Os05g0502500

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0502500| Description = Conserved hypothetical protein| Version = NM_001062510.1 GI:115464750 GeneID:4339245| Length = 3339 bp| Definition ...")
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Gene Name

Os05g0502500

Description

Conserved hypothetical protein

Version

NM_001062510.1 GI:115464750 GeneID:4339245

Length

3339 bp

Definition

Oryza sativa Japonica Group Os05g0502500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24776638..24779976

Sequence Coding Region

24776978..24777039,24777619..24777720,24778281..24778336,24778439..24778473,24778969..24779046
,24779573..24779944

Expression

GEO Profiles:Os05g0502500

Genome Context

<gbrowseImage1> name=NC_008398:24776638..24779976 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24776638..24779976 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcgctgctgccgcctactcatctcctcactcctcccccgctctgctgctgctcgtacgctctacttctcccgagagccaggagggcgcctccaagattctcgaatggggccttctccgcggcggaatcgctggtccggggtgagttcttggggaaagtcgggaccttggctcggagaatggagggaaggcggcgccttgccgtggctagtgccgggagaggcccactttttggcggcggcggcggcggtggcgggcagcggggctccggccgggtggtggggaaccttgccttcgccgccctcttgacgttcctcgccaccaccggccagctccggtgggttctggacgccatcgtctccctctggcttctcacaatactgctgcctattttgggtctcgctgcatttttcttctttgcaggccaagacatacttcagagcaattgccccaactgcggaaaaagcttccagatactgaagtcatctttgaaggatggtccacaactgtgtccatattgtactcaacctttctcggtgcagggaaacaaatttgttagagaatctgctagattttcatctggaaggaccaccacaggtgctcaagccttcagtgagtccttcaaacgtggttcggaggggaagaagacaccttctggaactgttgtagacatcgaagctgaagtgaaggatgccgagtga</cdnaseq>

Protein Sequence

<aaseq>MASLLPPTHLLTPPPLCCCSYALLLPRARRAPPRFSNGAFSAAE SLVRGEFLGKVGTLARRMEGRRRLAVASAGRGPLFGGGGGGGGQRGSGRVVGNLAFAA LLTFLATTGQLRWVLDAIVSLWLLTILLPILGLAAFFFFAGQDILQSNCPNCGKSFQI LKSSLKDGPQLCPYCTQPFSVQGNKFVRESARFSSGRTTTGAQAFSESFKRGSEGKKT PSGTVVDIEAEVKDAE</aaseq>

