Os05g0476400

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0476400| Description = Conserved hypothetical protein| Version = NM_001062371.1 GI:115464472 GeneID:4339100| Length = 2333 bp| Definition ...")
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Gene Name

Os05g0476400

Description

Conserved hypothetical protein

Version

NM_001062371.1 GI:115464472 GeneID:4339100

Length

2333 bp

Definition

Oryza sativa Japonica Group Os05g0476400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23481305..23483637

Sequence Coding Region

23481976..23482185,23482806..23482855,23483148..23483334

Expression

GEO Profiles:Os05g0476400

Genome Context

<gbrowseImage1> name=NC_008398:23481305..23483637 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23481305..23483637 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgccggcctgcggcatggggtcgtcgagacggccgaggagatggagcggcggatccaaactcgccgtcgcatgcctcgcggcggttgcggtgacctccctgcagctgtgctgcctctccggctgcttcatcgctgcgtgcggcggcgccggcagggacgacgacgacgtgcgccgttactccgatcatttcgggaggctggaaggagcaggagcccattccggcgaccttctggaaggtggtggtcactaccacgtcgggttggggcgtcggctgctgtcgggagggccagggtcgcacccgccgcggtgcacgtccaagtgcggcagctgcagcccgtgctcccccgtgcacgtgtccgtcccccccggcgtcctcgtcaccaccgagtactaccccgaggcctggcgctgcaagtgccgcaaccgcctctacatgccgtga</cdnaseq>

Protein Sequence

<aaseq>MMPACGMGSSRRPRRWSGGSKLAVACLAAVAVTSLQLCCLSGCF IAACGGAGRDDDDVRRYSDHFGRLEGAGAHSGDLLEGGGHYHVGLGRRLLSGGPGSHP PRCTSKCGSCSPCSPVHVSVPPGVLVTTEYYPEAWRCKCRNRLYMP</aaseq>

Gene Sequence

<dnaseqindica>1453..1662#783..832#304..490#actcccagttgtgacgcagctacagtcgccgagagcaagacgaaaggcaagcacgcgcacccacccacacacgggcgcgcgcacgtacaaagcccctcgtctccgtgtcttcttcctccccgcgcctgcaacaaaccggccagcccagccagccggtcggccgcttccgccatcacctttgccattttgctgatctcgatctcttccttcctcagccactagctggcttactaccactccaaagggtggaagtggaagctagggagagctagctagctcgttttcttaacttctagctagctgatgatgccggcctgcggcatggggtcgtcgagacggccgaggagatggagcggcggatccaaactcgccgtcgcatgcctcgcggcggttgcggtgacctccctgcagctgtgctgcctctccggctgcttcatcgctgcgtgcggcggcgccggcagggacgacgacgacgtgcgccgttactccggtaagcatatgctgtgtgagatgtagctagcacttgagagttgagagctgattcttggcagctctcctgctctttgcgtgcaaagattctgtactagctagaaagcgagttttttggtgtttggtgtatctcctttggctgcagaatcaagtatcaactgatctctgcggatctgagagaagaaccccactagagatatgttgatgcttgtgctgctgcacagaactctacgtctttttagcacgttttggcgataggagttaactcgtttcagttgcctctcgctgaacagatcatttcgggaggctggaaggagcaggagcccattccggcgaccttctggtgagttctgcatctcccctactagctaaagagcagcggtagtagcagaaaaccaccgtgtcagtctcctcacaggctaggcatcttgcactgtgcttcgctagtcgtttgacgccagcagctgaatagctgatgatacactacatgctgatgacgagtcaaatcacacgactgaaagtttcaaacagatccctatcatatactccatcctccacccgtacgtcttaaaatatactccctctatcttggaacatagcaatctagaatcgaattggacatattctagtactacgaatccagacagggggaaagggcatatccagtttcgtattactagaatatattccatccgattctaggttactatattctaaaatagagggagtagcaacttaggatgtgtctcaatcttataactatgaatgtgaacatcagttcatgtagattcatctatagatgcttatacatatgcaaagatctcaatggtccctgcacaaccatcaacacgagcagcacggcgaatctcagctgctcacgacgacggcggtggcctggccggcgcatagatcgacgacgcatatggctggttaaattaactggtgttgcgtgtgtgcatgcaggaaggtggtggtcactaccacgtcgggttggggcgtcggctgctgtcgggagggccagggtcgcacccgccgcggtgcacgtccaagtgcggcagctgcagcccgtgctcccccgtgcacgtgtccgtcccccccggcgtcctcgtcaccaccgagtactaccccgaggcctggcgctgcaagtgccgcaaccgcctctacatgccgtgacgactccacaccccccacccctctacgtacgccgtctcgatccaaccgcacgagaccaccgagatggcgccgtgacacaacaggtaggcgcaccgtccgcccgtcgtctctgccgctgcatcatcgcgtccggtgcggcatgcctctctttctctctctttctctcgccgtctcgcgcgcgcgcgtgggggcatgcgtgcatgggtggtgcaggtggggcgcggggcgcgtgacggatggtggcgcggtggactggcctaccacgcgcgcgcggtggcacggcgcatgcacggcggcagctgggggggccggggcctgggccagcgtgatcgtctctgaaaactgtggcattgcagtgtggcttttggttgggcctaccacgaggcgatggcgcagaggagagatgaggaggaaagctgctgcccccaggcgcctcttcatgtgatccctgcgcacatcattcttggctacctagtgaaaaactgaaaaacacagtaccaccaccggccgagtccctttgccatgttatacatatatatatctccccttttttttttcactcctagttatctcccggtgctttcagttctcgcatcatgcctgcacggggcatgcaacagatcgatcaagtgtacatttctcatttgtaacaagactcatcgtcgtctatc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0476400, RefSeq:Os05g0476400