Os05g0482700

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0482700| Description = Similar to 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-indepe...")
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Gene Name

Os05g0482700

Description

Similar to 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I)

Version

NM_001062403.1 GI:115464536 GeneID:4339133

Length

4653 bp

Definition

Oryza sativa Japonica Group Os05g0482700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23795912..23800564

Sequence Coding Region

23796058..23796222,23796340..23796495,23796600..23796695,23796778..23796970,23797212..23797636
,23797787..23797990,23798117..23798267,23798876..23799003,23799485..23799646

Expression

GEO Profiles:Os05g0482700

Genome Context

<gbrowseImage1> name=NC_008398:23795912..23800564 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23795912..23800564 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaagctcagatttctcgtggacattgcctgatcacccaaagctccctaaggggaagccggtggccgtggttgtactggatggatggggtgaggctgatgcggaccagtataactgcatccatgttgctgagacaccaacaatggattcgctcaagaagggtgctccagagaagtggaagcttgtaaaggctcatggaacagctgttggtctcccttctgatgatgacatgggtaacagtgaggttgggcataacgcacttggtgctggtcggatttttgctcaaggggctaaacttgtggatactgctttggcctctggaaaaatttttgaaggagaagggtttaagtacattaaggagagttttgaccaaggcactcttcatcttattgggttgttgagcgacggaggtgtccactcacggcttgaccagttgcagttgctcctgaatggtgcaagtgcgaatggagcgaaaaaaatccgtgttcacattcttactgatggacgtgatgttttggatggcacaagcgttggttttgttgaaacgctagagaatgatctttctcaactgcgtgccaagggcattgatgcgtgcattgcatcaggtggtggaaggatgtatgttaccatggaccgatatgagaatgactgggatgttgttaaacgtggatgggatgctcaggtgcttggagaagcacctcacaagttccaaaacgctgttgaagctgtgaaaacactccggtcagagaccaaggctaatgatcagtatcttcccccatttgtgattgttgacgatagtgacaaggctgttgggcctatagtagatggtgatgcagttgtgaccttcaatttccgtgctgatcgcatggttatgattgctaaggctttagagtatgaagattttgataaatttgatcgtgttcgtgtcccaaagatccgatatgctggtatgcttcagtatgatggtgagctgaagcttccaagccactaccttgtttcaccaccagagattgagaggacatccggtgaatacttggtgaaaaatggcatccgcacctttgcttgcagtgaaactgtgaagttcggccatgtcacatttttctggaatggaaaccgctctggatacttcgatgaaacaaaggaagagtatgtggaaatccctagtgacagtggtatcacattcaatgttaaacccaagatgaaggcccttgagattgctgagaaagctagagatgctatccttagtggcaagtttgaccaggtccgcgttaacctcccaaatggtgatatggtgggtcacactggtgacattgaggccacagtggttgcttgcaaagctgctgatgaggctgtcaagatgattctggatgccattgagcaagtgggtggcatctatttggtcaccgccgatcatggcaacgccgaggatatggtgaagaggaacaaatccggccagccacagcttgacaagaaaggcgaaatccagattcttacctcacacactcttcagccagtgccagttgccattggaggccctggcctacattctggggtgagattccgcaacgacgtgcagacccctggcctcgccaacgtcgccgccaccgtgatgaacctccacgggtttgaggcccctgctgactacgagccaaccctaattgaagtagttgacaaataa</cdnaseq>

Protein Sequence

<aaseq>MGSSDFSWTLPDHPKLPKGKPVAVVVLDGWGEADADQYNCIHVA ETPTMDSLKKGAPEKWKLVKAHGTAVGLPSDDDMGNSEVGHNALGAGRIFAQGAKLVD TALASGKIFEGEGFKYIKESFDQGTLHLIGLLSDGGVHSRLDQLQLLLNGASANGAKK IRVHILTDGRDVLDGTSVGFVETLENDLSQLRAKGIDACIASGGGRMYVTMDRYENDW DVVKRGWDAQVLGEAPHKFQNAVEAVKTLRSETKANDQYLPPFVIVDDSDKAVGPIVD GDAVVTFNFRADRMVMIAKALEYEDFDKFDRVRVPKIRYAGMLQYDGELKLPSHYLVS PPEIERTSGEYLVKNGIRTFACSETVKFGHVTFFWNGNRSGYFDETKEEYVEIPSDSG ITFNVKPKMKALEIAEKARDAILSGKFDQVRVNLPNGDMVGHTGDIEATVVACKAADE AVKMILDAIEQVGGIYLVTADHGNAEDMVKRNKSGQPQLDKKGEIQILTSHTLQPVPV AIGGPGLHSGVRFRNDVQTPGLANVAATVMNLHGFEAPADYEPTLIEVVDK</aaseq>

