Os05g0475700

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0475700| Description = Nodulin-like domain containing protein| Version = NM_001062367.1 GI:115464464 GeneID:4339096| Length = 2076 bp| Def...")
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Gene Name

Os05g0475700

Description

Nodulin-like domain containing protein

Version

NM_001062367.1 GI:115464464 GeneID:4339096

Length

2076 bp

Definition

Oryza sativa Japonica Group Os05g0475700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23432666..23434741

Sequence Coding Region

23432707..23433866,23434014..23434539

Expression

GEO Profiles:Os05g0475700

Genome Context

<gbrowseImage1> name=NC_008398:23432666..23434741 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23432666..23434741 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccttctccttcctcagctcattggctgagcttggtcggaagcgtctggctccagaccatcaacggcccgaacgccgacttcccggtgtactcgtcgcagctcaaggaggtgaagggcatctcccaggtgcagctcaacttcctcgccttcgcctccgacgccgggaagctcttcggctggttcgccggcgtcgccgccctgtacctgcccctgtggctcgtcgccgtcgtcggcgcgtcgttcgggcttgtcgggtatggcgtccagttcctcttcttggagaggcccgggctcgcgtactggcacctgttcctgctcacctccctcgccggcaacggcatctgctggatcaacacggtgtgctacctcctctgcatcaagaacttcccgtcggacagccgcgtcgcggtgagcctcgcgacgagctacctcggcctgagcgccaagctctacaccaccatggccgagaagatgccccggggcgccacggcgaggtactccaaggagaaggtgtacctcctcctcaatgccgtcgtgccgatgctcgtcaccctcgtggcggcgccgtcgctccgggtggtggagctcaccagccaccgccggaccgacccggcgttcctcgccatgttcgcgattaccctcgccaccggagcctgcgccgtcgtcggcagcatcggctccaagtccatcgggctctcgaccagcgagcacatgatcagcctctacatcctgctcgccctcccggtgctcatcccggcggcgctcaaggtgcgggagagcatggacaagctacgggaggcgaagcgggagaacagagtgcacgacgtcgccgccgccaccgacgtgccggagacggccgtgtcggtgctcgaggtggccgaggcggcggagaacaaggaggaggacgacgccgccgccggcgagagcggcggccaagacgaggtcggcggcatccggctgctgcggcggctcgacttctggctctacttcctgagctacatgttcagtggcacgctggggttggtcttcctcaacaacctggggcagatcgccgagtcccgcgggctcagcgacccgtccactctcgtctccctgtcgtcctccttcggattcttcggccgcctccttcccgccttcttggattactacaccgcaaagagtggctactcgctgtcaaggacggcgtccatggcggcgctgatggcgccgatggcgggggcgttcttcctgctgctggacccgagggacatgttcctgtacaccagcacggcggtggtcgggacctgcaccggcgccatcacgtcggtggcggtgtcggcgacgggggagctgttcgggaggaagaacttcggggtgaaccacaacgtgctcgtcgccaacatccccgtcggctcgctctgcttcggctacctcgccgcgttcctctaccagcgggaggcccgcggcgccagccgctgcgccggcgccgcctgctaccggggcaccttcctcgtctggggcgccacgtgcgccgtcgggacggcgctctgcaccgtgctgtacgcgaggtcgcgcggcttcgccgggaggctaccgccgccggcgaggtcgacgacgatgccatgcgccggccagcggccagcgactaacttaggagatgataacaagggaccagaaccagaagtttctagtacagcagtttaa</cdnaseq>

Protein Sequence

<aaseq>MPSPSSAHWLSLVGSVWLQTINGPNADFPVYSSQLKEVKGISQV QLNFLAFASDAGKLFGWFAGVAALYLPLWLVAVVGASFGLVGYGVQFLFLERPGLAYW HLFLLTSLAGNGICWINTVCYLLCIKNFPSDSRVAVSLATSYLGLSAKLYTTMAEKMP RGATARYSKEKVYLLLNAVVPMLVTLVAAPSLRVVELTSHRRTDPAFLAMFAITLATG ACAVVGSIGSKSIGLSTSEHMISLYILLALPVLIPAALKVRESMDKLREAKRENRVHD VAAATDVPETAVSVLEVAEAAENKEEDDAAAGESGGQDEVGGIRLLRRLDFWLYFLSY MFSGTLGLVFLNNLGQIAESRGLSDPSTLVSLSSSFGFFGRLLPAFLDYYTAKSGYSL SRTASMAALMAPMAGAFFLLLDPRDMFLYTSTAVVGTCTGAITSVAVSATGELFGRKN FGVNHNVLVANIPVGSLCFGYLAAFLYQREARGASRCAGAACYRGTFLVWGATCAVGT ALCTVLYARSRGFAGRLPPPARSTTMPCAGQRPATNLGDDNKGPEPEVSSTAV</aaseq>

