Os05g0468200

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0468200| Description = Conserved hypothetical protein| Version = NM_001062332.1 GI:115464394 GeneID:4339060| Length = 3551 bp| Definition ...")
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Gene Name

Os05g0468200

Description

Conserved hypothetical protein

Version

NM_001062332.1 GI:115464394 GeneID:4339060

Length

3551 bp

Definition

Oryza sativa Japonica Group Os05g0468200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23024414..23027964

Sequence Coding Region

23024463..23025642,23026482..23026561

Expression

GEO Profiles:Os05g0468200

Genome Context

<gbrowseImage1> name=NC_008398:23024414..23027964 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23024414..23027964 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagctccggcgactccttgctctctccggtgaggtctccggccgcctccgccgccgctcccactcgacgttcgcctctccctcgcgtcctgcgtgggccatggtggtcagcgagccgcaagaggaggcgccggagctacgcgcgaccttccgcctcgcagagcccccgcgtgcctcccaactcctcgtcccctacgacgccatccgtccccgcggtagccagggccccctttgtgccgccgccgaggaagcgaccagcgaggacggcctgctcctcctccgcgccattgttgcgcatggcgcctgcgcctgcgcccacgcgacggctcccaacctccccgcttcgtctcggcctccgggccagaggagcgtcgctcgcgtcgtctgcaaccctctcaccggccagctgctccgcctcccggacatcgacggtgcaagcagcgaggtttcgcccggtctgatgggctacgccggcttgctcacccaagccgacggcggcgacgggccgcccgacaggtacgcggtggccgaggtcagctgcgacgacttcgtcatgcaccgattcctctcggagacggggaggtgggacgcgatgccgggattcctgtccccgctgccggccgcgcgcccgatcgtcgtggaccagccggtggtggctttcggcggccggctgtggtggatcgacctcgcctggggcgccgtctccgtcgacccgttcgccgacgagcccgatttccgattcgtcgagctgccgaggggcagagtgctgccttcatccaacgagatgagcttcgagaggcgacgacggaagaaggtgctgagcacgcaccggcgcgtcggggtcagcgaggggacgctgcgctacgtcgaggtgtccggagtggagcagttcgtggtcaggtcctacgtgctcgacgacgatggcagcagctggacgatggagcagagcacagcgctgcgggcgcaaggggcgcccttcccggggatgccaggcatcgcttgcatcgatccggttaacgccgacgtcgtgtacatcatggtcgggagcgggctcgttttgggagtggatatggagagggggatggggtttgggctttctgtgctggatgagcctgcctggccgacaccctgcgtgctcccgccgtggcttgaatcaacccggatcccttcttctacagaaacccttttgagcaagaagaccaatgttgaaaggaagtctttggcagacatgctggttcgtgtagatagatgctgttaa</cdnaseq>

Protein Sequence

<aaseq>MQLRRLLALSGEVSGRLRRRSHSTFASPSRPAWAMVVSEPQEEA PELRATFRLAEPPRASQLLVPYDAIRPRGSQGPLCAAAEEATSEDGLLLLRAIVAHGA CACAHATAPNLPASSRPPGQRSVARVVCNPLTGQLLRLPDIDGASSEVSPGLMGYAGL LTQADGGDGPPDRYAVAEVSCDDFVMHRFLSETGRWDAMPGFLSPLPAARPIVVDQPV VAFGGRLWWIDLAWGAVSVDPFADEPDFRFVELPRGRVLPSSNEMSFERRRRKKVLST HRRVGVSEGTLRYVEVSGVEQFVVRSYVLDDDGSSWTMEQSTALRAQGAPFPGMPGIA CIDPVNADVVYIMVGSGLVLGVDMERGMGFGLSVLDEPAWPTPCVLPPWLESTRIPSS TETLLSKKTNVERKSLADMLVRVDRCC</aaseq>

