Os05g0490200

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0490200| Description = Protein of unknown function DUF1692 domain containing protein| Version = NM_001062433.1 GI:115464596 GeneID:4339163| ...")
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Gene Name

Os05g0490200

Description

Protein of unknown function DUF1692 domain containing protein

Version

NM_001062433.1 GI:115464596 GeneID:4339163

Length

5903 bp

Definition

Oryza sativa Japonica Group Os05g0490200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24128265..24134167

Sequence Coding Region

24128476..24128617,24129451..24129524,24129688..24129771,24129852..24129932,24130654..24130734
,24130853..24130945,24131444..24131620,24131704..24131771,24131899..24131950
,24132052..24132105,24132188..24132277,24133209..24133275,24133568..24133659

Expression

GEO Profiles:Os05g0490200

Genome Context

<gbrowseImage1> name=NC_008398:24128265..24134167 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24128265..24134167 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggggttcctgcagaagctgaaggggctggacgcgtaccccaaggtgaacgaggacttctacaagcggacgctctccggcggcgtcgtcacggtcgtcgcctccgtcgtcatgctgctgctgttcgtctccgagacccggtcatatttttattcagcaacagagactaagctagtggttgacacatcaagaggggaaaggctacgagttaattttgacgtaacttttccgagtgttccctgcacccttctcagtgttgataccatggatattagtggagagcagcatcatgacattaggcatgatatagaaaagaggcgattagacgcacatggtaatgtcattgaggctagaaaagaaggcattggtggagcaaagatagagagtccattgcaaaaacatggaggaagactcagcaaaggtgaagaatactgtggcacgtgttatggtgctgaggagtcggatgaacaatgctgtaattcttgtgaagaagttagggaagcatataagaagaaaggatgggcccttacaaatcctgatctgattgaccagtgcaccagagaagattttgtggaaagagttaaaactcaacaaggtgaaggttgtaatgtacatggctttttagatgtcagcaaagttgcagggaacttacactttgctccaggcaaaggattttatgagtcaaatataaatgtgcctgagctgtcggcacttgagcatggtttcaacatcacacacaaaataaataaactgtcttttgggacagaattccctggtgttgttaatccacttgatggtgctcagtggacacaaccagcatcagatgggacataccaatacttcataaaagttgttcctacaatttacactgatctaagagggcgcaagattcattccaaccaattctcagtaacagagcattttagagatgggaatattcgccccaaaccccagcctggagtatttttcttctatgatttctcacccataaaggtaatatttacagaagaaaatagttccctgctccactatctgacgaacctatgtgctatagtgggaggggttttcaccgtctccggcatcattgactcgttcatatatcacgggcagaaggcactcaagaaaaaaatggagctaggcaagtacagatga</cdnaseq>

Protein Sequence

<aaseq>MEGFLQKLKGLDAYPKVNEDFYKRTLSGGVVTVVASVVMLLLFV SETRSYFYSATETKLVVDTSRGERLRVNFDVTFPSVPCTLLSVDTMDISGEQHHDIRH DIEKRRLDAHGNVIEARKEGIGGAKIESPLQKHGGRLSKGEEYCGTCYGAEESDEQCC NSCEEVREAYKKKGWALTNPDLIDQCTREDFVERVKTQQGEGCNVHGFLDVSKVAGNL HFAPGKGFYESNINVPELSALEHGFNITHKINKLSFGTEFPGVVNPLDGAQWTQPASD GTYQYFIKVVPTIYTDLRGRKIHSNQFSVTEHFRDGNIRPKPQPGVFFFYDFSPIKVI FTEENSSLLHYLTNLCAIVGGVFTVSGIIDSFIYHGQKALKKKMELGKYR</aaseq>

