Os05g0495100

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0495100| Description = Conserved hypothetical protein| Version = NM_001062463.1 GI:115464656 GeneID:4339195| Length = 4042 bp| Definition ...")
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Gene Name

Os05g0495100

Description

Conserved hypothetical protein

Version

NM_001062463.1 GI:115464656 GeneID:4339195

Length

4042 bp

Definition

Oryza sativa Japonica Group Os05g0495100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24360048..24364089

Sequence Coding Region

24360240..24360331,24360850..24360949,24361565..24361724,24362468..24362915,24363369..24363444
,24363553..24363599,24363694..24363877

Expression

GEO Profiles:Os05g0495100

Genome Context

<gbrowseImage1> name=NC_008398:24360048..24364089 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24360048..24364089 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcagaggaaggcgttgttccgggcgaagctccgggagcgcgaggccaaggagaagcaggagaggcgcatcgacccctccctcgtcaggtacaatgaatttgatcagcccatctgcagaatctgcaatgttactctgaaatctgaagcactttggcctgcacatcaagtttcacgaaaacatcatgaggcaaaagccgctgcagctgcatctgctaaagctccatcaggtgcagggtctcgtggcaataaggccaatcatgaacaacctgcagagtctcagaaaccaaaatcttccacattgcctgccaacttttttgaaaaccagggaatgaagaggcatagtgatggcgctggttctgaaggaaggtctgtgcgtcgggaggtagctgatgttcagcaaaaaaccaaagaagcaagcaaaactaagccatctgtcaattttgagaaaataccaaagaaagaaagtcaagccaataccaatgtcaaaggtgttcttccagggaacttttttgactataatgatgaagatgaagatccagctcctactgaggcgaatagtgcacctggaaatcctccaatttcaaatcgcatgcaggtgaaaggtgtacctgatggcttctttgatggcaacaaaaacagcaatggcatgcaacccagtgaaccaagtcaatcgtctaaagccgtaaagagttcagaaacttctgaagtaaaaggatcgctaccagaaggtttctttgataacaaagatgcagatctccgtgctcgtggtatccaacctccgaaaatcgatatcaatgatgcttacaaagaatttgagaaggaaattcaggaggacttgcaggaagttgatgatcgccttgaagaagaggagattgatgctgctgctgagagagaagagtacttgacattagagcaagaggagtataggcagcgggtggatatgctgaagaaacagcttaccgagtcaaaagccgcccgtaccactaaagcaaacagcaaacctgttggtatggacatgttgtcaagcagcgactcatctagtgacgaggaagatgacagcacggattttgctgttgattggagagcacaacatttgaaatga</cdnaseq>

Protein Sequence

<aaseq>MDQRKALFRAKLREREAKEKQERRIDPSLVRYNEFDQPICRICN VTLKSEALWPAHQVSRKHHEAKAAAAASAKAPSGAGSRGNKANHEQPAESQKPKSSTL PANFFENQGMKRHSDGAGSEGRSVRREVADVQQKTKEASKTKPSVNFEKIPKKESQAN TNVKGVLPGNFFDYNDEDEDPAPTEANSAPGNPPISNRMQVKGVPDGFFDGNKNSNGM QPSEPSQSSKAVKSSETSEVKGSLPEGFFDNKDADLRARGIQPPKIDINDAYKEFEKE IQEDLQEVDDRLEEEEIDAAAEREEYLTLEQEEYRQRVDMLKKQLTESKAARTTKANS KPVGMDMLSSSDSSSDEEDDSTDFAVDWRAQHLK</aaseq>

