Os05g0490600

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0490600| Description = OSMYB5| Version = NM_001062437.1 GI:115464604 GeneID:4339167| Length = 3988 bp| Definition = Oryza sativa Japonica ...")
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Gene Name

Os05g0490600

Description

OSMYB5

Version

NM_001062437.1 GI:115464604 GeneID:4339167

Length

3988 bp

Definition

Oryza sativa Japonica Group Os05g0490600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24157999..24161986

Sequence Coding Region

24158192..24158199,24158290..24158457,24158653..24158925,24159026..24159389,24160112..24160483

Expression

GEO Profiles:Os05g0490600

Genome Context

<gbrowseImage1> name=NC_008398:24157999..24161986 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24157999..24161986 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacgagagcgacagcgatcctgattctgacaggacacactggtatatgagcaatagcgatgacgagtcatttgttgataaagataaagattgcagaaggagcaccgtagccctgctgttgaagaaaggtccatggacatcttgggaggactccatcttagagaagtacatcaagaagcatggtgaaaggaactggaagcttgtgcagaagaacactggcctcttgaggtgtggcaagagttgccgtcttcggtggatgaaccatctgaggcctaacctaaagaagggggctttcagcaaggaagaagagaataaaattattaatcttcatcgcaaaatggggaataagtggtctcggatggctgctgatttgccagggcgtactgataatgaaataaagaactactggaacactcgaataaagaaatgcaagaacaatcgttcgcctttgtatcctgctaatgtatgcaacgatgctttgaatgaagatcaacatgagtctgctgaccccaacgttagggagaagctgaccaataatcatctagaagatactactagtatgtattctgcaccccagttttcagatgcttccatcagtaatatacttgataggagacttgcatcaaaagattatgactccatagaagatcaaagaaaccaaatagaagttgtagcaaaatatgagattccacttcctgtgttgaaaacaacgaacaatgacatatttccatcagcctctatctttgccaaccatggtatttcaaatggcaatctctctgctttgtccacaactgatgctttgcagatggagctccctttaatccaatttgatccaaacaaccagttcgtttactcaagggcttatgcgatgcacctaacaaactttgctttattaaatgatcaatcagaagaattactaaatgatactgatgtattgaactatgtggtgatgaaagaagagctttctggagggagtttgagtcctactattaatatgccatgtgaagcacataactccatggctgcctctaatgagctggtagtgccacaatatgaaggagatgctccacctcttcaagatgatttcacatcatatttctatttgaatgatactaatctatccatattcgaagacacaaatgaattgtttttggaaaacaagttggatactaaaggtaactga</cdnaseq>

Protein Sequence

<aaseq>MHESDSDPDSDRTHWYMSNSDDESFVDKDKDCRRSTVALLLKKG PWTSWEDSILEKYIKKHGERNWKLVQKNTGLLRCGKSCRLRWMNHLRPNLKKGAFSKE EENKIINLHRKMGNKWSRMAADLPGRTDNEIKNYWNTRIKKCKNNRSPLYPANVCNDA LNEDQHESADPNVREKLTNNHLEDTTSMYSAPQFSDASISNILDRRLASKDYDSIEDQ RNQIEVVAKYEIPLPVLKTTNNDIFPSASIFANHGISNGNLSALSTTDALQMELPLIQ FDPNNQFVYSRAYAMHLTNFALLNDQSEELLNDTDVLNYVVMKEELSGGSLSPTINMP CEAHNSMAASNELVVPQYEGDAPPLQDDFTSYFYLNDTNLSIFEDTNELFLENKLDTK GN</aaseq>

