Os05g0491900

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0491900| Description = Similar to Calcium-dependent protein kinase (Fragment)| Version = NM_001062447.1 GI:115464624 GeneID:4339177| Length...")
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Gene Name

Os05g0491900

Description

Similar to Calcium-dependent protein kinase (Fragment)

Version

NM_001062447.1 GI:115464624 GeneID:4339177

Length

2305 bp

Definition

Oryza sativa Japonica Group Os05g0491900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24223045..24225349

Sequence Coding Region

24223045..24223137,24223246..24223345,24223470..24223597,24223700..24223867,24223976..24224091
,24224123..24224246,24224435..24225349

Expression

GEO Profiles:Os05g0491900

Genome Context

<gbrowseImage1> name=NC_008398:24223045..24225349 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24223045..24225349 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaactgctgcccgccggggtcatcctccgagcccgacccgccgccggcgtcctccggctcctcccgccccgccggcagcgccggcgccgcggcctcgccggcgacaatatccccctccgccgcgccggcgcccgccaagccgcccgcgcccatcggccccgtcctcgggcgccccatggaggacgtcaagtcgatctacaccgtgggcaaggagctcgggcgcgggcagttcggcgtcacgtcgctgtgcacccacaaggcgacggggcagcggttcgcgtgcaagacgatcagcaagcggaagctgtcgaccaaggaggacgtcgaggacgtccgccgcgaggtgcagatcatgtaccacctcgccggccagcccggggtggtggagctcaagggcgcgtacgaggacaagcacgccgtccacctcgtcatggagctctgtgccggcggcgagctgttcgaccggatcatcgccaagggccactacaccgagcacgccgcctcctcgctcctccgcaccatcgtcgagatcatccacacctgccactccatgggcgtcatccaccgcgacctcaagcccgagaacttcctcctcctcagcaaggacgagcacgcccctctcaaggccaccgacttcggcctctccgtcttcttcaaagaaggtctccatcaattcctccattgctgctctctccttgagctcatcatcatcgtcgtcatcaatggcgttccaattgcaggtgaggtgttcagggacatcgtcgggagcgcctactacatcgcgccggaggtgctcaagcggagctacggcccggaggcggacatctggagcatcggcgtcatgctctacatccttctctgcggagttcctcccttctgggcaggcaagctgctgctgttcatcgccatggaccttgtcaggcggatgctccattctgaccccaagcagaggatttctgcatatgacgtgctcagtgagtacccttcactttacgctgaacatcccaaatctttcaacaccctgaatttttcagatcatccatggataaaggaagacggcgaggcgcccgatacgccgctcgacaatgctgttcttggcaggctcaagcagttcagagctatgaaccagttcaagaaggctgctctaagggttatcgccggatgcttgtcggaggaggagatcagggggctcaaggagatgttcaagagcatggattccgacaacagcggcacgatcaccgtcgacgagctgaggaaagggctggccaagaagggtaccaagctcaccgaagctgaagttcagcagctaatggaagctgctgatgcagacggcaacgggacaatcgattacgaggagttcatcactgcgacgatgcacatgaacaggatggacagggaggagcacctctacaccgcgttccagtacttcgacaaggacaacagcgggtacatcacgatcgaagagctcgagcaagcgctgagagagaaagggttgatggacggcagggagatcaaggacatcatatccgaagtcgacgccgacaacgacgggaggatcaactacacggagttcgtggccatgatgaggaaaggcgacccggaggcgaacccgaagaagcggcgcgacgtcgtgctgtag</cdnaseq>

Protein Sequence

<aaseq>MGNCCPPGSSSEPDPPPASSGSSRPAGSAGAAASPATISPSAAP APAKPPAPIGPVLGRPMEDVKSIYTVGKELGRGQFGVTSLCTHKATGQRFACKTISKR KLSTKEDVEDVRREVQIMYHLAGQPGVVELKGAYEDKHAVHLVMELCAGGELFDRIIA KGHYTEHAASSLLRTIVEIIHTCHSMGVIHRDLKPENFLLLSKDEHAPLKATDFGLSV FFKEGLHQFLHCCSLLELIIIVVINGVPIAGEVFRDIVGSAYYIAPEVLKRSYGPEAD IWSIGVMLYILLCGVPPFWAGKLLLFIAMDLVRRMLHSDPKQRISAYDVLSEYPSLYA EHPKSFNTLNFSDHPWIKEDGEAPDTPLDNAVLGRLKQFRAMNQFKKAALRVIAGCLS EEEIRGLKEMFKSMDSDNSGTITVDELRKGLAKKGTKLTEAEVQQLMEAADADGNGTI DYEEFITATMHMNRMDREEHLYTAFQYFDKDNSGYITIEELEQALREKGLMDGREIKD IISEVDADNDGRINYTEFVAMMRKGDPEANPKKRRDVVL</aaseq>

