Os05g0493500

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0493500| Description = Similar to B-type cyclin (Fragment)| Version = NM_001062454.1 GI:115464638 GeneID:4339185| Length = 2472 bp| Defini...")
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Gene Name

Os05g0493500

Description

Similar to B-type cyclin (Fragment)

Version

NM_001062454.1 GI:115464638 GeneID:4339185

Length

2472 bp

Definition

Oryza sativa Japonica Group Os05g0493500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24288089..24290560

Sequence Coding Region

24288089..24288140,24288534..24288657,24288753..24288852,24288948..24289175,24289266..24289391
,24289478..24289726,24289840..24289998,24290101..24290279,24290428..24290560

Expression

GEO Profiles:Os05g0493500

Genome Context

<gbrowseImage1> name=NC_008398:24288089..24290560 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24288089..24290560 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgaggcaccagcgcgcggctgccgctccgcagccggcgaacagaggtgctgcagtcgcagcggggaagcagaaggccgccgccaccgccgccgccggccgacctggtgcgagaaaccggcaagccctcggcgatatcggcaacgtcctgaacgcccatgtggtcgacggcaagatccagctgccggaggggatcaatcgcccaatcaccaggagcttcggcgcccagcttctaaagaaagctcaggagaacgccgttgcggcgaacaagattgtcgtgcagaatccggccaggaaggagccagctccgaagccggcaaagaaggtcgtaccccgtccggagaacgccgccaaggccagcaccggcgccggcgtcaacgagaacaagaagccgtcggagtcggagggcgccggcagcagcagcggcggttcagccctcaagtactccaggaagaaggtcgtgaacacgcttacatctgtgcttactgctcgttccaagcacgcgtgtggcattactgagaagccaaaagaagtcgtcgaggacatcgacaagctcgacggcgacaaccagctcgccgtggtggagtacatcgaggacatctacaacttctacaggacagcccagctggagcgccggccgacagactacatgagcagccaggtcgaggtgaaccccaagatgagggccatcctggcagactggatcatcgatgtgcactacaaattcgagctgatgccggagaccctctacctcaccatgtacgtcatcgaccggtacctctcgctgcagcccgtgctgcgcagggagctgcagctcgtcggcgtcgcggccatgctcatcgcctccaagtacgaggagatgtgggcgccggaggttcaggacctcatccacgtctgtgacaacgcctactcgcggcagcatatcctcgccatggagaagaacatcttgaacaggctgcagtggaacatcaccgttcccacaccttacgtcttcttgctccggttcatcaaggccgccggaggcgacaaggagctggagaacatggtgttcttcttctctgagatggcgctgaaggagtacggcatggcgtcgctgtgcccgtcgctggtggccgcgtcggcggtgtacgcggctcaatgtacgctgaagaggagtcccctctggacgagcacgctcaagcaccacaccggtttcaccgaatcacagctcagggagtgtgcgaaggtccttgtcaacgctcatgctgccgctcctgagagcaagctgaagacggcatacaggaagtacgcatccgagcagcttgggcgtgtctctctgcgccctccggcagtttgcctagcctag</cdnaseq>

Protein Sequence

<aaseq>MATRHQRAAAAPQPANRGAAVAAGKQKAAATAAAGRPGARNRQA LGDIGNVLNAHVVDGKIQLPEGINRPITRSFGAQLLKKAQENAVAANKIVVQNPARKE PAPKPAKKVVPRPENAAKASTGAGVNENKKPSESEGAGSSSGGSALKYSRKKVVNTLT SVLTARSKHACGITEKPKEVVEDIDKLDGDNQLAVVEYIEDIYNFYRTAQLERRPTDY MSSQVEVNPKMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPVLRRELQLVG VAAMLIASKYEEMWAPEVQDLIHVCDNAYSRQHILAMEKNILNRLQWNITVPTPYVFL LRFIKAAGGDKELENMVFFFSEMALKEYGMASLCPSLVAASAVYAAQCTLKRSPLWTS TLKHHTGFTESQLRECAKVLVNAHAAAPESKLKTAYRKYASEQLGRVSLRPPAVCLA</aaseq>

