Os05g0479800

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0479800| Description = Disease resistance protein family protein| Version = NM_001062384.1 GI:115464498 GeneID:4339113| Length = 3560 bp| ...")
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Gene Name

Os05g0479800

Description

Disease resistance protein family protein

Version

NM_001062384.1 GI:115464498 GeneID:4339113

Length

3560 bp

Definition

Oryza sativa Japonica Group Os05g0479800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23633986..23637545

Sequence Coding Region

23633987..23634813,23635165..23637280

Expression

GEO Profiles:Os05g0479800

Genome Context

<gbrowseImage1> name=NC_008398:23633986..23637545 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23633986..23637545 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctggagaaggagtacagcaagcacaagggcctcgcgcaagaagcccagtccctccagctcgacctccgcatgatcgccgccgtcatggacgaccagctccgcgccatggggagggcgacgacggccgacgcccgcacggccgtcgcgcggctccacgccgaggagatgctcgacctcgcgcacgacgtcgaggagtgcgtcgaccgcttcctgcaccgcctcacctgcaggcagcaccgcggcggcgccggcgccggagcgtcgtcgtcgtccttggtgcggcggatggcgcacgagctcagcaaggtccagagccggtcgagcttcgccgacgagatccagaggctcaagacgcgcgtcagggaagcgcagcagcggatcatccgcatgaaacctactttggatgtcctcgccggcggtggcggtggcggcggccaactcacaggcgctgccggcacatcgtcgacggcgccgtcgtgccgcgcgtcgcgcatcccggtgggcatcgcggagcccgtggaggagctcctgtcgatgctggacgaggtggacggcgagccggagcagatgagggtcatctccgtcgtcggattcggtggctccgggaagaccaccctcgtgaaggcggtctacgatgatcctcgcgcaaaggacagattctcccgccgcgcgtgggtcaccgtcggtagctcgccgtcgccggagaccagcaatgggatgaaggggatcctgcgtgctgtattccagcaggttcttcccaaagacgccatggatgctgacggacagcatcttgaaacctcgctcaaagaatacctgaaggacaagaggtatttaattatcatcgatgacatcgggatggatcaatggaacatcataagatcgacctttgaagacaatggtacaagcagcaggataatactgaccacaaccatccagtctgtggcaaatatgtgcagccatggcaatggctatgtgtatcaaatgaacacacttggtgaagaagactctaaggaactcgcttttccagggtttagatcacctgagttggagcaaggttcagcatcattattggggaaatgtgatggtcttcctcttgctctggtcagtgtctccgattatctgaagagctcaaatgagcccacaggagagctgtgcgcaaagctgtgccgcaaccttggttctcatctgaaagagcaggatggccattacagcttttcagaactcagaaaggtgctccttgacaactatgacagtttttctggctatcctttgagctgcttgctgtatcttggaatatttccaaacaatcgaccactcaagaagaaagttgtaatcaggcggtggttagccgaaggatatgcacgaaccgactctcttcgtagcgaagaggatattgctgatgagaatttcagtaagcttattgaccggaatatcattcagcctgttgacacaagaaacaattctgaagtgaaaacctgcaaaactcatggaattatgcacgagtttttgctgaacaagtccttgtcacagatattcatcgcgaaatcgtctcgtgatcatccaagactaggtgtcaatactaatgcgtgccacctttcttttcattctggtgaactgacagagtgtgtggcatctgatgaagagttatctcgtgtccggtctctgacagtctttgggcatgcaggtgatgcaatttgttatgttcgcaggtgcaaactgatacgagtcttggatctacaggaatgcagtgatttggatgacgatcatctgaaatacatatgcaaattatggcatctgaaatacctgagctttgggagcaatatcagtgagcttccaaggagcattgatggactgcattgtttagagacactggatttaaggaggacccagataaagtttttgcccattgaagcaatcatgctgccccacttagctcacctgtttggaaagtttatgcttcatgaagatgatgtgaagagtgtgaacaagatgagtaaactacaaaaattcttttcttccaaaaagagcaatctgcaaactttagcaggatttatcactgacgaaagcaaaggttttctgcaacatattggtcatatgaacaagctgaggaaggttaagatatggttcaaacatgtcgaaggcagcaacaattacatcgctgatctttcacgggccattcaggaattcaccaaggctcccattgacagggatactgaccgttctctctcacttgattctgaagaatgccctgaaaatttcctgagttcacttgatttggagacatgctctgaaggttccaaatatgctctgaggtcgctaaagttaaatggcgaacttcacaagttgcctccatttgttaatttgttgtcaggtctcactgagctttgcatttcatcacctatgctgacacaggttcatctatcaacgctgatcaatctgaacagactgctctacctcaaactggttgcatataagctcgagaatttcgaaataaaacatggagcattcccgagcttgcgacgcctgtgctttgtagtgaaaagtgtcacttcagctctgcccacaatcaagcatggagctctcccaaatatcatatcacttcagctgctctgtcaaggtccagttggtctttctggcatcgagatcagacacatgaaacatctcaaggaaatcacaattaactctggagtggttgtacaatgggaacaggcagcaaagaaccacccaaataggcctaaagttttgttcctcagaaaggttgatccaatggaaagcgaggaacggggaagaccttgtgccataagggagcagatgaaaattactgtagctcaaccaactagttcaggtgatggactgaactctagcctcaataagatcagactttcagagcctccttcttcacgacttgagatgcctgttcgtcatatggtggatggccactga</cdnaseq>