Gene Sequence

<dnaseqindica>193..284#803..902#1518..1677#2421..2868#3322..3397#3506..3552#3647..3830#atcttcgcggccgccggagagcagccagcagcggggtgcgggcgggcgcgggcgcgacgcgcgtggcgcgggtggagctcggaagcaggcgcagcctccacgggcgcaggcggggttgccgggacgcgcctgggcgggcgggcgggctcgaggttgtggtggggcgtgtggcaggatcctcctcgcgccgccatggatcagaggaaggcgttgttccgggcgaagctccgggagcgcgaggccaaggagaagcaggagaggcgcatcgacccctccctcgtcaggtatatatctcctctactctccctcttcccccatgtatctgtgtgcctctgctcttcttctctcgcggattcgtatgctactagtagttttgtctccggatcctaccgataagctcgtgctgtggctgctcgcgcgtttgcttgatgtaaccctaggcaattttgaatgttttgttacaaccaggctgggattttaagggcttgaaccggtttgcgtaccctccagtagattggaagaatattacaagtataacatagctaatgggttccagtttcctgtcaatttggtgtaatttgcagcgagccatgaaaaacctacaacattgatcacaatttatataatacctttgcatcttgttcagccggaatggttgctgacagaattgttgctatgttttatccagttttgaatatcatgagcgttgatgaccaagggtagtattagatggcaacatactggacgtggattgtttttaagcaatacaccattctaacagataggtgcatcattccttcaggtacaatgaatttgatcagcccatctgcagaatctgcaatgttactctgaaatctgaagcactttggcctgcacatcaagtttcacgaaaacatcatgaggtacacagagaaaatgaatcatagtcattctggatgatctatgcttggattgacattcgaaggatgtacacataacacatcattttactatctcatgtggtatgaatatgttgatggaaacacaaatacatatagaaattcaacagtgtaactgcaaatacatttctgctgagcatgctagcttatcaatttggataaaattttgtattagcatcgaagatggttgaaatttcatacatgctgtggtctgtgggttgttttggcagtatggtaccattctggttatgttcacttccactaattatctttttttttgttagtatctaaaaggaaaaaatattatgcggttcatattgctgataaccatggtgtttctattcttttccctttagaagttagttgctgccttaaatagcatgcattacatcccatagaatttgtttgttcaaattgcagagatgtgagtctagtttaactgctccaaggataattgattgttctataacttcacatacatatattcagatctatggctgttactaggatttgaagtatatttgttatttaaagtgctcatgtacattactgacccatcttgtcatttttatgatacaggcaaaagccgctgcagctgcatctgctaaagctccatcaggtgcagggtctcgtggcaataaggccaatcatgaacaacctgcagagtctcagaaaccaaaatcttccacattgcctgccaacttttttgaaaaccagggaatgaagaggcatagtgatggtgagagtaacaaacacgccctcccatctgtctgcgctaaatttaaagatagagtgagaaagcaactggaacagccttggttatactttgtagtcatttgcttatatccttttatttgtgagatctctgtaaatattgatttttcgttgagttctcagttgataggctctagaattgtattaatcatgcatctaatttcacattttggtccacacatggtacaatgctcatatgccatgtgtctgtatagatcttcaatgaaattgattatcttattcttaaaataagcaggatagcattatcatgtagtgctttgatttttataggctaattgtaaacagatttaactttaccataaaatcgccataaactactgaaatttcagtcagctaagattgcatcttagactttacattccttagtacatctgataatagctaaacctgcgaaatgttactatttgtgtgagaaatggtgttaggatttgaaattttctttgaacatttttgtttgagacaacattttgtattttctgaagaagaaagaaacaaatatccatgttatgctatcctctgtagagtgatcacctgcatgtacagaacatatattaattcctattttatcaagcttcctgctagtagtattatttatatatgctatagaaagaactgaagtgtccatttagcagtccaaaaaatatgtttcatgctcatgaaccctaatataacaacttatatgactaggcgctggttctgaaggaaggtctgtgcgtcgggaggtagctgatgttcagcaaaaaaccaaagaagcaagcaaaactaagccatctgtcaattttgagaaaataccaaagaaagaaagtcaagccaataccaatgtcaaaggtgttcttccagggaacttttttgactataatgatgaagatgaagatccagctcctactgaggcgaatagtgcacctggaaatcctccaatttcaaatcgcatgcaggtgaaaggtgtacctgatggcttctttgatggcaacaaaaacagcaatggcatgcaacccagtgaaccaagtcaatcgtctaaagccgtaaagagttcagaaacttctgaagtaaaaggatcgctaccagaaggtttctttgataacaaagatgcagatctccgtgctcgtggtatccaacctccgaaaatcgatatcaagtaaggttttcatcgacttgcatatgcattgcatttattaagtatatgcttggacctcttgcagctacacttgttattctcacataatatacccttgtggaagaatgaatataccttttgaaatggcaagtttgaacatcattcatgataaaaatttcaggcttttccttttcatggaagatgtcagcagaatttaacaatataattaaggctgattattaaccttactactgttacttccacaccctttttgcacttgtgcacttgtcaagttcatacctgcatgagggtcagagggttaataatcgtgtttatgttttttctgtgaactatgacatttgttctcttctttttagatcatattcttcctgcaaaaaaagaactgtattcagtttgtattgattgatagttgaagttttaacatgaaatatattattaaaaaatatttttcagtgatgcttacaaagaatttgagaaggaaattcaggaggacttgcaggaagttgatgatcgccttgaagaagaggaggttaggcttctctattacctagttacacaatataaagaataccttcgcttgtctggtgcaaatgctagtttgaactgctatattagcttttttttatgtgaactgtagattgatgctgctgctgagagagaagagtacttgacattagagcaagagtatgttccttagccacaacttgctatttttgagccttcatgcttagcgaagcgaaggttttttattttcatcgtccatttattttgtacacagggagtataggcagcgggtggatatgctgaagaaacagcttaccgagtcaaaagccgcccgtaccactaaagcaaacagcaaacctgttggtatggacatgttgtcaagcagcgactcatctagtgacgaggaagatgacagcacggattttgctgttgattggagagcacaacatttgaaatgatgtggagatttttgtgattggctacccaccgacgatgacaacatagatctgttagcatccaccattgtgcatccgtgacaatcagatcccagcacctctaggtttctgcttgaggagaagatgatctcttttttttttctgttgcatcttgtcttttatcggaaaaatgttcgagctaatcatgaattaacacgatgagaatagttttggag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0495100, RefSeq:Os05g0495100