Os05g0468100

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0468100| Description = Protein of unknown function DUF1618 domain containing protein| Version = NM_001062331.1 GI:115464392 GeneID:4339059| ...")
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Gene Name

Os05g0468100

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001062331.1 GI:115464392 GeneID:4339059

Length

3540 bp

Definition

Oryza sativa Japonica Group Os05g0468100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23020307..23023846

Sequence Coding Region

23020357..23021614,23022627..23022706

Expression

GEO Profiles:Os05g0468100

Genome Context

<gbrowseImage1> name=NC_008398:23020307..23023846 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23020307..23023846 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgcagctccggcacctccttggtctctccggcgaggtctctggccgcctccgccgctcccactcgacggccgcctcgcgacccgcgtgggccatgatggccgacatggggttggtccacacggagcaagaaccgccggagccaatcacgaccgcgaccttctgcctcgcctcgccaccgcgcgtctcccagctcgtcgtccccatccgcttcatcgtgtccctcgctgtccccgtcgacgacggcagcaagggggaggtcatctcccgcggcaccatctgcgcggcgaacagcggcggcctcttcctcgtccgcaccgcgctcgagctagtccaagttcctgcccatggcggaaaccccgtcttcatccccaggcccaaggatgacacctggccgccgctccctggcctcaagtccgacaccaaagtcgtccgcgtcgtctgcaaccctctcaccggcggcgagctgctccccctcccggaggaggaccctgacaccggcgacacgggcggtacttggcgctttgtcaagcccggcttcctcacccaagccgaccgcggcgacgggccgcctgatcgatacgcggtggcggagatcagaggcgaggattccatcatgcaccgattcctctcggagacggggaggtgggacgcgacgccgggcttctcgtccgcgatccccgcggcgcgtccagcgatcaccgcggaccatccggtggtgagcttcggaggccggatgtggtggatcgacctggcctggggcgccgtctccgtcgacccgttcgcggccgagccggacttccgcttcgtcgagctgccgagcggcagcgtgctgcccgccgccgacgcgataagcttcgagaggcggcggctgcaggaggcgccgctgagcaggtaccggcgcgtcggggtcagcgaggggaggctgcgctacgtcgaggtgtccgaggcgtcgccgttcgtgctcagctgcttcacgctcgacgacgaaggcggcagcggctggactctggagcacagagtggcgctcggccggctctggtcggagccattgcaggagacaccgcggatcggtgctctcgatccgctgaaagctagtgtggtgtacctcatgatcggcgaggatggtaggcacgttgtcggggtggacttggagaagggggtgatgatcgggagctgtctgctggagcatcccatcgggctgacaccctgcgtgctcccgccatggcttgaaacaagccggatcccttctacaggaaccctttcgagcaagaagaccaatgctgaaagtaagagtttgggagacatgctggttcgtgtagatagaggctgttaa</cdnaseq>

Protein Sequence

<aaseq>MMQLRHLLGLSGEVSGRLRRSHSTAASRPAWAMMADMGLVHTEQ EPPEPITTATFCLASPPRVSQLVVPIRFIVSLAVPVDDGSKGEVISRGTICAANSGGL FLVRTALELVQVPAHGGNPVFIPRPKDDTWPPLPGLKSDTKVVRVVCNPLTGGELLPL PEEDPDTGDTGGTWRFVKPGFLTQADRGDGPPDRYAVAEIRGEDSIMHRFLSETGRWD ATPGFSSAIPAARPAITADHPVVSFGGRMWWIDLAWGAVSVDPFAAEPDFRFVELPSG SVLPAADAISFERRRLQEAPLSRYRRVGVSEGRLRYVEVSEASPFVLSCFTLDDEGGS GWTLEHRVALGRLWSEPLQETPRIGALDPLKASVVYLMIGEDGRHVVGVDLEKGVMIG SCLLEHPIGLTPCVLPPWLETSRIPSTGTLSSKKTNAESKSLGDMLVRVDRGC</aaseq>