Protein Sequence

<aaseq>LEKEYSKHKGLAQEAQSLQLDLRMIAAVMDDQLRAMGRATTADA RTAVARLHAEEMLDLAHDVEECVDRFLHRLTCRQHRGGAGAGASSSSLVRRMAHELSK VQSRSSFADEIQRLKTRVREAQQRIIRMKPTLDVLAGGGGGGGQLTGAAGTSSTAPSC RASRIPVGIAEPVEELLSMLDEVDGEPEQMRVISVVGFGGSGKTTLVKAVYDDPRAKD RFSRRAWVTVGSSPSPETSNGMKGILRAVFQQVLPKDAMDADGQHLETSLKEYLKDKR YLIIIDDIGMDQWNIIRSTFEDNGTSSRIILTTTIQSVANMCSHGNGYVYQMNTLGEE DSKELAFPGFRSPELEQGSASLLGKCDGLPLALVSVSDYLKSSNEPTGELCAKLCRNL GSHLKEQDGHYSFSELRKVLLDNYDSFSGYPLSCLLYLGIFPNNRPLKKKVVIRRWLA EGYARTDSLRSEEDIADENFSKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSL SQIFIAKSSRDHPRLGVNTNACHLSFHSGELTECVASDEELSRVRSLTVFGHAGDAIC YVRRCKLIRVLDLQECSDLDDDHLKYICKLWHLKYLSFGSNISELPRSIDGLHCLETL DLRRTQIKFLPIEAIMLPHLAHLFGKFMLHEDDVKSVNKMSKLQKFFSSKKSNLQTLA GFITDESKGFLQHIGHMNKLRKVKIWFKHVEGSNNYIADLSRAIQEFTKAPIDRDTDR SLSLDSEECPENFLSSLDLETCSEGSKYALRSLKLNGELHKLPPFVNLLSGLTELCIS SPMLTQVHLSTLINLNRLLYLKLVAYKLENFEIKHGAFPSLRRLCFVVKSVTSALPTI KHGALPNIISLQLLCQGPVGLSGIEIRHMKHLKEITINSGVVVQWEQAAKNHPNRPKV LFLRKVDPMESEERGRPCAIREQMKITVAQPTSSGDGLNSSLNKIRLSEPPSSRLEMP VRHMVDGH</aaseq>