Gene Sequence

<dnaseqindica>2213..2305#2005..2104#1753..1880#1483..1650#1259..1374#1104..1227#1..915#atgggcaactgctgcccgccggggtcatcctccgagcccgacccgccgccggcgtcctccggctcctcccgccccgccggcagcgccggcgccgcggcctcgccggcgacaatatccccctccgccgcgccggcgcccgccaagccgcccgcgcccatcggccccgtcctcgggcgccccatggaggacgtcaagtcgatctacaccgtgggcaaggagctcgggcgcgggcagttcggcgtcacgtcgctgtgcacccacaaggcgacggggcagcggttcgcgtgcaagacgatcagcaagcggaagctgtcgaccaaggaggacgtcgaggacgtccgccgcgaggtgcagatcatgtaccacctcgccggccagcccggggtggtggagctcaagggcgcgtacgaggacaagcacgccgtccacctcgtcatggagctctgtgccggcggcgagctgttcgaccggatcatcgccaagggccactacaccgagcacgccgcctcctcgctcctccgcaccatcgtcgagatcatccacacctgccactccatgggcgtcatccaccgcgacctcaagcccgagaacttcctcctcctcagcaaggacgagcacgcccctctcaaggccaccgacttcggcctctccgtcttcttcaaagaaggtctccatcaattcctccattgctgctctctccttgagctcatcatcatcgtcgtcatcaatggcgttccaattgcaggtgaggtgttcagggacatcgtcgggagcgcctactacatcgcgccggaggtgctcaagcggagctacggcccggaggcggacatctggagcatcggcgtcatgctctacatccttctctgcggagttcctcccttctgggcaggcaagctgctgctgttcatcgccatggttttttaagctaaagcagaaagaatggttcatgattctgcttgcgttaattttttttctgaacaatttaatgacgagatcaagatttgggcgtggcagaatcggagcacggcatcttcaactccatcttgagagggcatgtcgacttcagcagcgagccatggtcgcgcatctcgcatggcgccaaggaccttgtcaggcggatgctccattctgaccccaagcagaggatttctgcatatgacgtgctcagtgagtacccttcactttacgctgaacatcccaaatctttcaacaccctgaatttttcaggtgaatgatgctgtttttgttttctgtccagatcatccatggataaaggaagacggcgaggcgcccgatacgccgctcgacaatgctgttcttggcaggctcaagcagttcagagctatgaaccagttcaagaaggctgctctaagggtgagtagtgttcactgctcattgagtctgaaattaggtggtgaaagtgagagagagaaaaattcatgatgaacaataattcgctttgttaccttgaatcttttgcaggttatcgccggatgcttgtcggaggaggagatcagggggctcaaggagatgttcaagagcatggattccgacaacagcggcacgatcaccgtcgacgagctgaggaaagggctggccaagaagggtaccaagctcaccgaagctgaagttcagcagctaatggaagctgtaaggatagccacgcttaccagaatcatatggaattgtacttcacattcagaaaactttcagacttacaaaatgtttgtggatttggggggaaaaaaacaggctgatgcagacggcaacgggacaatcgattacgaggagttcatcactgcgacgatgcacatgaacaggatggacagggaggagcacctctacaccgcgttccagtacttcgacaaggacaacagcgggtgcattttctgaaaattctgttcagctgcaatgccatttcagtttgcagtcagcagtagaacagtatcagtatgcggttgcaaacattcagagctgaaaaccaacgcacatttctgctgacaggtacatcacgatcgaagagctcgagcaagcgctgagagagaaagggttgatggacggcagggagatcaaggacatcatatccgaagtcgacgccgacaacgtaagccgcagacatttcctacactgctcatccctgaactgaacactgaattgctgaacatgactgaatttctgaacatcactgaattgggtgagatcgttcgtgcaggacgggaggatcaactacacggagttcgtggccatgatgaggaaaggcgacccggaggcgaacccgaagaagcggcgcgacgtcgtgctgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0491900, RefSeq:Os05g0491900