Gene Sequence

<dnaseqindica>3788..3795#3530..3697#3062..3334#2598..2961#1504..1875#gttgccgcacatatactcgtgctcgcgctcacgccgccgcccccgaaactccccgctccgccattgccgggggaggcgatctcccatctccatctcccatctcgcctcagcgaactccccttcacatcgcgtctcttccgtcgcagagagtggcggccggtgaccatttccggtgggagggcggaggttttgtcccggctccggcgacactccacactccgacagcccaccgctccgtcaccctgcatttttggtcaggtaaaaaatggaccggtggcgttgcttattcttttcttggggggtcatatttagtggtttgatcggtgaattgttgggaatagtcctaagagattttagtggatctgtttcttgcacgatatgttgtgtaatctactaatctgtgctcgtttcaatctacttcactgaaattaccaatctcagttgagattggaactgtgagtgcatctcattatttttttatagagtaaaatgcatggaggatcatctaacttgtttaggtgtatcatataggtcacttttctttcaaaatgcacatgtaggtcactaatgtgagttaagtgagttattgacacaattaactataaatatgagcatagccacatatgattgaaaatttgcttctgcacataaataaccccatacttaattaatttaatcgaatcatttcacttatggctgttttgacgaatagtctccataatgcagaaaaaccctctatattgtgattttgtttaagtcctaccgtacatcattagccaatcccggaattagcgcacaacgtgttagcaacaagcaatcttcatggctacgatacctgtataaatagtacatatagcttccaggaattgatcgatgtgagttgatatatattgtgaattccgtgtattggcaaggggtagtgttaggagaagggaaataaaacagggtttttttttttgcacatatctagaagcaaattttcaatcctagatggcatgtcatgtgtaaaaaagtgtgatcatttggatagttaaatgagctaatgactcacttaactcatacttcctccgtttcacaatgtaaatcattctagcattttccacatttatattgatgttaatgaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtattagtgacttaatgtgcattttgaaagtagagtgacctacacgacacatctgaacaagttatatgaccctccatgcattttactcttttttataagtaggcgtcactccatttcttgattttagaaattaagtgttgtatccgtttttttttataccttggcgatttttgtaaaagttttatatgggtataaatttgttaatctctgctagccgtggccactgacctaacattttcatgtacacatatttctgttttatttttgatagttcaactcgtgtttgtgacaggatgcacgagagcgacagcgatcctgattctgacaggacacactggtatatgagcaatagcgatgacgagtcatttgttgataaagataaagattgcagaaggagcaccgtagccctgctgttgaagaaaggtccatggacatcttgggaggactccatcttagagaagtacatcaagaagcatggtgaaaggaactggaagcttgtgcagaagaacactggcctcttgaggtgtggcaagagttgccgtcttcggtggatgaaccatctgaggcctaacctaaagaagggggctttcagcaaggaagaagagaataaaattattaatcttcatcgcaaaatggggaataagtggtctcggatggctgctgatgtaagtttaccttgtagttcatttttttttcttttgctctcaaaatatatatctcttgaaaccatttataaaagtgttgttctttaatagtttttgcatcacaagtatgtttggtgacctttacatggaggggaggtacggggatattaatatttgtagttcatccattggtaaagttatttaatttaaagttgggtagtttttttttccagttgcattacaaatatgttttgcaacctttacatggaggtatgggtattattaatatttgtagttcaaatgttggtgaagttattttcttcaactaaacaaatgttatccatttcatttatttcaattaatatttggtagtttttgcattacaagtttatcctaaaatatgattatcatcacaaatcagatcaaccctaatcagcagatataaatattgtcaaagtcccatccttgaaattatcttagaaatgtagcctatttttgcttgtatggcttaggggttgctatttaaagtaaactgctagtatcttttcattgcacttgcaatcatcggcctggtttagttctactgaaaataaggagccgtgggacaagctaaaagttaaagtgaaacttggggtctagctttatgcatataactatcttagttgttgttttagaacattgttactgttatatgcattgttctatctattatcattgttattaacttgaccacatgttctcagttgccagggcgtactgataatgaaataaagaactactggaacactcgaataaagaaatgcaagaacaatcgttcgcctttgtatcctgctaatgtatgcaacgatgctttgaatgaagatcaacatgagtctgctgaccccaacgttagggagaagctgaccaataatcatctagaagatactactagtatgtattctgcaccccagttttcagatgcttccatcagtaatatacttgataggagacttgcatcaaaagattatgactccatagaagatcaaagaaaccaaatagaagttgtagcaaaatatgagattccacttcctgtgttgaaaacaacgaacaatgacatatttccatcaggtgagctatcccctaaaccactctacacataagcttttggtattgacttcgtatcactttgtgactaactctaatgataagaccatgccatcttttgcagcctctatctttgccaaccatggtatttcaaatggcaatctctctgctttgtccacaactgatgctttgcagatggagctccctttaatccaatttgatccaaacaaccagttcgtttactcaagggcttatgcgatgcacctaacaaactttgctttattaaatgatcaatcagaagaattactaaatgatactgatgtattgaactatgtggtgatgaaagaagagctttctggagggagtttgagtcctactattaatatgccatgtgaaggtatggcagattcttcagaactccctttatgcaagggatatcgggaacaagatcttgatttttacacacacaatagtccagtatcgtcggaagagcttcataactttgaactttctttcggttcgtatagtttacttatttcatcttttacttatatagtaatttagctgttgatttgttgatatctttttgaagcacataactccatggctgcctctaatgagctggtagtgccacaatatgaaggagatgctccacctcttcaagatgatttcacatcatatttctatttgaatgatactaatctatccatattcgaagacacaaatgaattgtttttggaaaacaagttggatactaaaggtgaacttgtgatggcatgttatgtttcatagaacttgcttatggttgaaatcatcctttttctaaaaatatttgttcttgcaattccaggtaactgacgccagattgtcatgagttgctgctctcttggataaactcatcatgaaaccaagaattttattccatgaagctcgtgaacgagccagtcgttgctatctctcttattaggatttccagtttggatattgccgtactcctttacttttcttcatgtcgaaattaccatgcgtgctatgttgaatttcatctgct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0490600, RefSeq:Os05g0490600