Os05g0499400

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0499400| Description = Haem peroxidase family protein| Version = NM_001062491.1 GI:115464712 GeneID:4339223| Length = 1776 bp| Definition ...")
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Gene Name

Os05g0499400

Description

Haem peroxidase family protein

Version

NM_001062491.1 GI:115464712 GeneID:4339223

Length

1776 bp

Definition

Oryza sativa Japonica Group Os05g0499400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24634304..24636079

Sequence Coding Region

24634576..24634821,24634898..24635083,24635167..24635332,24635458..24635909

Expression

GEO Profiles:Os05g0499400

Genome Context

<gbrowseImage1> name=NC_008398:24634304..24636079 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24634304..24636079 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcccgggagctggagctgctgctgtttttgctggccctacgggcgagcggcgaggtcgtcgcgggttcggcggaggcagcggcagcggcagcggcgtggcccgcgctgcaggtggggttctaccatgccaagtgccctgtcgcggaggacgtcgtgctgggcgagatgaggatgatcctcgaggaggatcccacgctcgcgccgtctctgctccggatgcactaccacgactgcttcgtccaggggtgtgacggatcgatcatgctgaggtcgaggagcgggaagggggagagggacgcgacgcccaaccggagcatgcggggctacgacgccatcaatcggatcaaggcgaggctggagaccgtctgcccgctcaccgtctcctgcgccgacatcatcgccatggcggcgagagacgccgtctacctgagcaaggggccgtggtacgacgtggagaccgggaggagggacggcgacgtgagcgtggccgagtacgccgagaacgacctggcgccgccggactccaacatcgtcgacgtcaagaccttcttcagcgtcaagtctctcaacgccaaggacatcgccgtgctcttcggatgccacagcatcgggacgtcgcactgcggggcgttccagaagcggctgtacaacttcaccggaaggatggaccaggacccgtcgctggacgccggctacgcggcgaagctcaagaagctctgcccgccggggcacggccacgaccacgaccacgacggccatggcggcgccggcggcgcggccaaggtgcccatggaccccggcagcggcttcacattcgacctgagctactaccggcacgtgctcgccacgggcggcctgttccagtcggacggcagcctccgcgacgaccccgtcacgaggggctacgtcgagaagctcgccaacgcgtcgtcgtcggaggagtacttcgccgacttcgcggcggcgatggtcaagatgggccgcaccgacgtgctcaccggcgatctcggggcggtcaggccgacgtgtgacagcctcgtcgactag</cdnaseq>

Protein Sequence

<aaseq>MSRELELLLFLLALRASGEVVAGSAEAAAAAAAWPALQVGFYHA KCPVAEDVVLGEMRMILEEDPTLAPSLLRMHYHDCFVQGCDGSIMLRSRSGKGERDAT PNRSMRGYDAINRIKARLETVCPLTVSCADIIAMAARDAVYLSKGPWYDVETGRRDGD VSVAEYAENDLAPPDSNIVDVKTFFSVKSLNAKDIAVLFGCHSIGTSHCGAFQKRLYN FTGRMDQDPSLDAGYAAKLKKLCPPGHGHDHDHDGHGGAGGAAKVPMDPGSGFTFDLS YYRHVLATGGLFQSDGSLRDDPVTRGYVEKLANASSSEEYFADFAAAMVKMGRTDVLT GDLGAVRPTCDSLVD</aaseq>

Gene Sequence

<dnaseqindica>273..518#595..780#864..1029#1155..1606#acaggctcgagcttactagctaggcggagtagagtccgtcgcactcaacgctctgtttcacacacgcacgcacccatctgaaagcacggcgcgaccaaacgcatcgacctttggtttgcccgcgtctcgtcgccatctttgtactacgccaatggctctccgctgcctagctgctgccgcagtacagcttgatcgttgcccgtaacctcccgtggctccgatcccgtctccggcgcggcgcgcggctcggcgttgagacagtttgccgcctcatgtcccgggagctggagctgctgctgtttttgctggccctacgggcgagcggcgaggtcgtcgcgggttcggcggaggcagcggcagcggcagcggcgtggcccgcgctgcaggtggggttctaccatgccaagtgccctgtcgcggaggacgtcgtgctgggcgagatgaggatgatcctcgaggaggatcccacgctcgcgccgtctctgctccggatgcactaccacgactgcttcgtccaggtaattaacaatttttaattgccccaagctacttcatgctcgtccatggcgatcatcgtggttgggttggttgcaggggtgtgacggatcgatcatgctgaggtcgaggagcgggaagggggagagggacgcgacgcccaaccggagcatgcggggctacgacgccatcaatcggatcaaggcgaggctggagaccgtctgcccgctcaccgtctcctgcgccgacatcatcgccatggcggcgagagacgccgtctacctggtacgcgcctcacggaacaaatccatggcttctttgcaaatcgatatcgcgctctgcttctgaatgctccttgattcgcacagagcaaggggccgtggtacgacgtggagaccgggaggagggacggcgacgtgagcgtggccgagtacgccgagaacgacctggcgccgccggactccaacatcgtcgacgtcaagaccttcttcagcgtcaagtctctcaacgccaaggacatcgccgtgctcttcggtacgtatactaccacgccgtctccttttccccttttgcttctcgcgttggacgacggcgacagcttatcagaacgccggtaatggccattggccgccgccggcggcggcggcggcgtcgtgcaggatgccacagcatcgggacgtcgcactgcggggcgttccagaagcggctgtacaacttcaccggaaggatggaccaggacccgtcgctggacgccggctacgcggcgaagctcaagaagctctgcccgccggggcacggccacgaccacgaccacgacggccatggcggcgccggcggcgcggccaaggtgcccatggaccccggcagcggcttcacattcgacctgagctactaccggcacgtgctcgccacgggcggcctgttccagtcggacggcagcctccgcgacgaccccgtcacgaggggctacgtcgagaagctcgccaacgcgtcgtcgtcggaggagtacttcgccgacttcgcggcggcgatggtcaagatgggccgcaccgacgtgctcaccggcgatctcggggcggtcaggccgacgtgtgacagcctcgtcgactagtttattcggcgtcccgccacatttgtgatctgtagaattttatatggttttctctgtaacatatatgtaatttcgatttagattagggaaaggttgagacttgagagaagttgcagtttctacgcttttgaggagactgattggaacagcgtatgaatctagagttaaac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0499400, RefSeq:Os05g0499400