Os05g0475600

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0475600| Description = FAR1 domain containing protein| Version = NM_001187536.1 GI:297724202 GeneID:9266182| Length = 3320 bp| Definition ...")
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Gene Name

Os05g0475600

Description

FAR1 domain containing protein

Version

NM_001187536.1 GI:297724202 GeneID:9266182

Length

3320 bp

Definition

Oryza sativa Japonica Group Os05g0475600, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23420109..23423428

Sequence Coding Region

23420109..23420283,23420609..23420676,23420764..23420963,23421043..23421931,23422379..23422800
,23422882..23423092,23423252..23423428

Expression

GEO Profiles:Os05g0475600

Genome Context

<gbrowseImage1> name=NC_008398:23420109..23423428 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23420109..23423428 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgaactcccgattcctgaaccaatgccatcacaattgcagaatacaggaacatgcggtacgttcgcattcttggatgatacttctgcccccatcatcatcatcatcatcatcatcaaatcctgctgagtccacagatccctctgatggcctgagaagaaatcaattagaagctgatgaaggaacaaatgaagctgctcatacaacaaaatatctggaagacttggtgccaaagattggcatgaaatttagctctgaacaagaagcttatgatttctacaatgcttatgctcttaagaaaggtttcagcattagaagaagcagctatcattacattggaaatactaaaattataaaaaacatgacattttgttgttctcgtcaaggaagtagaggtattgacaaaagagcagaagcttcaggctatggcgatagttttagtaagccagaaactcgatgcaaatgccaagcatgtatgaagataagtctcatagatggattctattctatctatcactttgtgcctgaacataaccataatcttgccactagaagtcaggctcatcagttaagatcacaaaggaagataaatgaagctcaagttgcaagcattgaagtcgcaaaatccatagggatttctactaaagcagctattgatttgatggcaaaacaagcttgtggatttgagaatctcgggtttactcgtgttgacataaagaataaattatactccaagaggtcactacaaaccaaacaaggtgatactgggggagtgttagaatatatggagaagaaagcatcagaagataactgcatatatgatcaggaagaggaagaagaatttttacgtgcatggggccaattgcttgaaaaatataagctccagcaaaatacatggttgcaacggatttttaagaaaagggagcaatgggcattagtatatggccggaacacgttttctgcggatatgagtaccacccaaagaaatgaaagcctgaataatgaattaaagggttatattagtgtgaagtatgacatgcttactttttttgagcactttgacagattggtgggagataaaagatatgaagaggtaaagtgtgactttagagcaacacaaagtacaccgaagctaaaggcggagttgagaattttgagatatgtagcagaagtttatactccagcagtttataagatatttgaggaagaggtaatgcagactttgaattgtgacatattctactgtggtgaggttgatgtagaaaaggtgtacaaaataaaggccaacggtaagcatcttgaacatgttgttagatactctccgttggaatccaatgttaaatgcagttgcaagaagtttgaatttgctggcatcttgtgctctcatgcactgaagatacttgacgtcaacaatattaaatcagttcctcaacaatatatattaaaaagatggacaattgatgcaaaagtattgcatataagtggcaacagcaatatgcatgatgaccctagaataaagatatcagatcgatactcctcattgtgtagaatgtttgttcgaatagcttctacagctgcaaaatctgaagaaacatactccatgtctactaattgtgctgaaaaattggcagaagatatagagaagttcttgagaatcagaagtgatccagatttagacaagtcgccttccccacaagttgggaaagaaaatcagatgcccaaaaagccaagaggcattaagctcaaggaaaagggcatccatggttcagctagacgtgttggtggcttagagaaagcatcatcgcagaggaagagaaagaagaaggatgacgatgttccggaccatgtgctagaaccacaacctgagatgcagtcacaaccacctgctacagtaatgggccatctggaggttcctagcaaccaaacttttttacatgtatcacagtactatgctgctctggaagcatctgaaaaacaaaggcaacaacattgggattgggatcttactgaacaaaatcaagtcacacgggctggattggatccacaggttggcgtaatacttgacgatgttagcatcgatcacatcatggaccttctcgatccaagctcatgcactttgatgcagctggacattgattaa</cdnaseq>

Protein Sequence

<aaseq>MMNSRFLNQCHHNCRIQEHAVRSHSWMILLPPSSSSSSSSNPAE STDPSDGLRRNQLEADEGTNEAAHTTKYLEDLVPKIGMKFSSEQEAYDFYNAYALKKG FSIRRSSYHYIGNTKIIKNMTFCCSRQGSRGIDKRAEASGYGDSFSKPETRCKCQACM KISLIDGFYSIYHFVPEHNHNLATRSQAHQLRSQRKINEAQVASIEVAKSIGISTKAA IDLMAKQACGFENLGFTRVDIKNKLYSKRSLQTKQGDTGGVLEYMEKKASEDNCIYDQ EEEEEFLRAWGQLLEKYKLQQNTWLQRIFKKREQWALVYGRNTFSADMSTTQRNESLN NELKGYISVKYDMLTFFEHFDRLVGDKRYEEVKCDFRATQSTPKLKAELRILRYVAEV YTPAVYKIFEEEVMQTLNCDIFYCGEVDVEKVYKIKANGKHLEHVVRYSPLESNVKCS CKKFEFAGILCSHALKILDVNNIKSVPQQYILKRWTIDAKVLHISGNSNMHDDPRIKI SDRYSSLCRMFVRIASTAAKSEETYSMSTNCAEKLAEDIEKFLRIRSDPDLDKSPSPQ VGKENQMPKKPRGIKLKEKGIHGSARRVGGLEKASSQRKRKKKDDDVPDHVLEPQPEM QSQPPATVMGHLEVPSNQTFLHVSQYYAALEASEKQRQQHWDWDLTEQNQVTRAGLDP QVGVILDDVSIDHIMDLLDPSSCTLMQLDID</aaseq>

