtataccgttaatttagtcgtattcttcgtggacaacaaactcccagaaatgccggatcgtacaaatggagtacctttgcttccattgagtaccagggaaaaggatggcaggttgaaggaggagaaagacagcagactgaaggaagagttccataagctattaaacggaaaccatggggatcctactgatcggcgacagcgcgcgcagatgaacgggaggcacgatgaagacatcaatcacgcccacagcacgctctccgacgctgctgtcaatggtggtacatga</cdnaseq>

Protein Sequence

<aaseq>MTIYIAREASKVWRKVTTETSVELSLLREKWGLLLAGIVFQYIH GLAARGVHYLHRPGPLLQDLGFMALPEFGQDKGYLSESIFASIFASFVLWTFHPFIYH SKRFYTVLIWRRVLAFLVASQVLRIITFYSTQLPGPNYHCREGSKLATLPPPNNVFEV LLINFPRGVLFGCGDLIFSSHMIFTLVFVRTYHKYGSKRFVKLLAWFMAIVQSLLIIA SRKHYSVDVVVAWYTVNLVVFFVDNKLPEMPDRTNGVPLLPLSTREKDGRLKEEKDSR LKEEFHKLLNGNHGDPTDRRQRAQMNGRHDEDINHAHSTLSDAAVNGGT</aaseq>

