Os05g0497675

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0497675| Description = Ribosomal L11 methyltransferase family protein| Version = NM_001187547.1 GI:297724224 GeneID:9268339| Length = 2079 ...")
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Gene Name

Os05g0497675

Description

Ribosomal L11 methyltransferase family protein

Version

NM_001187547.1 GI:297724224 GeneID:9268339

Length

2079 bp

Definition

Oryza sativa Japonica Group Os05g0497675, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24527937..24530015

Sequence Coding Region

24527937..24528278,24528465..24528548,24528734..24528874,24529032..24529097,24529229..24529396
,24529483..24529812,24529917..24530015

Expression

GEO Profiles:Os05g0497675

Genome Context

<gbrowseImage1> name=NC_008398:24527937..24530015 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24527937..24530015 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgccgctggtgcgccccggccgcgccgcccctctcctccgccgcctccgccgccgcctcctcctcctctcgtcgccccaaaccccgtcgccttcctcctctccgtacagcgtcagcagcagcaaagtctcgcctctcctcctcctcctctcggctcgcccctcgccgtcccgcgccggcgatcgcggcgcctggcgaggagtgagctcgtgcggcgccacccgcgcggtcgacgtcggggacgaggcggcgtcgtcgtcgggctcccccgcggccgccggctccgacctctcctcgccctacctctccgtccgcatccgctgccgcaaggaggacgctgaagtgctctctgagtccctcttgtgctttggtgctacctccgtcaccgtggatgacattgccgctgccggaaatctcgatgagatcaccattacctccatttttgctcatggggaagatgtgggctcgtgcgtatcgagtgctgcaagctcagctggattggagtacaatccggtgtatgaaagctctgtaggaaagcaatgtgattgggtgacggttgtgcaggaaacctacgagtccacaaaagtcattgatggtctttgggtaattcctaaatggagaactcccccagatccacaggctatcaatataatcatcaatccaggtctggcttttgggactggggagcatcccacaactaaactgtgccttctgcttctacgggaaacagttaaagggggtgaacgtttcttggactatggaacaggcaccggagttttgggaattgcagctctgaagatgggtgcggcactgtccaatgggatagacatagaccctcaagctgtaacctctgcttgtgaaaatatgatgttgaatggtatagattccaacaaaatgcttgtttacttggtaccaactaatgctcagtctgcatgctttccaagtaatattgacaaatcagaagagaacaggcccactggtaaccttgagttgaagtcgtcaaaaggatcatatgacattgttgccgcaaatatactcctgaatcccctgctggagctggttgaggacattgttggttatgcaaaatctggtggaatagttgctgtctcagggatattaagtgaacaggtgccgaaagttgaagaagcttactccagatacttggagaacatctcagtgtcagaaattgatggatgggcctgccttcggggaaacaggagagcatag</cdnaseq>

Protein Sequence

<aaseq>MLPLVRPGRAAPLLRRLRRRLLLLSSPQTPSPSSSPYSVSSSKV SPLLLLLSARPSPSRAGDRGAWRGVSSCGATRAVDVGDEAASSSGSPAAAGSDLSSPY LSVRIRCRKEDAEVLSESLLCFGATSVTVDDIAAAGNLDEITITSIFAHGEDVGSCVS SAASSAGLEYNPVYESSVGKQCDWVTVVQETYESTKVIDGLWVIPKWRTPPDPQAINI IINPGLAFGTGEHPTTKLCLLLLRETVKGGERFLDYGTGTGVLGIAALKMGAALSNGI DIDPQAVTSACENMMLNGIDSNKMLVYLVPTNAQSACFPSNIDKSEENRPTGNLELKS SKGSYDIVAANILLNPLLELVEDIVGYAKSGGIVAVSGILSEQVPKVEEAYSRYLENI SVSEIDGWACLRGNRRA</aaseq>

Gene Sequence

<dnaseqindica>1..342#529..612#798..938#1096..1161#1293..1460#1547..1876#1981..2079#atgctgccgctggtgcgccccggccgcgccgcccctctcctccgccgcctccgccgccgcctcctcctcctctcgtcgccccaaaccccgtcgccttcctcctctccgtacagcgtcagcagcagcaaagtctcgcctctcctcctcctcctctcggctcgcccctcgccgtcccgcgccggcgatcgcggcgcctggcgaggagtgagctcgtgcggcgccacccgcgcggtcgacgtcggggacgaggcggcgtcgtcgtcgggctcccccgcggccgccggctccgacctctcctcgccctacctctccgtccgcatccgctgccgcaaggaggacgctgtcggtacccactcccctctccgcgcgcggccagccattttctcggccggtgcggtcgctttcaccctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctccaagtcgatttacgagttttttcgccgtgttttccatgtggcatcgcggattcaggaagtgctctctgagtccctcttgtgctttggtgctacctccgtcaccgtggatgacattgccgctgccggaaatctcgatgaggtgagccttttctcagtttctcttgctttcatttgtagaactggtatttactcagatgcttgacactgcaattgaacatttggttaattctagctgaatataaatttcaggtctcttgttggcctagttgctgcagatgacacaggagatttctctagtataatagtggtgttaattttctgcagatcaccattacctccatttttgctcatggggaagatgtgggctcgtgcgtatcgagtgctgcaagctcagctggattggagtacaatccggtgtatgaaagctctgtaggaaagcaatgtgattgggtgacggttgtgcaggttaggagttaggacgtactccctccgtcccaaaaaaaaacccaacctgtactaggatgtgacaaatctggatatactctatgttatcaactccatgttgtcatggtagtggcagattcttgaaatgacttgacaggatttctgattgtgtttgcaggaaacctacgagtccacaaaagtcattgatggtctttgggtaattcctaaatggagaactcccccagtatgtgtacatacatcatgctgttttcttttgatttattacaaatgaatgttatggaaatttatgtataactgataatctagttgatctgaaattaccattttgattgtgtccatcctttccattcacaggatccacaggctatcaatataatcatcaatccaggtctggcttttgggactggggagcatcccacaactaaactgtgccttctgcttctacgggaaacagttaaagggggtgaacgtttcttggactatggaacaggcaccggagttttgggaattgcagctctgaaggtgccatctcgtactgttcttgtttactactggtaggtatcatgaaatgcaatcttaccctaattcatgtgctcgtttctacgcagatgggtgcggcactgtccaatgggatagacatagaccctcaagctgtaacctctgcttgtgaaaatatgatgttgaatggtatagattccaacaaaatgcttgtttacttggtaccaactaatgctcagtctgcatgctttccaagtaatattgacaaatcagaagagaacaggcccactggtaaccttgagttgaagtcgtcaaaaggatcatatgacattgttgccgcaaatatactcctgaatcccctgctggagctggttgaggacattgttggttatgcaaaatctggtggaatagttgctgtctcagggatattaagtgaacaggtaaaggaaaggaactacaaatgtaatatgccagagttaagtgtttttttttaaacttaaatgttcctctcagtatcacttcacctgtctattatctcattcaggtgccgaaagttgaagaagcttactccagatacttggagaacatctcagtgtcagaaattgatggatgggcctgccttcggggaaacaggagagcatag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0497675, RefSeq:Os05g0497675