Os05g0501700

From RiceWiki
Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0501700| Description = Universal stress protein (Usp) family protein| Version = NM_001062507.1 GI:115464744 GeneID:4339239| Length = 3046 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0501700

Description

Universal stress protein (Usp) family protein

Version

NM_001062507.1 GI:115464744 GeneID:4339239

Length

3046 bp

Definition

Oryza sativa Japonica Group Os05g0501700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24743385..24746430

Sequence Coding Region

24743474..24744272,24746202..24746209

Expression

GEO Profiles:Os05g0501700

Genome Context

<gbrowseImage1> name=NC_008398:24743385..24746430 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24743385..24746430 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacccacccggcctccccggtcgccggcggcgagaaggccacgccgccctccacgccgccgccggtgcgcctggcggggggtgcggcggcggcgatccagcccaactcgccgcggttcttcttctcctcgctggcggcggcgtccgcgtccgcctcctccccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaagtggtccgtgcagaactacctccgcccgggcgacgccgtcgtgctcctccacgtccgccccacctccgtgctctacggcgccgactggggctccatccccgtctccgtcgacgacgacgactccgcccccgacgccgcccagcacgccaacgcccacgccgccacgcgcgacgagcccgaggaggccaagaagaagcgggaggaggacttcgacgccttcacctccaccaaggcgcaggacctggcgcagccgctcgtcgccgcgcagatccccttcaagatccacatagtcaaggaccacgacatgaaggagcgcctctgcctcgaggccgagcgcctcggcctgtccgccatgatcatgggcagccgcggcttcggcgcctcgcgcagggcgggcaaagggaggctcgggagcgtcagcgactactgcgtgcaccactgcgtctgccccgtcgtggtcgtgcgctaccctgatgatggtgcggcggctggcggtggggaggccgtgggggatgagctccgcacggtgcctgaggatgaacccgtctaccatgaagctcccgagggtcagaaagaaaattga</cdnaseq>

Protein Sequence

<aaseq>MATHPASPVAGGEKATPPSTPPPVRLAGGAAAAIQPNSPRFFFS SLAAASASASSPHRRIAIAVDLSDESAFAVKWSVQNYLRPGDAVVLLHVRPTSVLYGA DWGSIPVSVDDDDSAPDAAQHANAHAATRDEPEEAKKKREEDFDAFTSTKAQDLAQPL VAAQIPFKIHIVKDHDMKERLCLEAERLGLSAMIMGSRGFGASRRAGKGRLGSVSDYC VHHCVCPVVVVRYPDDGAAAGGGEAVGDELRTVPEDEPVYHEAPEGQKEN</aaseq>

Gene Sequence

<dnaseqindica>90..888#2818..2825#aaaccgcagcattcaaagccaaaaaccctcgccttctccccctttgcccagatcgagcgaatccaatccacccccgaatcgaatccgcgatggcgacccacccggcctccccggtcgccggcggcgagaaggccacgccgccctccacgccgccgccggtgcgcctggcggggggtgcggcggcggcgatccagcccaactcgccgcggttcttcttctcctcgctggcggcggcgtccgcgtccgcctcctccccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaagtggtccgtgcagaactacctccgcccgggcgacgccgtcgtgctcctccacgtccgccccacctccgtgctctacggcgccgactggggctccatccccgtctccgtcgacgacgacgactccgcccccgacgccgcccagcacgccaacgcccacgccgccacgcgcgacgagcccgaggaggccaagaagaagcgggaggaggacttcgacgccttcacctccaccaaggcgcaggacctggcgcagccgctcgtcgccgcgcagatccccttcaagatccacatagtcaaggaccacgacatgaaggagcgcctctgcctcgaggccgagcgcctcggcctgtccgccatgatcatgggcagccgcggcttcggcgcctcgcgcagggcgggcaaagggaggctcgggagcgtcagcgactactgcgtgcaccactgcgtctgccccgtcgtggtcgtgcgctaccctgatgatggtgcggcggctggcggtggggaggccgtgggggatgagctccgcacggtgcctgaggatgaacccgtctaccatgaagctcccgagggtcagaaaggtctggctatgttcttgcttgatcttgttcttactgtttgcattcattgatttgagtgatttgccatgatgttggtaagggaatgggttgcaattggttgggtattgatggcaagggtacacatatgaggacaagaattgctactagcaaactgctgcattgcatgactaactgaatttcccgcgcagcttgtgtggaactagattatccatttgaaagtagaattgtttttgatatgcaattcttccttctattatataaaggcaattgtattttgtataggagtacatctgtaaaacagtaacgtttacagccattctaccacattgcaatccaacatgattaacggcatagattttctccttttttttctctctctaaatgatgtgatagattcagttgggaataccgaatacttacctttctagtgttattagcaacctaagtatgtgacacttgctagacagctgtcctccctgtttttctcatttggactgatagctatcctacaaatgcataattaatgtgtgtattggggtaaaacataacccaatagaaatgccagagcacgaaagaaggtgcccctagaaccgtgagctaacagttgtattaacaacagtatgcaaagctatgttggacatagttgtgccattctgtattgagtctgtttggaggtaatgctatgttcattacacgcataacaattctatatgagcagagtggatgagaaggtccacttgcgttataggacagaacatttaattatttcattaaggaatttgacaccttaactttcaagggcacaagtgttttgtttatgagtatagtgagagtagatgatcactgcaagtaataactaaattaggaacaaaattatgtagatcaagaaagttttgcttgctcggcattgtgcaatcataaaaattataagtcctacaggtgtatcgaagaaaggcacattactagtacccattgttcctgttcagttttatcccttagaagaccatgccaggaaatgatttttttttttggagagcatgtataagagtaggaatcaggtcttgcttcagttacctttatttaaaatgttttggattaattagctggcttattttacttataaaatttaagatcctaacatgttgttttatccttttataaggtaagtctaatcatggctaagtacaatatacctaacacacatactgaaaagccatgcaggtatgtatagaaaattcttcagactggtctgtcagcctaaatcagcaatcgctgtattgtgttaaaaaaaggagcatttggaaatactttttatgtgcggtcttgcaagttgcaactgttgagataaatatgactgcaagtcttggcttagatttatatttggtacatatgcaaaaggcctgtacccttgtattgagaaaaaaatacactacatcgcacagctagctttttaggacgtgattcagtttcttttttttttctgtcatgttggttgtgatttgtgaatttccaaggctttaacgccaccattttggaaaccaaacaaaaaaaaattacagtatcatatgacttgcagtcttatttgactccctcagctgctgtctttcagaagattagttttgatgcttgataggccaaataggttttggttgctttttcagtaagcattgatgagacctatactgtattctttggggccatacacacctagagtgttcgtcttctttggggctaaaatctttgagctgaacataactttctttgctgtcatgttctgcataataccatactggggcttgcatttttagtttgttcggcacattaaaatgctaactggtctgtatcattgaggtcttgctctccctcattctctattgtagtgtatcaaagttgtccctcccatgacctgaattttcttctttgttacagaaaattgaggtgaaaagagacgcatccagatcacaaggagagcgtgcgacttgctaatgccgatccctgtgtaactgtgtggtcgcttctatgttctgctccgcgatgcatttcgagcatgtatcagacttgtagatcgttgccctttgctgccatttgcttcctgagagatatttattatgttgtccggaggagaataatctatttctgaaagaattgtagctgttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0501700, RefSeq:Os05g0501700