Gene Sequence

<dnaseqindica>4577..4669#3444..3589#3307..3353#3132..3227#2909..3011#2774..2834#2580..2651#2421..2501#2084..2152#1922..2008#516..605#372..404#ctcgatctctccacaactccccccccccctccagctctctccaaagtccaagtctctctcggtgctcacgccgccgccggccaccgccgccccccgtccgtacaccgcgtggcccgcccccgcgcaggtgagggagctagcggccttcgtctgccggcgccggaggcggagccagattgttgggaaacgagttttccgcccgcttctctggtttctcggcggtgtcttttactcctggggcggcgatcccgacgcggggatgcggcgggctgtggcgtgatgtgtggatcggagcatggacttgatcgcgtcgcacggtaggagctgcagcggtcggggtgggagcaggggtcgcgcggcggggtgcggccatgacgatttacatagcgcgggaggcttccaaggttttctctctgttttttttttcgatcttgtgctttttttagtgtggatttctttgtcgatcgcgtcgtgtgaatttgcgatttttatttttttcacctcttgttgtgtaggtatggaggaaggtgaccacggagacgtcggtggagctctcgctgctgcgcgagaagtggggattgctcctcgccggaattgtgtttcaggtgagctcgtcagtttgttactagtagtactagttttcggtcgtgtgcgtggaattactgatttcgcgcgtgatgtggttattgctagtggtggagtgcgttacagaattttaatgccgagttgatgagaggttgccaaatttgcccccccctgttgcaacgcgatttgcactttgttatcgttgataatgttgccgttttggggttttttagtagccatgtgattagcctttggggtttttttggttgctaggcgagaccttaaatagctatactaaatctgtagtcagtaacatttacaagtgttctgtgttgtatattggagtgcattctttgtagtctgtgtagattagggattcagtgctgctctttcaaggaatgaatgaatgatgccctgggcacagattgccttttcggttttgaaattgcaatggaatgtcataataaggaacagtcctgctgtatgcatggcatgaaaaattcattggccgtgagcagtataagaaaattgagcgggtaaacactttgttcaaatgtttgtctagctagtgccgcgctcttacatggtatatgccattgtagaggtgaattgtcgccatctgtgtcaattgatactcttgtattcatctgtcttctgttttcctttctgagacatgttaaatctatcctcattgccttgttttaaaaattaatataggtttatgtttcttttaacagtatatcgcctgaactatcatgtcatgcatggaaataatagttactatgcatgttgtgaattttcctagatgtattcttgtaactactattactttctcataaatccacaataaaagttcatgagaactatttttaaatgctactcaatccaacttattttgtctgtgatacagtcttgctgatagtagacagtgtcttctgagttctgacccaccactcactgatccaatctctgattcctatattattttgacatttgggatataagtgtgctgtctctctgaacactaaacagaatatttctgtgtgtgcactcaagtcatgtgacttgcacattcacagcataacggttgaaaatcttggtcaataagttcatgcagttttagatcgcaattcctaactttcattggaagaccatagttctgacagatcaatattgtttgttgtttccttttctttttggcgtgatggaaattttctgtgttcagttctcttttttttttctgcatttagttatataggattacttattcttctgtgtttgtcagttgattaatggattactttggagattcatacaatattttgcctataattagtatattcatgggctggctgctcgaggagtgcattacttgcatcgacctggtccacttctgcaggaccttggatttatggcccttccagtaagtaaatcacttatcctttttgctatcgattaatttgcatatgtaacagccaattattaccgttgtttttaggagtttgggcaagacaaaggttatctaagtgagagcatatttgcttccatcttcgcttcctttgttttagtatgtatccttgtactctacttatttctgtttgtttaattgataactgataatttgtataaccaagaaaaactagatcattcagatatcaacacctaagcataaataaaaaaataataggcgtgatctatcatcattctctgttgagagatgggtcatattcctggtcatgacatattgaagattatagttcctttcatgcatttatgtgattcctttttatactgcaacttatcaagctgggtctcacaagtatatttatgtgcagtggacttttcatccttttatttatcatagcaaaagattctacactgtcctaatctggcgccgggtgctagcctttttagttgtgagtgcattcttcctatttttccattgatatagtttatgcatgccactgaaaagtaactgaatatttcttcttcaggcttcgcaggttttaagaatcattacgttctattccacccagcttccgggcccaaactaccattgtcgtgaggtgcctttttcattttagccaagaattttacatgcactcttgctctgcttttggacatgtgaaaacttgtaaacctgtcaattactcattttagcactcatccgaagcttttacctttatagggctcaaagttggctactcttccaccacccaacaatgtatttgaagtgctcctgattaactgtaagtttctattgtggtttgacagctgcgcaaggaatttttcctgatcacacaagttcatttttctttttcagttcctcgtggagtactttttggctgcggtgatctgatattttcatctcacatgatttttactcttgtttttgttcgaacataccacaaatatggttcaaaaaggtatgttcttaccaatgttttctggtttgaacattaccaagttctgagacccctgaatattaactttgcctgagtgtattcctgaacactaaaatttaactggtggaccttttgttacaggtttgttaagcttcttgcttggttcatggccatagttcagagtcttcttataattgcttctcgcaaacactactctgtggatgttgttgttgcttggtatgataagtttagctccttgcttgttattgtcataatgtggccactacctctcttttcacatacttttcccatgcaggtataccgttaatttagtcgtattcttcgtggacaacaaactcccaggttatatttttgtcacatttgttgccttacgcctttacagggatttgtatggcaaacactttgtaacaagctttgttgagatatttacagaaatgccggatcgtacaaatggagtacctttgcttccattgagtaccagggaaaaggatggcaggttgaaggaggagaaagacagcagactgaaggaagagttccataagctattaaacggaaaccatggggatcctactgatcgggtattgtagaagtcttctccctatatactccctgaacaagcctagcttagtacagtcagcctgtctattagatgaacttgcctatactttatactatgctggatcctactttctccgtcccaaaataaacaaacatattatgagatgcgataacctgctcagatcattatactagaatacgtcacatctcatgatttgtttattgagacggagcgagtactactaaatttgtttacaacccttgctagtttaattactccctccatcctaataatatactacctccgtcccaaaatgtagctatttctagcacagtactttatcccaaaatgaagctatttttctacctaccttctcctctcaaccaatcacaaccattttttttcacctactttctcttttcaaccaattacacaccttattcaatcattctcacctactttcttaatacccgtgccaacctaaaaaatgcttacattttgggacggaggaagtacttcctagaatatacttagataatctggatttgacgtaacctagtagcagcttactcccttcgtcccaaaaaaggcaaatcttgggtttccgtgtccaactttgattgtccgtcttatatgaaatttttttataattcgtattttcattgttgttagatgataaaatatgattaatattttatgcgtgacttgtctttttaatttttttcataattttttcaaataagacggacggtcaaacgttggacacggaaaccagggtttgtcttttttttgggtcggagggagtagtttagtatcggattgtattctagtactatgagaatctggatatatacgttcaatctggttttaggttagtattatattttgggagagggattacaacaaaaacctcgatcttgattggaggagccatctactaggcatactggaacaaactgtcacattgcactttttttttctgacgtgtctgtttctatcaattcagcgacagcgcgcgcagatgaacgggaggcacgatgaagacatcaatcacgcccacagcacgctctccgacgctgctgtcaatggtggtacatgagccgcggcatctgctttccaccgggagtttgtcttctcgcgtcgaccccgaggagaatcctctgggggcggattgagaacaaccgcccggtccatctgcatagtgcatgcacatcctgaacaagattccagcggcagaggcagcattacacatggtttccttgtcgatttctgctcatccaccatcctggtactatagcatgatcgcagataaaacgaatgaaatgaatggatgatttggtgctctaatcaatcgggcggtagacgctattcaggaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0452900, RefSeq:Os05g0452900