Os05g0503300

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0503300| Description = Similar to Sulfite reductase (Fragment)| Version = NM_001062513.1 GI:115464756 GeneID:4339248| Length = 4605 bp| De...")
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Gene Name

Os05g0503300

Description

Similar to Sulfite reductase (Fragment)

Version

NM_001062513.1 GI:115464756 GeneID:4339248

Length

4605 bp

Definition

Oryza sativa Japonica Group Os05g0503300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24824601..24829205

Sequence Coding Region

24824919..24824978,24825561..24825719,24825845..24825961,24826046..24826180,24826489..24826686
,24827194..24827490,24827580..24828362,24828938..24829114

Expression

GEO Profiles:Os05g0503300

Genome Context

<gbrowseImage1> name=NC_008398:24824601..24829205 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24824601..24829205 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggcggcggtggggggagccgagttccacgggttccgtgggggtggcggcggcgcggcgcagctgcagaggtcgcggatgctcggaaggccgctccgtgtggcgacccctcacgcggcggcccccgctggcggcggcgggtcgtcgtcggccagcatacgcgccgtctccgcgccactcaagaaggatgcatctgaagttaagaggagcaaggttgagatcatcaaggagaagagcaattttcttcggtaccctttgaatgaggaactggtctcagaggctcccaatattaatgacagcgctgtccagcttattaaatttcatggaagctatcaacagacggaccgtgatgttcgtgggcagaagaattactcgtttatgctccgaacaaagaatccttgtggaaaagttccaaaccagctttacttggctatggatacgctagctgatgaatttggtattggaacactccgattgacgaccagacaaacatttcagctgcatggcgttcttaagaagaacctgaagactgtcatcagcactgttataaagaatatgggttcatcattaggtgcctgtggagatctcaacagaaatgtacttgcacctgcagcaccttatgtcaggaaggatattctttttgctcaagaaacagcagagaatatcgcagctcttcttacaccacaatctggggcttattatgacctgtgggtggatggagaaaagataatgtcagccgaagaacctcctgaggtcacgaaagctcgcaatgacaacacatatggaacaaatttccccgattcccctgaaccaatatatggcacacagtatctgccaagaaagttcaagattgctgtcactgtcgctggagataactctgttgatattctgaccaatgacatcggtgttgttgttgtttcagatagtgcaggagagcctgttggcttcaacatttatgttggtggtggcatgggtaggacacaccgagtggagaccacattccctcgattggctgatccactgggttatgttcctaaggaagatatattgtatgctataaaagcaatagtcgtcacacagagggaaaatgggagaagggatgaccgccgatatagcaggatgaagtatctgattgataactggggaattgagaagtttcgggctgaagtcgaaaaatactatggaaagaagtttgaagattctcgtcctttgcccgaatggcagttcaacagctacctaggatggcaggaacagggtgatggaaaattattctacggagtgcatgttgataatggtcgtgtcgcagggcaagcaaagaaaactctacgagagattattgagaagtacaatttggaagttagcattactccaaaccagaatcttatcttatgtgggattgatcaagcatggaaagatcccatcacagcagctcttgctcaatctggcctgctggaaccaaaggatgttgatcccctgaatattacttccatggcatgtcctgccttaccactgtgccctctagcacaaacagaagctgaacgagggattctgccgattcttaaacgaattagagcagtttttgataaggttggcatcaaggaccatgagtcggtagtggtgaggataacaggctgccctaatggatgcgctagaccatatatggcagaggttggctttgttggtgatggcccaaacagttaccagatatggcttggaggaacaccaaaccagagtaccctagctgaaacctttatgaataaagtgaagcttcaagatattgagaaggttttggaaccattgttttcctattggaacagcacacgtcaggaaggtgaatcttttggtagcttcacacgccggacgggatttgacaaattgaaagaggtagtgaacaagtgggcagagtcagcatcagctgcatga</cdnaseq>

