Os05g0484000

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0484000| Description = Protein of unknown function DUF295 family protein| Version = NM_001062404.1 GI:115464538 GeneID:4339134| Length = 17...")
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Gene Name

Os05g0484000

Description

Protein of unknown function DUF295 family protein

Version

NM_001062404.1 GI:115464538 GeneID:4339134

Length

1751 bp

Definition

Oryza sativa Japonica Group Os05g0484000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23848558..23850308

Sequence Coding Region

23848875..23850230

Expression

GEO Profiles:Os05g0484000

Genome Context

<gbrowseImage1> name=NC_008398:23848558..23850308 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23848558..23850308 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcacaacgacgaagcgtcctcgtcgcgttccaccacctcctccgccgcccaaccctcgccaccatcacgcctcgcccccgcctccgccttcgcctctcccatggacgcggcggcgcccgcgcgtgacttcatggcggaagccctccgcctcgtccacaaccgcctcacgtgcctcgtcgaccgccgcaccatggcccgcgtctgccacgactggcgcgtcgccgtcaagccgctgcagcacgcgccgcatcgccgcccgctcccgtggatcctcgtcccgcgcgccgacggcccttccttctcgtgcgccctccgcggctgcggcggacacggcctcggcgtcccgcacgacgcccgcgccgcgcgctgcttcggcgcctacgacggtggctggctcttcctcgccttccgcgagaccttccgccacaagctcctcagcctccgcgacgttcagctgcgcctccgcctccccttctttgtccgcccggacatgacggctgctgaattggggcggcctgtcccttacattggtatggtcatgctcgccgcgaccctctcttcgccaccggaggacgaggattgcgtcggcgccgccatcatcacctacgggccctacgaggctggtcgacgcactcacgcattctggcgcgtgcagtcagcgaaggctttcccggatcaggctgcggcgatgggtcatggctccgatgccatcgacgagccagctctggaggatgtcatacaccacaagggggccttccttttcctcatcacagaagaagacctccatgttttcgcagtacgggatttccatgaagacggcaaaggcaacatgaagatggcgcccagggcgattcgtcgcttctcgcgaggtgggcgcgattatggcggagacatcgttgtccgctacctggtggagtcccgcggcaatctcctcatggtggtcaggcgcgttcctgatcgtctacacgcgccgccgaggacgtccgcgttcaaggtgttcgagatggtggagccgccgtcggggacgcgcatcgaggccctgtacgcgtggaacgagctggaatcgctgggtgggcggatgctgttcgtcgcgcgaggctgctccagatcgtacgacgcgggcgactatccgggcgatgagttcggcgagggcgtctacttcctggatgacgggaggctctaccgcgagtcggcagtgttcacggctcggcggcggcgacggcgatatccctgcagagacaccggcaagtggctaccggcggcggatgcggcgggggttcctcgtgtggacaagttcttgccggagcaaggcccgtcggactactcaccgccggggtggcttctcccctga</cdnaseq>

Protein Sequence

<aaseq>MAHNDEASSSRSTTSSAAQPSPPSRLAPASAFASPMDAAAPARD FMAEALRLVHNRLTCLVDRRTMARVCHDWRVAVKPLQHAPHRRPLPWILVPRADGPSF SCALRGCGGHGLGVPHDARAARCFGAYDGGWLFLAFRETFRHKLLSLRDVQLRLRLPF FVRPDMTAAELGRPVPYIGMVMLAATLSSPPEDEDCVGAAIITYGPYEAGRRTHAFWR VQSAKAFPDQAAAMGHGSDAIDEPALEDVIHHKGAFLFLITEEDLHVFAVRDFHEDGK GNMKMAPRAIRRFSRGGRDYGGDIVVRYLVESRGNLLMVVRRVPDRLHAPPRTSAFKV FEMVEPPSGTRIEALYAWNELESLGGRMLFVARGCSRSYDAGDYPGDEFGEGVYFLDD GRLYRESAVFTARRRRRRYPCRDTGKWLPAADAAGVPRVDKFLPEQGPSDYSPPGWLL P</aaseq>

Gene Sequence

<dnaseqindica>79..1434#ggccttctctgcttcttccaaacctcccattcactctgttcccctctcttcccctgcttccagaagccaagttcaaacatggcgcacaacgacgaagcgtcctcgtcgcgttccaccacctcctccgccgcccaaccctcgccaccatcacgcctcgcccccgcctccgccttcgcctctcccatggacgcggcggcgcccgcgcgtgacttcatggcggaagccctccgcctcgtccacaaccgcctcacgtgcctcgtcgaccgccgcaccatggcccgcgtctgccacgactggcgcgtcgccgtcaagccgctgcagcacgcgccgcatcgccgcccgctcccgtggatcctcgtcccgcgcgccgacggcccttccttctcgtgcgccctccgcggctgcggcggacacggcctcggcgtcccgcacgacgcccgcgccgcgcgctgcttcggcgcctacgacggtggctggctcttcctcgccttccgcgagaccttccgccacaagctcctcagcctccgcgacgttcagctgcgcctccgcctccccttctttgtccgcccggacatgacggctgctgaattggggcggcctgtcccttacattggtatggtcatgctcgccgcgaccctctcttcgccaccggaggacgaggattgcgtcggcgccgccatcatcacctacgggccctacgaggctggtcgacgcactcacgcattctggcgcgtgcagtcagcgaaggctttcccggatcaggctgcggcgatgggtcatggctccgatgccatcgacgagccagctctggaggatgtcatacaccacaagggggccttccttttcctcatcacagaagaagacctccatgttttcgcagtacgggatttccatgaagacggcaaaggcaacatgaagatggcgcccagggcgattcgtcgcttctcgcgaggtgggcgcgattatggcggagacatcgttgtccgctacctggtggagtcccgcggcaatctcctcatggtggtcaggcgcgttcctgatcgtctacacgcgccgccgaggacgtccgcgttcaaggtgttcgagatggtggagccgccgtcggggacgcgcatcgaggccctgtacgcgtggaacgagctggaatcgctgggtgggcggatgctgttcgtcgcgcgaggctgctccagatcgtacgacgcgggcgactatccgggcgatgagttcggcgagggcgtctacttcctggatgacgggaggctctaccgcgagtcggcagtgttcacggctcggcggcggcgacggcgatatccctgcagagacaccggcaagtggctaccggcggcggatgcggcgggggttcctcgtgtggacaagttcttgccggagcaaggcccgtcggactactcaccgccggggtggcttctcccctgagattgctcatgttacttttgatcgtcctggtacaggtatgattcgctgttgatttgatcctccgagatgtggtttagtttgcagccgttgtactttgtcccgtcccgtctcctcttgctgcgatggattagtgtagtttcagtcaacagttgcagtttcagtctagatttgatgtcataatcatggattggtagttgctatgatgctggagaaattctccttttgtagcagaaaatgttttcaagtcagaactacatgaatcgtgaacgcagtatgaaactatgaatttgtgtgatctgatgctgcagtgaatcaag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0484000, RefSeq:Os05g0484000