Gene Sequence

<dnaseqindica>50..1229#2069..2148#aatcctccgtcctctccctctcctctcccaagtccccaccgccgccacgatgcagctccggcgactccttgctctctccggtgaggtctccggccgcctccgccgccgctcccactcgacgttcgcctctccctcgcgtcctgcgtgggccatggtggtcagcgagccgcaagaggaggcgccggagctacgcgcgaccttccgcctcgcagagcccccgcgtgcctcccaactcctcgtcccctacgacgccatccgtccccgcggtagccagggccccctttgtgccgccgccgaggaagcgaccagcgaggacggcctgctcctcctccgcgccattgttgcgcatggcgcctgcgcctgcgcccacgcgacggctcccaacctccccgcttcgtctcggcctccgggccagaggagcgtcgctcgcgtcgtctgcaaccctctcaccggccagctgctccgcctcccggacatcgacggtgcaagcagcgaggtttcgcccggtctgatgggctacgccggcttgctcacccaagccgacggcggcgacgggccgcccgacaggtacgcggtggccgaggtcagctgcgacgacttcgtcatgcaccgattcctctcggagacggggaggtgggacgcgatgccgggattcctgtccccgctgccggccgcgcgcccgatcgtcgtggaccagccggtggtggctttcggcggccggctgtggtggatcgacctcgcctggggcgccgtctccgtcgacccgttcgccgacgagcccgatttccgattcgtcgagctgccgaggggcagagtgctgccttcatccaacgagatgagcttcgagaggcgacgacggaagaaggtgctgagcacgcaccggcgcgtcggggtcagcgaggggacgctgcgctacgtcgaggtgtccggagtggagcagttcgtggtcaggtcctacgtgctcgacgacgatggcagcagctggacgatggagcagagcacagcgctgcgggcgcaaggggcgcccttcccggggatgccaggcatcgcttgcatcgatccggttaacgccgacgtcgtgtacatcatggtcgggagcgggctcgttttgggagtggatatggagagggggatggggtttgggctttctgtgctggatgagcctgcctggccgacaccctgcgtgctcccgccgtggcttgaatcaacccggatcccttcttctacaggtgtttgatcaactaagcattttttcttctcatgtggttatctgttctgcacttcccatctaactaaaaatgtctgaattttattaaaaatggatgccataacgattttcctgttcgctgctaacgcgcctgaattttcatgtaacacgtttgggcttatacaggtgttggtcagtgtagttcctctaagcatcctattgcaatttgatacagattatatctcattagggtccctggcttaaatcttattactgttatccactgagtttctaatttatagtgttctacaattgcttccatctttatgtaattcggactaatgcaataaaaaggatgtttgatgctaactgtttgcttttcaggttactaaattgactggtgaattctattcagattttgtttgtgaactccaaattttgcatctagtttaccttaatttctatctttctctactagtctaatgcagtactattgaaaatgttccattgaagtgatcctgcatagctgccctcaaagtggtgccaccgctaggttaagcagagtcaatcctctctgatagggcttgcacttctagtaaattgactataccagtgataatcatcgacatatatcagcaccagaacttggtatttcccagaagaatctcgcatattgtggtcttggagaggaatgtctgttgtgtaacacttgttattttgttcatatagttaatgcccaggtgttttgatgcaatgttcattaccatgtcttttgcaattattggatatatacgcatattgtttcttgtcactatcatggctgtgttactactgttcaaattcttgtatacatgattgcagaaacccttttgagcaagaagaccaatgttgaaaggaagtctttggcagacatgctggttcgtgtagatagatgctgttaaaaatgaagcacactggctaattcatctattggtattttctcttctaactcatgtgtttgtgtacccttgttttatccactatttgtcatatttcattgctccttccggatctctcatattagttgcaggctttttttttacgggtattagttgcaggcttgcagctaatgcaataggttacttttgagaaacaacttgctcataatctgttagttattacatcgtcagtccaatgctatcgtgtggatgagtctatcatggttgaccaatacttcgatgctatcgatgttcctaatctttttttttctgaattcgttggagtttatgaatgatactaggtacatttgtctacctccttataatggtgttaccatttctagagcttatactcaaattgttgtggagtacttgatttgctcatacatccttattcccaaatgttagtgctgctgagaatagctgcttaagcttaaatgccacaggttgcctggccagctggcattaccatcaggatgaatcatgttctttttgtcctacaatattgtggccaacttatgaagtcagaaattctgcttgctaacatgtatatatcactatctgctctaatttcttttaatttatccatatagagaatgcatatgttccagggaacaataattgacaattcattttttttatttcatactttctaaaggaacacataaaaaaggccttgtatctgtacaaaaattgttgattttgtttcctttttattctgactaaactctaaaagacgatgtttacttgtgttcacacgataacatgcatacggtgtttattagtggtctctctctattgccatgcaagtaaatttgatgacatggaggaaagagaaaggagtatggttgttatgtatgacaacggctcagagtcgactcttagcatttactagagcaaattttgttgcatggtggtgaaagaaaggaaataaaagtaagaaaaaatattttgatacattaatgattagagaccatattgtctctaactgttgtaggatgctaatctctaaataacgtagagctcatatccgactctacctttgtacatgccctaatgttttccgtttactttccagggttcataatctaaatgcaagtgctatgatcaattaagatgttaatggtggtaattgctgaactctttttttttgtgaaaatctggggaatgaagaagtttggtttgtttgtctttgctgataaaatcagttaagtcttattttggtgaggttgtgggagtttcgccatttcagtgctccgacttgttggtcgttccatcagaatgattcggttcaatcagcatgtaatggctactataaagtacaaacagcttgcatggcatcagttctgttactttgtaagcatatt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0468200, RefSeq:Os05g0468200