Gene Sequence

<dnaseqindica>3146..3320#2753..2820#2466..2665#1498..2386#629..1050#337..547#1..177#atgatgaactcccgattcctgaaccaatgccatcacaattgcagaatacaggaacatgcggtacgttcgcattcttggatgatacttctgcccccatcatcatcatcatcatcatcatcaaatcctgctgagtccacagatccctctgatggcctgagaagaaatcaattagaagctgtaagatccctatctattctcctttacattttgttaaattagttgcatctaaactgtaagatccggacatgtgcacgtgcatatgaacaactatattcatcgttcctttttttttttttgcaattttttgatggaaactattaccacggataaaattaggatgaaggaacaaatgaagctgctcatacaacaaaatatctggaagacttggtgccaaagattggcatgaaatttagctctgaacaagaagcttatgatttctacaatgcttatgctcttaagaaaggtttcagcattagaagaagcagctatcattacattggaaatactaaaattataaaaaacatgacattttgttgttctcgtcaaggtaaattctttgtttctttttatagttacattaactttcaattagagacattttgtttcaattagtgcactgtattaacaggaagtagaggtattgacaaaagagcagaagcttcaggctatggcgatagttttagtaagccagaaactcgatgcaaatgccaagcatgtatgaagataagtctcatagatggattctattctatctatcactttgtgcctgaacataaccataatcttgccactagaagtcaggctcatcagttaagatcacaaaggaagataaatgaagctcaagttgcaagcattgaagtcgcaaaatccatagggatttctactaaagcagctattgatttgatggcaaaacaagcttgtggatttgagaatctcgggtttactcgtgttgacataaagaataaattatactccaagaggtcactacaaaccaaacaaggtgatactgggggagtgttagaatatatggagaagaaagcatcagaagatgtcaagtttttttattctattcaggttgatgaggatgacttaattacaaacattttctgggctgactctaaaatggttgccgactatgaagattttggtgatgttgtatgctttgacacaacatatagaaagttggatgacggacgcccttttggtttgcttgtaggagtgaataatcataagaagactactatttttggtgctgctcttctatatgatgagaccgctaatagttttgtctggttatttaaaacttttctaaatgtcatgtcaggaaagaagccaaaaacaattttgacagatgaagatgcagctatggctaaagcaattaaaatagttcttccataaactcatcatcggatatgtgtatggcacatgaatcagaatgcctgcaagcaccttgctgggtgtgttaaggactataagaaatttaatgctgactttcagaactgcatatatgatcaggaagaggaagaagaatttttacgtgcatggggccaattgcttgaaaaatataagctccagcaaaatacatggttgcaacggatttttaagaaaagggagcaatgggcattagtatatggccggaacacgttttctgcggatatgagtaccacccaaagaaatgaaagcctgaataatgaattaaagggttatattagtgtgaagtatgacatgcttactttttttgagcactttgacagattggtgggagataaaagatatgaagaggtaaagtgtgactttagagcaacacaaagtacaccgaagctaaaggcggagttgagaattttgagatatgtagcagaagtttatactccagcagtttataagatatttgaggaagaggtaatgcagactttgaattgtgacatattctactgtggtgaggttgatgtagaaaaggtgtacaaaataaaggccaacggtaagcatcttgaacatgttgttagatactctccgttggaatccaatgttaaatgcagttgcaagaagtttgaatttgctggcatcttgtgctctcatgcactgaagatacttgacgtcaacaatattaaatcagttcctcaacaatatatattaaaaagatggacaattgatgcaaaagtattgcatataagtggcaacagcaatatgcatgatgaccctagaataaagatatcagatcgatactcctcattgtgtagaatgtttgttcgaatagcttctacagctgcaaaatctgaagaaacatactccatgtctactaattgtgctgaaaaattggcagaagatatagagaagttcttgagaatcagaagtgatccagatttagacaagtcgccttccccacaaggttcgtatcaaagttctatatgttaattataagtaatattatagtctgaccgatacaattctaaacatattatttccagttgggaaagaaaatcagatgcccaaaaagccaagaggcattaagctcaaggaaaagggcatccatggttcagctagacgtgttggtggcttagagaaagcatcatcgcagaggaagagaaagaagaaggatgacgatgttccggaccatgtgctagaaccacaacctgagatgcagtcacaaccacctgctacagtaatggtatatttctcacataattaatctccaaaatcgcatgctcttgttatcatccctgacctttcctctgttttttttttgttatgttagggccatctggaggttcctagcaaccaaacttttttacatgtatcacagtactatgctgctctggaagcgtcaacacaccctttatttcatactcctatctcagtgactccagaaagtcaggggctgcaccaagggaggccatttcaacaatttgacactgatttccacaatatgttcccctgacctacttgcaatattaatttcttttagtgcaacaacatttcgtatttttaatttactgaacactgcaatgaagtttacttattagtagtaatatgtgtttttggtcagattttgaataaacgatgtgcaaactatacagcaatcctcttcaggccacaagatactatctaaatcatgcatagcattcagaagttgtcaaaaattgaacagatctgaaaaacaaaggcaacaacattgggattgggatcttactgaacaaaatcaagtcacacgggctggattggatccacaggttggcgtaatacttgacgatgttagcatcgatcacatcatggaccttctcgatccaagctcatgcactttgatgcagctggacattgattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0475600, RefSeq:Os05g0475600

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