Protein Sequence

<aaseq>MSAAVGGAEFHGFRGGGGGAAQLQRSRMLGRPLRVATPHAAAPA GGGGSSSASIRAVSAPLKKDASEVKRSKVEIIKEKSNFLRYPLNEELVSEAPNINDSA VQLIKFHGSYQQTDRDVRGQKNYSFMLRTKNPCGKVPNQLYLAMDTLADEFGIGTLRL TTRQTFQLHGVLKKNLKTVISTVIKNMGSSLGACGDLNRNVLAPAAPYVRKDILFAQE TAENIAALLTPQSGAYYDLWVDGEKIMSAEEPPEVTKARNDNTYGTNFPDSPEPIYGT QYLPRKFKIAVTVAGDNSVDILTNDIGVVVVSDSAGEPVGFNIYVGGGMGRTHRVETT FPRLADPLGYVPKEDILYAIKAIVVTQRENGRRDDRRYSRMKYLIDNWGIEKFRAEVE KYYGKKFEDSRPLPEWQFNSYLGWQEQGDGKLFYGVHVDNGRVAGQAKKTLREIIEKY NLEVSITPNQNLILCGIDQAWKDPITAALAQSGLLEPKDVDPLNITSMACPALPLCPL AQTEAERGILPILKRIRAVFDKVGIKDHESVVVRITGCPNGCARPYMAEVGFVGDGPN SYQIWLGGTPNQSTLAETFMNKVKLQDIEKVLEPLFSYWNSTRQEGESFGSFTRRTGF DKLKEVVNKWAESASAA</aaseq>