Gene Sequence

<dnaseqindica>42..1201#1349..1874#agaggctgtaggtagctagagaggaaaaatccacgctagctatgccttctccttcctcagctcattggctgagcttggtcggaagcgtctggctccagaccatcaacggcccgaacgccgacttcccggtgtactcgtcgcagctcaaggaggtgaagggcatctcccaggtgcagctcaacttcctcgccttcgcctccgacgccgggaagctcttcggctggttcgccggcgtcgccgccctgtacctgcccctgtggctcgtcgccgtcgtcggcgcgtcgttcgggcttgtcgggtatggcgtccagttcctcttcttggagaggcccgggctcgcgtactggcacctgttcctgctcacctccctcgccggcaacggcatctgctggatcaacacggtgtgctacctcctctgcatcaagaacttcccgtcggacagccgcgtcgcggtgagcctcgcgacgagctacctcggcctgagcgccaagctctacaccaccatggccgagaagatgccccggggcgccacggcgaggtactccaaggagaaggtgtacctcctcctcaatgccgtcgtgccgatgctcgtcaccctcgtggcggcgccgtcgctccgggtggtggagctcaccagccaccgccggaccgacccggcgttcctcgccatgttcgcgattaccctcgccaccggagcctgcgccgtcgtcggcagcatcggctccaagtccatcgggctctcgaccagcgagcacatgatcagcctctacatcctgctcgccctcccggtgctcatcccggcggcgctcaaggtgcgggagagcatggacaagctacgggaggcgaagcgggagaacagagtgcacgacgtcgccgccgccaccgacgtgccggagacggccgtgtcggtgctcgaggtggccgaggcggcggagaacaaggaggaggacgacgccgccgccggcgagagcggcggccaagacgaggtcggcggcatccggctgctgcggcggctcgacttctggctctacttcctgagctacatgttcagtggcacgctggggttggtcttcctcaacaacctggggcagatcgccgagtcccgcgggctcagcgacccgtccactctcgtctccctgtcgtcctccttcggattcttcggccgcctccttcccgccttcttggattactacaccgcaaagtaagcaaccaagctgcatgcatgcatgcatgtgccgatcaaatcaaatcactcgtgttttttacaacttgtttaaatgttggagtctttgtttatgcatgtcctgacaggggatgaatttttggtttgggttttgactatgcgcaggagtggctactcgctgtcaaggacggcgtccatggcggcgctgatggcgccgatggcgggggcgttcttcctgctgctggacccgagggacatgttcctgtacaccagcacggcggtggtcgggacctgcaccggcgccatcacgtcggtggcggtgtcggcgacgggggagctgttcgggaggaagaacttcggggtgaaccacaacgtgctcgtcgccaacatccccgtcggctcgctctgcttcggctacctcgccgcgttcctctaccagcgggaggcccgcggcgccagccgctgcgccggcgccgcctgctaccggggcaccttcctcgtctggggcgccacgtgcgccgtcgggacggcgctctgcaccgtgctgtacgcgaggtcgcgcggcttcgccgggaggctaccgccgccggcgaggtcgacgacgatgccatgcgccggccagcggccagcgactaacttaggagatgataacaagggaccagaaccagaagtttctagtacagcagtttaacaaattaattaggtgccacgtaattaattaagtggagaaaaaaatctacagctagtgatgtggagtaggatttgatgatttgcctttttttttcctctgggaaaaatattttgtttcattagtttctttttctaatctttttgagtaatcccatggtggattgagaagctcaacttgtgtgtacgtatatacgtatatggcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0475700, RefSeq:Os05g0475700