Gene Sequence

<dnaseqindica>2938..2999#2257..2358#1641..1696#1504..1538#931..1008#33..404#agaatcttctccctgctgaaccttccccttccatggcctcgctgctgccgcctactcatctcctcactcctcccccgctctgctgctgctcgtacgctctacttctcccgagagccaggagggcgcctccaagattctcgaatggggccttctccgcggcggaatcgctggtccggggtgagttcttggggaaagtcgggaccttggctcggagaatggagggaaggcggcgccttgccgtggctagtgccgggagaggcccactttttggcggcggcggcggcggtggcgggcagcggggctccggccgggtggtggggaaccttgccttcgccgccctcttgacgttcctcgccaccaccggccagctccggtgggttctggacgccatcgtctccctctgggtacgagcttcttgctgctgaaataagttgtagatgatgactggtatattcagaaactcctttctttagatgaaaaaatttggacttagtaggaatgaactatattactggttgctcggttgatgtgtgggcatgtattttaatatcataatatggttctacagttcatgatgaagtagcttcttagctgaaaattttccggtccgtttgtttccctttgcaaactgcacagtctgtatttcattggttacatttttcagttttcaccatgagtaggctgctacagcactagagtttattttcaccaaaaatagttgagaaatttgaattcttcagtaatgtaagaaccgaaattggcaatcttgtttagttcacctcctggtgcttaataagctcatttgattaagaattcacctttatgtaccatgaaaagagatattcaatctcattatcttttctgctgtctataatttcacagtactttgattgaaagtttaactttagctcttatcttgtgtcacaacagcttctcacaatactgctgcctattttgggtctcgctgcatttttcttctttgcaggccaagacatacttcagagcaatgtaaggcttctgaaatttagtatccagtaattatctaaagaaatagtattcagtaattttgtctagtttggtttccttttaattttggttggtgtgtttgctttcatttggacttcactcttacagagtgctagtttgtaataattggctgtagctcttttgagtaaaggtcgggatgctatttcattccattatctaaaaaaaatagtattcagtaatttattcatatgttagtaccaactgatttattacagtgaaaaaggttttctgtaattccccccttctgaaaataagtttgttatatatagtaaattcagtcttcaactcttcataaaggacagattatgagattagatgtctattgatacctggtagcaaacatatctgctatgaagggctaatagtatctatatgtatcgacgctgtaagcaaaatcattgtgatttgtttgcacaagtttgtcaatattcacaatcgtgtttcttttgctttcagtgccccaactgcggaaaaagcttccagatactgaagtaagcacagaaaaaaaaactaaaaagcccaaaacttcttgtattacatagatttgtgattataacttcaaaaaaaaattgatcagcttgattgtcttttaggtcatctttgaaggatggtccacaactgtgtccatattgtactcaacctttctcgggtaagcaacttgctgctatctatttccagtttactgatatttgcgtgagactaatacctttagttatgatatgcatgcttgctgctgtcctgctagaaatttgcagaacaaaattaatctaggacatgttcactccattagttaattgctttttttgctgtcttttaagctcttgcaggcttcttttaatttttgctagtaatagctttagaccttgctttatgttgaattgtggatattttcaaaaatgctcatctgttaatacacctggttgaaaccttcttaaccattacttttctttctatgtgctgcttctccgccattgggaaaaaaaaaagaaacacaggctttgctgatttcatgaattatttattctctgtggacttatgttgccattagtcaaatgaaaatgaaacgtcttataatatctgaatgttttttttgggacataattatatttgaattttttactttcctcagaacagaacaaacatttttggtatatatgtggaatcgtctaaattgaggttttgtcgggtttgtccttgtacatggtgcagtgcagggaaacaaatttgttagagaatctgctagattttcatctggaaggaccaccacaggtgctcaagccttcagtgagtccttcaaacgtggttcggagggtatgtaaatcatcagtccatcaatcaccttcttttcctcttcccgtggctttaaatatatgtacacacattagtaaaaacaattagtgattttttaaataatgaaaaaaaaatggaacttaggtggagaatttcagatatcctcagctaatcagggaaaatatgatgaaaatcctatatttctctaccatggatattttacccattttttaattgagtagaagaggggaatccccgatgctagatttggttgggttgaatagtcagatacaaacggattagcgctgaccaaatttgaatgggtttaagttgtatgaggctgcagagttgcagtattcttaattgatttttaccacatgtgatatgcttgaatacgatatccaaacttatgcatcatcagagaatgcatccaagacaatcgatttcctatcatgtacatatatagtataccatcagtggaattcttaggtgccatttctctgtttctgttgattgattcatttgctgatatgtgtttttatttagaaccaccaatcatggcatttaatcagcaatcgcactatgtgttgcttcatgcagggaagaagacaccttctggaactgttgtagacatcgaagctgaagtgaaggatgccgagtgattcttctgcaggaatgtgctaagaatctctgcctcgttgacatcagttttgcagctcttcatggccaatttttcagagggctattaaatctggtagcagtgtcatggttgtaccaaccgttcgctagatttgttgatatgctaggtccaggatatcaagacgaactgacacttgattccataagtgacgacatgtagcgccttcttctcgttgcaacttgtaaattgcaattacctctgcttgtgtaaaagtaacaacagaaaaggtagatgtgaatatttacttcttttttttttttgcttttgtatgtggatgagcaatcaaagatcagttgaagaac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0502500, RefSeq:Os05g0502500