Os05g0474800

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0474800| Description = WRKY transcription factor 70| Version = NM_001062363.1 GI:115464456 GeneID:4339092| Length = 2942 bp| Definition = ...")
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Gene Name

Os05g0474800

Description

WRKY transcription factor 70

Version

NM_001062363.1 GI:115464456 GeneID:4339092

Length

2942 bp

Definition

Oryza sativa Japonica Group Os05g0474800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23356318..23359259

Sequence Coding Region

23356732..23357215,23357312..23358084,23358589..23358825,23358929..23359153

Expression

GEO Profiles:Os05g0474800

Genome Context

<gbrowseImage1> name=NC_008398:23356318..23359259 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23356318..23359259 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccgccgcgccggggagcctcccgctggtgaactcgaggcccgtctccctctccttggcggcgagcaggtcgtccttctccagcctgctcagtggcggcgccggctcgtcgttgaacctcatgacgccgccgtcttctctcccgccgtcgtcgccgtcgtcctacttcggcggcgtctcgtcctccgggtttctcgactcgccgatcctcctcacgcccagtttattcccatcgccgacgacgacgggcgcattgttcagctggattacgacggcgacggcgacggcggcgatagcgccggagagccaggtgcaaggaggggtcaaggacgagcagcaacagtactcggacttcacgttcctgccgacggcgtccacggcgccggcgacgacgatggccggagccaccgcgacgacgtccaactccttcatgcaggactccatgctaatggctccattgggaggggacccgtacaatggcgagcagcagcagccatggagctaccaagaaccgaccatggacgctgacactaggccagcggaattcacctcgtcggcggcggcgggtgacgtggccgggaacggcagctacagccaggtggcggcgccggcggcggccggcggcttccgtcagcagagccggcggtcgtcggacgacggctacaactggcgcaagtacgggcagaagcagatgaaggggagcgagaacccgcgcagctactacaagtgcaccttccctggctgcccgaccaagaagaaggtggagcagtcgccggacggccaggtcaccgagatcgtctacaagggcgcgcacagccaccccaagccgccgcagaacggccgcggccgcggcggctccggctacgcgctgcatggcggcgccgccagcgacgcatactcctccgccgacgcgctctccggcacgccggtggcgacgcccgagaactcgtcggcgtcgttcggggacgacgaggcggtcaacggcgtcagctcgtcgctgcgggtcgcctctagcgtcggcggcggcgaggatctcgacgacgacgagcctgattccaagaggtggaggagagacggcggcgacggcgagggcgtctcgctggtggccggcaaccggacggtgcgtgagccgagggtggttgtgcagacgatgagcgacatcgacatcctcgacgacggctaccggtggcgcaagtacgggcagaaggtggtcaagggcaacccaaacccaaggagctactacaagtgcacgacggccgggtgccccgtgcggaagcacgtggagcgcgcgtccaacgacctgcgcgcggtgatcaccacgtacgagggcaagcacaaccacgacgtgcccgcggcgcgcgggagcgccgccgccgcgctctaccgcgccacgccgccgccgcaggcgagcaacgccggcatgatgcccaccacggcgcagccctcgagctacctgcagggcggcggcggcgtccttccggccggcgggtacggcgcgtcgtacggcggcgcgccgacgacgacgcagcccgcgaacggcggtggcttcgccgccctgtccggccggttcgacgacgacgcgacgggagcgtcttactcttacacgagccagcagcagcagcagccgaacgacgcggtgtactacgcgtcgagagccaaggatgagccgagagacgacggcatcatgtcgttctttgagcagccgctgctgttttga</cdnaseq>

Protein Sequence

<aaseq>MTAAPGSLPLVNSRPVSLSLAASRSSFSSLLSGGAGSSLNLMTP PSSLPPSSPSSYFGGVSSSGFLDSPILLTPSLFPSPTTTGALFSWITTATATAAIAPE SQVQGGVKDEQQQYSDFTFLPTASTAPATTMAGATATTSNSFMQDSMLMAPLGGDPYN GEQQQPWSYQEPTMDADTRPAEFTSSAAAGDVAGNGSYSQVAAPAAAGGFRQQSRRSS DDGYNWRKYGQKQMKGSENPRSYYKCTFPGCPTKKKVEQSPDGQVTEIVYKGAHSHPK PPQNGRGRGGSGYALHGGAASDAYSSADALSGTPVATPENSSASFGDDEAVNGVSSSL RVASSVGGGEDLDDDEPDSKRWRRDGGDGEGVSLVAGNRTVREPRVVVQTMSDIDILD DGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHVERASNDLRAVITTYEGKHNHDV PAARGSAAAALYRATPPPQASNAGMMPTTAQPSSYLQGGGGVLPAGGYGASYGGAPTT TQPANGGGFAALSGRFDDDATGASYSYTSQQQQQPNDAVYYASRAKDEPRDDGIMSFF EQPLLF</aaseq>