Gene Sequence

<dnaseqindica>4228..4287#3487..3645#3245..3361#3026..3160#2520..2717#1716..2012#844..1626#92..268#acgcacgaaatatcccactcgcttcgacactctcttccccttcttctcccggagaaaacctcgagccaaggccccgactccgactccggtgatgtcggcggcggtggggggagccgagttccacgggttccgtgggggtggcggcggcgcggcgcagctgcagaggtcgcggatgctcggaaggccgctccgtgtggcgacccctcacgcggcggcccccgctggcggcggcgggtcgtcgtcggccagcatacgcgccgtctccgcggtgagtttccagtgctgtttgttttctctcgtgatttctcgtctcgtgcgagagagagatttcgggttttaccgtctggagaaggatttttttttatctccagtggggggtttaactgatcatatacaattgatcgaagtggtcccctattgaaaatggtatggtgtgtgatggtttttgagcacctggatgattcattttccgaattcaccttacctgttgatggatttgtccaggtggtattggatcaaatgtctgcagttgattctcttgtgcagcaactgtaatatgctagtaatcagttaagagatgaagagagagcttttgttcaaatcagtctcccttgtagtgtcgataccttaaaaaaaatggtctgtcataggttgcaaagattccatttgtagacgttagtaataaacttatagcaattgctttgtcttattcatttacttcttcaatgttggttacattatattgatctccactaccactcaatacaaaatactgtgcaacgatatactagtggaatactcgtggttgcttcagttctgaacccttgcattgtgtgcctgcagccactcaagaaggatgcatctgaagttaagaggagcaaggttgagatcatcaaggagaagagcaattttcttcggtaccctttgaatgaggaactggtctcagaggctcccaatattaatgacagcgctgtccagcttattaaatttcatggaagctatcaacagacggaccgtgatgttcgtgggcagaagaattactcgtttatgctccgaacaaagaatccttgtggaaaagttccaaaccagctttacttggctatggatacgctagctgatgaatttggtattggaacactccgattgacgaccagacaaacatttcagctgcatggcgttcttaagaagaacctgaagactgtcatcagcactgttataaagaatatgggttcatcattaggtgcctgtggagatctcaacagaaatgtacttgcacctgcagcaccttatgtcaggaaggatattctttttgctcaagaaacagcagagaatatcgcagctcttcttacaccacaatctggggcttattatgacctgtgggtggatggagaaaagataatgtcagccgaagaacctcctgaggtcacgaaagctcgcaatgacaacacatatggaacaaatttccccgattcccctgaaccaatatatggcacacagtatctgccaagaaagttcaagattgctgtcactgtcgctggagataactctgttgatattctgaccaatgacatcggtgttgttgttgtttcagatagtgcaggagagcctgttggcttcaacatttatgtaatgtcttaacaaatgccctatttatatttttagcagctttcttaatcgtagatttcttatttagttatctctgacctccttttcaggttggtggtggcatgggtaggacacaccgagtggagaccacattccctcgattggctgatccactgggttatgttcctaaggaagatatattgtatgctataaaagcaatagtcgtcacacagagggaaaatgggagaagggatgaccgccgatatagcaggatgaagtatctgattgataactggggaattgagaagtttcgggctgaagtcgaaaaatactatggaaagaagtttgaagattctcgtcctttgcccgaatggcagttcaacagctacctaggatggcaggaacaggtaaagatactggctctgatatctttaaaaggcagtcttgtttaggatggatgcctccatacttgagcaattattttcttcatttataaactaattttagatgtgtttgctcctctgggtacaacttccacgtcgcatactcatatacttctatagtctgtcgcactcagggtttcccaaaccaccggggtccggggttaccacgccccggcggtaagcacggttaccgcgcggtaaccgtggcaaaccgttcaaaaccgtataaaatttatcaaaatttcaaattatattttaaatttatttgaatttaagaaggttaccgcggttttccttttaccgtacccccgcagtaatcacgtggttactggcggtttgggaaactctggtcacactccggtcagcataagaccattttgatccatctgctgttgtgtggacttattcattaacaattagttatttcctgagtaccaagttacattatttttcattatttgcctattacagggtgatggaaaattattctacggagtgcatgttgataatggtcgtgtcgcagggcaagcaaagaaaactctacgagagattattgagaagtacaatttggaagttagcattactccaaaccagaatcttatcttatgtgggattgatcaagcatggaaagatcccatcacagcagctcttgctcaatctggcctgctggtaagatttccttcgcttatatcatatccctggtctgtaacaatgaaatatgttgccctccatgagttccctgtaatattaaatccttgtaagcttatttgcttttgaagttgtgcaacattctattcttgtgtcttttttattgttactaattccggtatattgaggtttctatcgtgttgaaaatttcaaatagcactaaaagcagactgcgtctcttcttcgattgccccccaacagtttgatttctcaataaggcggtatgcttgtaggaatattttaatcaagttagccttttatgtatgtaggaaccaaaggatgttgatcccctgaatattacttccatggcatgtcctgccttaccactgtgccctctagcacaaacagaagctgaacgagggattctgccgattcttaaacgaattagagcagtttttgataaggtatagtctgtcgtcttgtcacaaaatttgaacattgtgtgcatcggatccatgtcagttgacataatgttctctcattaataggttggcatcaaggaccatgagtcggtagtggtgaggataacaggctgccctaatggatgcgctagaccatatatggcagaggttggctttgttggtgatggcccaaacagttaccaggtataggagatattgaaaatattttcctttaggctatgtttgtttggcttcattttcttttagtttgtttttcgtcattgcgttttcttctttttatcttcactaaacatttcttttgtggccagatatggcttggaggaacaccaaaccagagtaccctagctgaaacctttatgaataaagtgaagcttcaagatattgagaaggttttggaaccattgttttcctattggaacagcacacgtcaggaaggtgaatcttttggtagcttcacacgccggacggtgagtaatctttctgcaaatactcgtgaatgattttcgagatgaatcatttggaacctcacatgtagattggccactcaatggttcccaaaagatatcttattcttgtccattgtacggtcttcctgtgctcgtagttactaatttaatagaaaaactccaaagaacagtgatttgtttccttctgagagtattaaccacaccaagtaggggctaaacgaacatggacactgaatcagaatctgctgcctcattgcacctgaaaatgccaaaccagatcagatttttgatggatgttgttggccatacaatgcatagcctagtcatagtaaattgttaagccaagcagaaaacgttctgttagcaaaggagccatttgccagtgtgggattccttagcatatttttattatcaaactgagtcacattgccataattgttcatatatgttaattgatctactaggggtaggggataaggctgagatgaacttttccgctaaaggtggaattgcagtagctgaatatagtatagatgttgcttttcatcagcattatctcacctatcttttgcataaaaccagggatttgacaaattgaaagaggtagtgaacaagtgggcagagtcagcatcagctgcatgatggactgctttcgctgaacaagttgataacaattctgaccacgggtccaatgcgggcatcgtcaagggctctcaacataactatgtgagcattgcaggagaaaattttgtcaatttcgttgacaagattgaggactcgccgactcgggtttggaatcgttcgttcagataattaatcaaaatttttcgtgtactctggtttgagaaaaaaaaatgtgcttatgagaaaacaaaaggaaccctggctgtttactttggaataaattgcttggaaagtgtactgaataaatttttccattgtggtgtttgtttttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0503300, RefSeq:Os05g0503300