Gene Sequence

<dnaseqindica>4343..4507#4070..4225#3870..3965#3595..3787#2929..3353#2575..2778#2298..2448#1562..1689#919..1080#cggcttcatatcatccggcatccagagaaaaatatagcaacgaaaaaaaaggagaaaaaaaaaacagtctctcttccggtaatcttctcgatctcacctcgctttgaactctccgctcgattttttttctatgatttctccaatctggttaacttggattgttccctacccccagaaatctgttgtagtgtagatctggtaaatttgtttccctcacatttttgcgctctattttgccttttttattttttggcttgtttaaccaaatcggtgcctatgcgtgcgcgatagtctgattccaatgcagatgcatttttgtgcggtttagagatggagattaagattggagaatggtttgattttgttcgagtcgaacgattctggagaatgtgtgatgctaagccctatttgggaataccccttttgatctctatagatcgcttcgagtaggataggagatcagctgcagattaaccaactacttctgtaattgttactagcaatacaatacactgttacttagtgagatgagctcgcgaggagagaggtgagaaggcacggacgaggcggcggaggcgcgcggctgcgcgccgcacgcgttgcggcgtcgagtagacgagaggattggggggggggggggaattagggtttgggaagagaaagaaatccaacggctgtgattaacggtagtataatggcccatgaatagcccatgaagagcccataagaagagtacctagggttcgctcttgatagccaccttgttgagatgtgatggttagaacgggattgctgcgacattgttgttctttttttttttgtgtgtgtgtgtgtggcaggtatgtgttctgagatggttaatttcatgttctaactttgatttctttatatctgtgattttggtaggtttagttggtgatgggaagctcagatttctcgtggacattgcctgatcacccaaagctccctaaggggaagccggtggccgtggttgtactggatggatggggtgaggctgatgcggaccagtataactgcatccatgttgctgagacaccaacaatggattcgctcaagaaggtatattttcttagcttttagtatgtagttaaggccttggaggttagccaccatagatgtaatttgctgtgtattgtttttgaagaatctgtggtggttaggtgacaggtgaaacctgaagcacaaattctttgtttcctccaaccaattatcttcgccctacctttgctaggggcttctccttcatgtagttgtcttagtaaattgactctagtacattttgtgggtggtatggttggtatttttagacaaattgtcacagtgaagaaatactgtactcgttaagtatggtacctggatcactgtctttgcatgttccgtgcatactaacattccattatgagttgtaggcaatggattctgaccttgtttgcgacatatattagaacaagtttagtatgatattgttgaaacgctttatgatgattgttcttacccttttacttaacttcatggtttatcttgttttctatgtttcaagggtgctccagagaagtggaagcttgtaaaggctcatggaacagctgttggtctcccttctgatgatgacatgggtaacagtgaggttgggcataacgcacttggtgctggtcggatttttgctcaagggtacatgtttctcctggttctcttttttattagcacactgtcagttataatctgtggatggccaaaaagtattgcgtttgtttctaaaggtcttattacatcaggtttctgttgcttggcttatttgtgtgccagatttagtaaaatcaaatggcaaccattggttccttttggcatcttaagtgttagatttacacagatctctccaaatgatgtggattaccacatgagcatgaaagagatatcatcattactatctcatgttattatacaaatcatgcacttcctttagcagctactagtactaactaaaaagatatcccgtgtactgatttacaaactttagagatgaagggtagttcttttatgaacaactgtttgagttgtatgttatacttgacatgcagcgactttttgaaggcatgccaactactcgtggtgctgtgtacttcaagttattccaaattttctctttaaattactaaatccatgtggtgccttttagacattgccattatgccgtatatgaaatcattcttttaagaaagaagttagaagcctcagacttaagcctctaaatataccatgttctccattttcttttgtagggctaaacttgtggatactgctttggcctctggaaaaatttttgaaggagaagggtttaagtacattaaggagagttttgaccaaggcactcttcatcttattgggttgttgagcgacggaggtgtccactcacggcttgaccagttgcaggtataaaagtactcttttctatagtttgctatcatcttgtatagtatgaggcactaatgtttctttacaacatgttgatctgtccagtatctaattctttttgtcttttgtcattcctgtttatagttgctcctgaatggtgcaagtgcgaatggagcgaaaaaaatccgtgttcacattcttactgatggacgtgatgttttggatggcacaagcgttggttttgttgaaacgctagagaatgatctttctcaactgcgtgccaagggcattgatgcgtgcattgcatcaggtggtggaaggatgtatgttaccatggaccgatatgaggtatgaataccctccttcctctctgtcagtttggattgctcatatcttatctctcagctgcattctgtttttattgcaactctttctgacttgggataatatgtactaatggaagtattgaactatttgtttaatatctcaattttgcagaatgactgggatgttgttaaacgtggatgggatgctcaggtgcttggagaagcacctcacaagttccaaaacgctgttgaagctgtgaaaacactccggtcagagaccaaggctaatgatcagtatcttcccccatttgtgattgttgacgatagtgacaaggctgttgggcctatagtagatggtgatgcagttgtgaccttcaatttccgtgctgatcgcatggttatgattgctaaggctttagagtatgaagattttgataaatttgatcgtgttcgtgtcccaaagatccgatatgctggtatgcttcagtatgatggtgagctgaagcttccaagccactaccttgtttcaccaccagagattgagaggacatccggtgaatacttggtgaaaaatggcatccgcacctttgcttgcaggcaagtttttttttcaccattttctcaattggatactaaactgattgaatcaattgtggaatgcttttctcggggacatatggctgtttttattcagccaatcttgtatttcagtatatgaactattcagacagtatatgaagtaacataattggaaaataacttatagttgcactgtaatttctttctaactctaccaatttgtccaactttacttactgaattgactcatttgttccagtgaaactgtgaagttcggccatgtcacatttttctggaatggaaaccgctctggatacttcgatgaaacaaaggaagagtatgtggaaatccctagtgacagtggtatcacattcaatgttaaacccaagatgaaggcccttgagattgctgagaaagctagagatgctatccttagtggcaagtttgaccaggtaaaaaacagcacttgtgtgcgactttgataggtttgttaaattatttacccctaaaattcttaacattctgttcttacaggtccgcgttaacctcccaaatggtgatatggtgggtcacactggtgacattgaggccacagtggttgcttgcaaagctgctgatgaggctgtcaaggtgagaacgaagatgagaagatagtttcttctgtctttctatactgaatttgaatttgaaccactcaaatttgacgagaatggctgttccttcttttgtgatagatgattctggatgccattgagcaagtgggtggcatctatttggtcaccgccgatcatggcaacgccgaggatatggtgaagaggaacaaatccggccagccacagcttgacaagaaaggcgaaatccagattcttacctcacacactcttcagccagtaagtgcagagcaggatctaggcttggactatgctccctaatcccaatttaacctgctttgctgcatgcctgtgttgattttaatcttgctggttctatgtgtgaatttattataggtgccagttgccattggaggccctggcctacattctggggtgagattccgcaacgacgtgcagacccctggcctcgccaacgtcgccgccaccgtgatgaacctccacgggtttgaggcccctgctgactacgagccaaccctaattgaagtagttgacaaataaattaaatgtaaacagcggattttgtcgctgtgattttgctatgggtcagagaaatggtctctgcgatgttgaatactccgtttttatgagcagtctgctggaacctacgagggtttttataaaaacgaaactgatttatgatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0482700, RefSeq:Os05g0482700