Gene Sequence

<dnaseqindica>1..52#446..569#665..764#860..1087#1178..1303#1390..1638#1752..1910#2013..2191#2340..2472#atggcgacgaggcaccagcgcgcggctgccgctccgcagccggcgaacagaggtgagcggcggtggctttgttctgtgttcttgatttgggttctttggggggacttgcctgaacttggggttctttggggttccaagctacggatttttctgtttgatgttccgaatctgtacgattcaagcggaaaattttgagttcttggtagtcgagtcttgcttggtgagagttccaggtctgttcgaatcctttttcaagaacggatttatgttgcgagggccaactgattccagtttccatcctttcttgcccgattcatgcaccaagaacggatttttgatgctgcccttcctgtgtttgattaggttttcttgatctgcttgtttcgatttatccccgtgtaaacgcaacccctgttgctaatcttcttctccggcgaatgggcaggtgctgcagtcgcagcggggaagcagaaggccgccgccaccgccgccgccggccgacctggtgcgagaaaccggcaagccctcggcgatatcggcaacgtcctgaacgcccatgtggtcgacgggtaaggagcagcacgacatcatcgtcgccaaccttccccgattcgttcttcctctcgtttccttctctgaaaacctcgtgttcttcttgcaacagcaagatccagctgccggaggggatcaatcgcccaatcaccaggagcttcggcgcccagcttctaaagaaagctcaggagaacgccgttgcggcgaacaaggtacggagtgagacacaccccccttctgtttctcgtgttcttcttgcgaattcagagcggttgatttgatccctgatttttgattttggtcgcagattgtcgtgcagaatccggccaggaaggagccagctccgaagccggcaaagaaggtcgtaccccgtccggagaacgccgccaaggccagcaccggcgccggcgtcaacgagaacaagaagccgtcggagtcggagggcgccggcagcagcagcggcggttcagccctcaagtactccaggaagaaggtcgtgaacacgcttacatctgtgcttactgctcgttccaaggtgagtgatcgatcgaacacctgtgcttgcctgcttatttctgcataattgcactgtagctgaatctgaattcgatgttgttaatggcagcacgcgtgtggcattactgagaagccaaaagaagtcgtcgaggacatcgacaagctcgacggcgacaaccagctcgccgtggtggagtacatcgaggacatctacaacttctacaggacagcccaggtaaacctcagattcttccatcttcgtttcagtgaagctttcctcttcagatttgttcagaaactgacagtgttgttcttgcacagctggagcgccggccgacagactacatgagcagccaggtcgaggtgaaccccaagatgagggccatcctggcagactggatcatcgatgtgcactacaaattcgagctgatgccggagaccctctacctcaccatgtacgtcatcgaccggtacctctcgctgcagcccgtgctgcgcagggagctgcagctcgtcggcgtcgcggccatgctcatcgcctccaagtacgaggagatgtgggcgccggaggtaacgcagattcgattgattcaacaagacgaacaagaatcccaatctctgcttcacacttgtgatgtaactgaacaaaactctgcttcgctgcggtgaacggattttttcaggttcaggacctcatccacgtctgtgacaacgcctactcgcggcagcatatcctcgccatggagaagaacatcttgaacaggctgcagtggaacatcaccgttcccacaccttacgtcttcttgctccggttcatcaaggccgccggaggcgacaaggaggtaaaaaaaacaagaagaagaaacaaagaacttgatttcatttctggtgtgccatggaaattgtaactgtattctgatcagagacattgtgtcttttttcagctggagaacatggtgttcttcttctctgagatggcgctgaaggagtacggcatggcgtcgctgtgcccgtcgctggtggccgcgtcggcggtgtacgcggctcaatgtacgctgaagaggagtcccctctggacgagcacgctcaagcaccacaccggtttcaccgaatcacagctcaggtattttttcaactttctgaatttccattttccctgaaacctgaactttctgaacttccgtttttcctgaacctgaagtttctgaacttttcaatgatctgtaaactaacattagttctgattgttgggatgaattgattgattgcagggagtgtgcgaaggtccttgtcaacgctcatgctgccgctcctgagagcaagctgaagacggcatacaggaagtacgcatccgagcagcttgggcgtgtctctctgcgccctccggcagtttgcctagcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0493500, RefSeq:Os05g0493500