Os05g0495200

From RiceWiki
Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0495200| Description = Eukaryotic transcription factor, DNA-binding domain containing protein| Version = NM_001062464.1 GI:115464658 GeneID:...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0495200

Description

Eukaryotic transcription factor, DNA-binding domain containing protein

Version

NM_001062464.1 GI:115464658 GeneID:4339196

Length

1689 bp

Definition

Oryza sativa Japonica Group Os05g0495200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24368198..24369886

Sequence Coding Region

24368533..24369207

Expression

GEO Profiles:Os05g0495200

Genome Context

<gbrowseImage1> name=NC_008398:24368198..24369886 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24368198..24369886 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgatgtcccaagtcaattgctcttctcccatccggaggtgcctgatagcttcgatgatttcttgaacaacatcacaacctgcacccacacccacacctgcaatcctcctggtccgtcggcaaccatgcacacccacacatgcttgcacacgcacacccaggtcttcgcctccggcagtggcgaagatgacatcaaggaggacctgacgaagacccggaggccgctggggaacagggaagccgtgcgcaagtatcgggagaagaagaaggcgcatgcggctttcttggaggaggaggtcaagaagctccgcgccgccaatcagcagctgctgaagcgattgcagggccatgctgcgctcgaggctgaggtgatcaggttaaggagcatcctactcgatgtccggggcaagattgatatggagatcggcacattcccttaccagaagccgtgcagtgttggctctgtggcatgcactgatccaggtatgtgcttcaatggcaattctgagattggaggggtctgggaggagtgctctagaccagtgggtgcagatcgcatgatcgacaaagatggtagcatgtcacaggaaattgatatcccaggaccggtgcattccatttccatggatgttgtcggaagcttggtgacttctgcttctctatctgagtga</cdnaseq>

Protein Sequence

<aaseq>MDDVPSQLLFSHPEVPDSFDDFLNNITTCTHTHTCNPPGPSATM HTHTCLHTHTQVFASGSGEDDIKEDLTKTRRPLGNREAVRKYREKKKAHAAFLEEEVK KLRAANQQLLKRLQGHAALEAEVIRLRSILLDVRGKIDMEIGTFPYQKPCSVGSVACT DPGMCFNGNSEIGGVWEECSRPVGADRMIDKDGSMSQEIDIPGPVHSISMDVVGSLVT SASLSE</aaseq>

Gene Sequence

<dnaseqindica>680..1354#aggatcctcccccaactttgatctctcccaccactactactcatccatcaaatcaacgtcgctcccctcctcctctcgcggcgcggctcctttccaagattctccgatccccaaacccccaatcgccagagcaaagaagggggaacatcgccaggaaaaagatcggtggcgagagaaggcggaaagcgaaggaaagcgaggggagcaaaaggagagagagagagagtcttttcaattttcttttgtttttcttttctccctgcaagaggcagctcggcgttgctgcgaattccatccatgtcgctcgccgtcctcaggatgaggttttgatgcccgaatccggccttttctctgtctatttcagcacctcatcgattttttttggctcttgtgatgccctctgtcgtagagctccccaatcagggcttcctcacttgtgccatgtttgttgctcactcctttcttgattattagttggtagctcaccagtttttgcaggggttttggcagatcatgtagtctgcctgctcaatccctggtcagttaatctagaaacctcattgaataaacaagttcagaggttcttgattccttttgttgcaattgcaattgcaactttgttgtgcaaattgtccattgacccatacaaaggagattgttcttggcgcattctgcggcaatggacgatgtcccaagtcaattgctcttctcccatccggaggtgcctgatagcttcgatgatttcttgaacaacatcacaacctgcacccacacccacacctgcaatcctcctggtccgtcggcaaccatgcacacccacacatgcttgcacacgcacacccaggtcttcgcctccggcagtggcgaagatgacatcaaggaggacctgacgaagacccggaggccgctggggaacagggaagccgtgcgcaagtatcgggagaagaagaaggcgcatgcggctttcttggaggaggaggtcaagaagctccgcgccgccaatcagcagctgctgaagcgattgcagggccatgctgcgctcgaggctgaggtgatcaggttaaggagcatcctactcgatgtccggggcaagattgatatggagatcggcacattcccttaccagaagccgtgcagtgttggctctgtggcatgcactgatccaggtatgtgcttcaatggcaattctgagattggaggggtctgggaggagtgctctagaccagtgggtgcagatcgcatgatcgacaaagatggtagcatgtcacaggaaattgatatcccaggaccggtgcattccatttccatggatgttgtcggaagcttggtgacttctgcttctctatctgagtgaatgcttttaaaggatgtttcagttgtttggcagattttcaatccatgccatgccaggttcttcttacttgaggggtaaacaatttttgtcagttatactctcatggaataaaagggtaacaacgagtaggaactgatctggtgccttttatgttctaatgatactccttgtgtaagtttttcttttttagttaatgactcctcgtgtaagtgttcactgtgtatagactacggagtactcgtgtatatatatatatagcactgcaagaatatgtgcttaatcatgtttttgaaaattgtaatgccagtatgtaaatgaagtatacttcagttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0495200, RefSeq:Os05g0495200