Gene Sequence

<dnaseqindica>51..1308#2321..2400#tttttccccatcaccacagcaccactagacgacaagacgccgtggcggccatgatgcagctccggcacctccttggtctctccggcgaggtctctggccgcctccgccgctcccactcgacggccgcctcgcgacccgcgtgggccatgatggccgacatggggttggtccacacggagcaagaaccgccggagccaatcacgaccgcgaccttctgcctcgcctcgccaccgcgcgtctcccagctcgtcgtccccatccgcttcatcgtgtccctcgctgtccccgtcgacgacggcagcaagggggaggtcatctcccgcggcaccatctgcgcggcgaacagcggcggcctcttcctcgtccgcaccgcgctcgagctagtccaagttcctgcccatggcggaaaccccgtcttcatccccaggcccaaggatgacacctggccgccgctccctggcctcaagtccgacaccaaagtcgtccgcgtcgtctgcaaccctctcaccggcggcgagctgctccccctcccggaggaggaccctgacaccggcgacacgggcggtacttggcgctttgtcaagcccggcttcctcacccaagccgaccgcggcgacgggccgcctgatcgatacgcggtggcggagatcagaggcgaggattccatcatgcaccgattcctctcggagacggggaggtgggacgcgacgccgggcttctcgtccgcgatccccgcggcgcgtccagcgatcaccgcggaccatccggtggtgagcttcggaggccggatgtggtggatcgacctggcctggggcgccgtctccgtcgacccgttcgcggccgagccggacttccgcttcgtcgagctgccgagcggcagcgtgctgcccgccgccgacgcgataagcttcgagaggcggcggctgcaggaggcgccgctgagcaggtaccggcgcgtcggggtcagcgaggggaggctgcgctacgtcgaggtgtccgaggcgtcgccgttcgtgctcagctgcttcacgctcgacgacgaaggcggcagcggctggactctggagcacagagtggcgctcggccggctctggtcggagccattgcaggagacaccgcggatcggtgctctcgatccgctgaaagctagtgtggtgtacctcatgatcggcgaggatggtaggcacgttgtcggggtggacttggagaagggggtgatgatcgggagctgtctgctggagcatcccatcgggctgacaccctgcgtgctcccgccatggcttgaaacaagccggatcccttctacaggtgtttgatctactaagcatttttccttctctctgtatgtgtgtgtgtgtttttttttcagtggctcttgttactatgttagtgcatccatgtttatcactgcctgatttttgctaaaaatgggcgtcgtaactatttttgctgtttgctgctaactcgcgtgaatgttcgagtaatgcatttgggctttggcaggggttggttagttcttctaagcctcctgttgtaagttgctacaggttatagctcattttcatccataggcttaaatgttattataggtatattttgtgaattcagatttacaatgttctacatttgcttccatcgttttgtaattcggagttgcaatgcaataaaaatgatgtttgatgtctaatatttgctttgcagttttctaacttaattcggattatgtttctgaactccatattctgcatcaagttttccttaatttctatgtctctactagtctaatgcagtactattgaaatgttactttgaaatggtgccgcgtagctgccctcaaagtggtgccactgctatgttaagctgagtaaatcctccctgataggacttacacttctagtaaattgactatagcagtgataatcatcgacaaatatcagcaccagaacttagtatttcccagaagaatctcacatgttgctgtcattggagaggaatgcctgttatgtagcacttcctccgtttcaggttataagactttctagcattgtccacattcatatagatgttaatgaaactaggcacacgtatatgtcttgattcattaacatatatatgaatatgggcaatgctagaaagtcttataacctgaaaacttaggtagtaacagttattatttgttcatgtagttaatgcccaagtgttttgatgcaatgttcattgccacgtttttttcaattattggatacatacattgttcttgtcactatcatggctatgctattattgtctcttgattaaattcttgtatacatgattgcaggaaccctttcgagcaagaagaccaatgctgaaagtaagagtttgggagacatgctggttcgtgtagatagaggctgttaaaaatgaagcgtacttgctaattcatcttttggtatttttctcttcctaactcatgtgcttgtgtacccttgttatatccactacttgtcatatttcatcagtccttccggatctctcatatattagttgcagtcattcaataggttacttttaagaaacaactcgctcatagtctgttcagtccaattctaccatgtggataagtctctcgtggttgactaatacttggatgctattgatgttactaatcttgtattttttgtttgaattctttggtgtttatgaatgatactagttacatctgtctgcctccttatgatggtgttaccatttctaaagcttatactcgaattgtcacggagtacttgttctgctcatacatctttattgccgaatgttgctgctgctgagaattgctgcttcggtaaaggacaatcactcctatcagaacaagcagacatgaactatctcaaacctaaaagtttctcagaatcttcatgttgatgtgtcttttactatgctgaaatatttgtaactagtcgatcaagattcaagagtagactgaactactaaagtatgttgcatcttgcatgctactttactagttactagtactatattatcaggctgtaatttgtgctgtagcctgtagtcaagacttaagtcatgcaatgcttcacgcttgactgatagcttaggtacaaaaccaaatggatgttctggtttcagtgttacttttggttaaccaccaaaactggcgattgttcatttcacttgttctgtgctattctctgtttgtgagatagggagactgatgtttactcattgattgcaggttccttgaaatttactggtagagatccagagattccctttgatggtagcagtttcttcaagtacctgaactctcattttggggatgctgggagaagtttgggttttgctgtgcatctggactttgctggtgctacctgttgaattttgagggttttgatgcgagaaatttgagtttgttgggctttactgatggaactttgtgtccctcatttgacaaattatggcaaacgttttgcaacttctccttgctgtatgtgctatgaaccatgtttactttattcagtgatagacttggttcgattg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0468100, RefSeq:Os05g0468100