Gene Sequence

<dnaseqindica>2..828#1180..3295#gctggagaaggagtacagcaagcacaagggcctcgcgcaagaagcccagtccctccagctcgacctccgcatgatcgccgccgtcatggacgaccagctccgcgccatggggagggcgacgacggccgacgcccgcacggccgtcgcgcggctccacgccgaggagatgctcgacctcgcgcacgacgtcgaggagtgcgtcgaccgcttcctgcaccgcctcacctgcaggcagcaccgcggcggcgccggcgccggagcgtcgtcgtcgtccttggtgcggcggatggcgcacgagctcagcaaggtccagagccggtcgagcttcgccgacgagatccagaggctcaagacgcgcgtcagggaagcgcagcagcggatcatccgcatgaaacctactttggatgtcctcgccggcggtggcggtggcggcggccaactcacaggcgctgccggcacatcgtcgacggcgccgtcgtgccgcgcgtcgcgcatcccggtgggcatcgcggagcccgtggaggagctcctgtcgatgctggacgaggtggacggcgagccggagcagatgagggtcatctccgtcgtcggattcggtggctccgggaagaccaccctcgtgaaggcggtctacgatgatcctcgcgcaaaggacagattctcccgccgcgcgtgggtcaccgtcggtagctcgccgtcgccggagaccagcaatgggatgaaggggatcctgcgtgctgtattccagcaggttcttcccaaagacgccatggatgctgacggacagcatcttgaaacctcgctcaaagaatacctgaaggacaagaggttagtgcacatttaacatttttcttttttttttgaactactttcatatgcaaaatttaacttttaattggacttttgctcctcattcatcaatttgactgtcgtgtgtatatattgatcagggttcactgttttggaatcccaaaaaaaaaatcagggaaaggaaatttcagacaaaaaaatagttttgaaaacttctttgctaaattcaaacaaattctgaaaacaggcactcaccggtggacacaaatatttgaatcaagattatgaaccctgttaccctgatactgatcagcagaatttatgttttaccacttaattttgctactcatttctcaatttggttattaggtatttaattatcatcgatgacatcgggatggatcaatggaacatcataagatcgacctttgaagacaatggtacaagcagcaggataatactgaccacaaccatccagtctgtggcaaatatgtgcagccatggcaatggctatgtgtatcaaatgaacacacttggtgaagaagactctaaggaactcgcttttccagggtttagatcacctgagttggagcaaggttcagcatcattattggggaaatgtgatggtcttcctcttgctctggtcagtgtctccgattatctgaagagctcaaatgagcccacaggagagctgtgcgcaaagctgtgccgcaaccttggttctcatctgaaagagcaggatggccattacagcttttcagaactcagaaaggtgctccttgacaactatgacagtttttctggctatcctttgagctgcttgctgtatcttggaatatttccaaacaatcgaccactcaagaagaaagttgtaatcaggcggtggttagccgaaggatatgcacgaaccgactctcttcgtagcgaagaggatattgctgatgagaatttcagtaagcttattgaccggaatatcattcagcctgttgacacaagaaacaattctgaagtgaaaacctgcaaaactcatggaattatgcacgagtttttgctgaacaagtccttgtcacagatattcatcgcgaaatcgtctcgtgatcatccaagactaggtgtcaatactaatgcgtgccacctttcttttcattctggtgaactgacagagtgtgtggcatctgatgaagagttatctcgtgtccggtctctgacagtctttgggcatgcaggtgatgcaatttgttatgttcgcaggtgcaaactgatacgagtcttggatctacaggaatgcagtgatttggatgacgatcatctgaaatacatatgcaaattatggcatctgaaatacctgagctttgggagcaatatcagtgagcttccaaggagcattgatggactgcattgtttagagacactggatttaaggaggacccagataaagtttttgcccattgaagcaatcatgctgccccacttagctcacctgtttggaaagtttatgcttcatgaagatgatgtgaagagtgtgaacaagatgagtaaactacaaaaattcttttcttccaaaaagagcaatctgcaaactttagcaggatttatcactgacgaaagcaaaggttttctgcaacatattggtcatatgaacaagctgaggaaggttaagatatggttcaaacatgtcgaaggcagcaacaattacatcgctgatctttcacgggccattcaggaattcaccaaggctcccattgacagggatactgaccgttctctctcacttgattctgaagaatgccctgaaaatttcctgagttcacttgatttggagacatgctctgaaggttccaaatatgctctgaggtcgctaaagttaaatggcgaacttcacaagttgcctccatttgttaatttgttgtcaggtctcactgagctttgcatttcatcacctatgctgacacaggttcatctatcaacgctgatcaatctgaacagactgctctacctcaaactggttgcatataagctcgagaatttcgaaataaaacatggagcattcccgagcttgcgacgcctgtgctttgtagtgaaaagtgtcacttcagctctgcccacaatcaagcatggagctctcccaaatatcatatcacttcagctgctctgtcaaggtccagttggtctttctggcatcgagatcagacacatgaaacatctcaaggaaatcacaattaactctggagtggttgtacaatgggaacaggcagcaaagaaccacccaaataggcctaaagttttgttcctcagaaaggttgatccaatggaaagcgaggaacggggaagaccttgtgccataagggagcagatgaaaattactgtagctcaaccaactagttcaggtgatggactgaactctagcctcaataagatcagactttcagagcctccttcttcacgacttgagatgcctgttcgtcatatggtggatggccactgaggcagcaccccagacttccttggcaaacctctagcacaatataccactgcagctggcagacttcaatgaagaccatccaaattttgctaaaaaaacttggaaatctagattgctgttcagttaaatggtccagatttctgtatttccgtacttgtcatgttatgtggttaaggttgtaaattggcccggttttttgtaagttcagggtgttaaataaccatattttaaattcttaaaatacaatgatctgtgattggaggtgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0479800, RefSeq:Os05g0479800