Gene Sequence

<dnaseqindica>2045..2528#1176..1948#435..671#107..331#aagaagcagtagccacacccacacgcacacccgatcgatcctggcatcctactctgctcgatcgaatcgctagctttcttcttcttcttcttctcctccgtctccgatgaccgccgcgccggggagcctcccgctggtgaactcgaggcccgtctccctctccttggcggcgagcaggtcgtccttctccagcctgctcagtggcggcgccggctcgtcgttgaacctcatgacgccgccgtcttctctcccgccgtcgtcgccgtcgtcctacttcggcggcgtctcgtcctccgggtttctcgactcgccgatcctcctcacgcccagtgtaagcaagcacggccgccgtagccgatcgagcatcccatttcctttgccaaattgcaccggcatgtgtggctgattattgagctccatcgtgtttgtttcagttattcccatcgccgacgacgacgggcgcattgttcagctggattacgacggcgacggcgacggcggcgatagcgccggagagccaggtgcaaggaggggtcaaggacgagcagcaacagtactcggacttcacgttcctgccgacggcgtccacggcgccggcgacgacgatggccggagccaccgcgacgacgtccaactccttcatgcaggactccatgctaatggctccattggtaagacgaacatcaagctcaacttctaaattattagtgcagagctaagaaattacgaacagggactgacatgtgggccagtagtcgcatggtagtgagtgatttatcacaaacttttttactaaaaaaaagtaatgataagcttatccggatcaacgacgtccttgcattattacgaatttcttgtggattgggaggttctcttttgacttttatgccaaagcatacatatatgatgaaatgcattaatatctcgcggccaagatatcttaatcaacatgtttttttaatgataagggacactcaggctagatttgcaaaagcaaacttcattttcacgttctccatgaaaacctaagcacataccattagtcaagcttgctacagttctaaactagatcaattagtcaaaactcccttggaaaaaataattaccctgcatgtgatgcactccaaaaaaaagatgcatgtatcattgatattgttgtgtttgcaatattgtagggaggggacccgtacaatggcgagcagcagcagccatggagctaccaagaaccgaccatggacgctgacactaggccagcggaattcacctcgtcggcggcggcgggtgacgtggccgggaacggcagctacagccaggtggcggcgccggcggcggccggcggcttccgtcagcagagccggcggtcgtcggacgacggctacaactggcgcaagtacgggcagaagcagatgaaggggagcgagaacccgcgcagctactacaagtgcaccttccctggctgcccgaccaagaagaaggtggagcagtcgccggacggccaggtcaccgagatcgtctacaagggcgcgcacagccaccccaagccgccgcagaacggccgcggccgcggcggctccggctacgcgctgcatggcggcgccgccagcgacgcatactcctccgccgacgcgctctccggcacgccggtggcgacgcccgagaactcgtcggcgtcgttcggggacgacgaggcggtcaacggcgtcagctcgtcgctgcgggtcgcctctagcgtcggcggcggcgaggatctcgacgacgacgagcctgattccaagaggtggaggagagacggcggcgacggcgagggcgtctcgctggtggccggcaaccggacggtgcgtgagccgagggtggttgtgcagacgatgagcgacatcgacatcctcgacgacggctaccggtggcgcaagtacgggcagaaggtggtcaagggcaacccaaacccaaggtacgttgcatgcgtgcgtaaacatatatcgatctgtcacgtaggtgttcgacgcgtgtacgtgtgggctgacatgcatctgtgctctatctgcaggagctactacaagtgcacgacggccgggtgccccgtgcggaagcacgtggagcgcgcgtccaacgacctgcgcgcggtgatcaccacgtacgagggcaagcacaaccacgacgtgcccgcggcgcgcgggagcgccgccgccgcgctctaccgcgccacgccgccgccgcaggcgagcaacgccggcatgatgcccaccacggcgcagccctcgagctacctgcagggcggcggcggcgtccttccggccggcgggtacggcgcgtcgtacggcggcgcgccgacgacgacgcagcccgcgaacggcggtggcttcgccgccctgtccggccggttcgacgacgacgcgacgggagcgtcttactcttacacgagccagcagcagcagcagccgaacgacgcggtgtactacgcgtcgagagccaaggatgagccgagagacgacggcatcatgtcgttctttgagcagccgctgctgttttgatcatctaatcgggccgtcaatttgatcagcatgcatgatccatggatgttgtgtacatgtgtatgtggagtgagttagcttagctccggtaaggtttgtgactttgtttcatttgtttcggaggcccgggccatgcagctgatgtctgcagaaagcagggtgaccttcgttttaacgcgttgcaattgcacagagggcgtatagggagaacgagaaaataattaagatcagtttttagctgcttaacttttttttttcaaatgaaaaatttgttgtagtatgcaaatgtaaactgtaaacacaatttggatatattgtattaaattattcatatgtccccattgtggtagatttaacatttcgttctatggctttgctatgtatgaattgtcaggcgttaatttgttgaagtac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0474800, RefSeq:Os05g0474800