Gene Sequence

<dnaseqindica>212..353#1187..1260#1424..1507#1588..1668#2390..2470#2589..2681#3180..3356#3440..3507#3635..3686#3788..3841#3924..4013#4945..5011#5304..5395#acatctcctcctcctcgtaatcatcttctcttctctcttccccggcggcgacgcggcggcgccggtcaaaccactcctcgccggcgaggggagcgcggatcgggctcgggaggaggctaggggtttggctcgctcgctcgctttcggcgtgcagctgaggcggtggacttggcggctgtggcggaggtggggaggtggaggtggaggggagatggaggggttcctgcagaagctgaaggggctggacgcgtaccccaaggtgaacgaggacttctacaagcggacgctctccggcggcgtcgtcacggtcgtcgcctccgtcgtcatgctgctgctgttcgtctccgagacccgtaagtgtgtgtgcgcgaagcagccgccgccgcgcggatgttgtgtgctgttcgcgtactctcccatccgtggccgtaatggctcgatgtggtttggaattcgaggagttggttcttgccaacaagatcaaagtcggatttcgagttgtcgatggggatggggatttagagtaagatttgaattcaatgatgcggtgggcgtgttcctgctgctgctgcatgcttgaatgtttggaatatttccaggggcacctgaccgcgctcttggtaatttctagaagaaggtgcccttttaggtagacaggttttgcggtgtgtcagggtaacgaactaaagatgggcatgttgcgatgggcattgacgctaatggtgatgtatgctgcgcgcgatttttcttttctttttctttttccttttcgggtgtgagattcctgaaaagttcaggaatgcttttggctgagttcctgcgtctctgaggaagataaattagtttatttttttctgctattacttggatttatgtgctgctatcactgttggttcgtgaagggtaagtttttgtgttgttggctctgcatgttggatcatgcgtgcaaaattaggtcgtcacaaggattatgccgttttcaagttaccttttgagtaaagtctgttgttgcaaaggttctgttttatttggccagcatggccttacattactttggagtttggagaacaagaggttacaagttgtcgaatttttatgctctttttgtttggtgcaatttgttagtgtttatttttttaaaaaaattctggtagtgagaaggttctttcataaaatgtttttgcagggtcatatttttattcagcaacagagactaagctagtggttgacacatcaagaggggaaaggctacgagttaatgttagtatttatttgattgttaaactagattcatgtcatatgttgtacttctattgtttctagtataaaatgcatactcttttgtatgctattcacttacaatctgttgggaactaggtgtgaatatttcctgttaacttctaatgctaaaactgttttgcagtttgacgtaacttttccgagtgttccctgcacccttctcagtgttgataccatggatattagtggagagcagcatcatgacattgtacgcacttatgctatatcatcttctaattcttagtatgtgttgatttgtccatcttattattccattgtttgttgtagaggcatgatatagaaaagaggcgattagacgcacatggtaatgtcattgaggctagaaaagaaggcattggtggagcaaaggttggtgatcactgctttagttacactttgaggttgagctcattaataaactaagtgattccccgcgctttgctgcgggaattaccaaacaattctcaatatatatttttcgacaatcaagatagcagtaaaaaggaaaaaaataatgaaacatcagggtttatcggtacttatcatgaaacaaacaaatgatatccgcgctttaatgtgaaacatataacatattataaaaatgatagatagatttgttaaactattgtgcaaatgatgtgaggggtggtgattagatatgcttgcatgttgatttgtagaattaaataaattgcagatgatgttgtatgcttgcatgtcttaaatatgtaataattgctagtgggtgatgatgtgacattgttgcatgttgagctttagacttagtgagctataactttatagaaagtatagatttaaaatatcgaactagagtcgtctgtacaaattattcttggtgacctagtatatttccctacgatgtacagcattgtagttgttggaaaacaagtggaaatttaagtacttaaatatttttattgtcaataccttattttttacatgaggacataacgtgagcatagcatgtataatattacagattagaatataaccgtttgtggactgtccatatgctgaaaacatactccagtatccacttaaaacatttccttcttgctgccttgtatagatagagagtccattgcaaaaacatggaggaagactcagcaaaggtgaagaatactgtggcacgtgttatggtgctgaggaggtatgcacaatcttttctaatgggaatgtattttgtttatacctcttattatttcagctttctgaacttaccttgttctttgttacattctaactccggatggctttctggacttcagtcggatgaacaatgctgtaattcttgtgaagaagttagggaagcatataagaagaaaggatgggcccttacaaatcctgatctgattgaccaggtatattagttattttggcatggtttacctagatatatccattgtttagatttccgttgagttctcttgggcttagtttaagtttggaaaatatatgtatggcaaataatgttgaagattgcaagataattaatatagtctatatagaggtagtatctcttaagaagccactattactggaagtccctgagaaatgattttattcctcagtcccatatctgccttgtttctctccactaaccaattagaacaacaaaaatggcctactcctgacgtagtggcataccgtatagttagatgcctgttgcgcgtatactctagcctttctatactagtatacttgtgtctagtgacaagctagtgtggcacacctctctttcatgcttttgctttgcaaggcagggctcatttatgagtgaaaagagtgaggcgacgtcatttctcctactatttactggaacttccgccctactgatttgttttccttgggcatgacagtgcaccagagaagattttgtggaaagagttaaaactcaacaaggtgaaggttgtaatgtacatggctttttagatgtcagcaaagttgcagggaacttacactttgctccaggcaaaggattttatgagtcaaatataaatgtgcctgagctgtcggcacttgagcatggtttcaacgtaagtaggtccaataaatgttccttttccttaaaagtgtttttattcagtgtttctgatatgtttgtgtataattttaccagatcacacacaaaataaataaactgtcttttgggacagaattccctggtgttgttaatccacttgatgggtacgtccatagctctagctcattgagcatataattatagccttgcacttattctcctagttatatatttcttttttcaatttttatctttgtaccctcatgtcctaacaaatttcatgaacgtcagtgctcagtggacacaaccagcatcagatgggacataccaatacttcataaaagtgagctcttgttatccatgtttacgtgcttacatttgtatcagttgtttctgctacaaaccatcatttgaaaagaaacttactgggttttgcttaaccaggttgttcctacaatttacactgatctaagagggcgcaagattcattccaaccaagttagtgaagtttattgaatcatgtttatactttatattttttttccaagcctagtgatcttattgttacttgcattcacagttctcagtaacagagcattttagagatgggaatattcgccccaaaccccagcctggagtatttttcttctatgatttctcacccataaaggtagtaacaatggagagaaattcgtatgtagtcatgttcatttttctctttttatgattctatcttagcttgctctactcatcttctcaacctgtggatatgtgttgccaagctcatctgttgaatggctggctgtgttggtgtgaccattcttgctgcacatgcagaatgctccaaattcaccatctgttattattcagtactatttaattactttggacacaagagaagtctacaatacctttgtttcacctttatctattctgacactgcaggaccaaactggaatttgtaggctttaggtcatggagagtttctaaagttagttattatactagtcagtagctaaaagaatcagttcattgatgagatatatctgttaggagtatcctagcataaaatttggtattatccttttattatttttattatttgctgaatggctccaaaaatgtctgcatatgcatcgtaacactttgaatacaaaattgacagtgcatgtctatactcattcaaaagcctctagtggtggtggcagggaatttgccaccccactattgctttttgcagtttttacaaattgtcccctgatatttttctaatattgtggaatagttcaatatttggttcaaacaagtgaatagcagataatgaaataaacaaacaattgatactaagatatttgataaaatatatatttttcttacatattatgatattgtttttcttctgcccatagcaaagcttgggcattttgctagtactcaaaagtcaaaacttatacatgtggataacatacagtttcgtatcaatataacgattaactaattctcatattctcttatcagattgaaaggtactccttttaagttttaactctttagttctgtgacccactaaaatcttagttctccaccttatgtttttgcaggtaatatttacagaagaaaatagttccctgctccactatctgacgaacctatgtgctatagtgggaggtattagcattacctctattttattctcaaactgattaatcttttttattctattgtagtgaatgagtgttatctcttcagtcttcactaacaaattcttataattcttatacatttcaccgaaaactccaatgcttatttgacaaagtttataattagtttgttactatttgcctaagtgatgaaccgttgaaggaattggctctgtttatctatgtgcctgtgtataagtaatgtagcaaacctagtatggatgcaagtcactaaacttttgtctgccttgtatcctcaggggttttcaccgtctccggcatcattgactcgttcatatatcacgggcagaaggcactcaagaaaaaaatggagctaggcaagtacagatgatttacctgaaacatggactggccctcatgttccccaagttcccaagttccgtggcttgtaaaggatccattgcttaagacctgaagacgttgctttgctggaaggttttgctaaggccatcagaattgacgatattgcacattagttgatcaaaaactcgtttacatgtaaaaaaagacaatatcatagcgttgggcctgggggagtgctttgatgtctcagtgagactctttttgagtggccaaaactggcgaaatgagatggatagattaaatcaattttaccactgcgtgtgccatctaacactgtttgacgttttctgtatttcttttcaggaagaactagaacttacattttttttgttctttttttttgcttcatctgagtgcattagtagagatataacccatttcttgtaacttcagggtgttcaaagagacaatttgatcattttcgtgtcacgtccttctgccatcgtttgacgcttgcaatttattcaggaagaact</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0490200, RefSeq:Os05g0490200