Os05g0506400

From RiceWiki
Revision as of 10:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0506400| Description = Conserved hypothetical protein| Version = NM_001062519.2 GI:297604722 GeneID:4339255| Length = 2778 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0506400

Description

Conserved hypothetical protein

Version

NM_001062519.2 GI:297604722 GeneID:4339255

Length

2778 bp

Definition

Oryza sativa Japonica Group Os05g0506400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25078823..25081600

Sequence Coding Region

25078823..25079494,25080190..25080401,25080814..25080999,25081579..25081600

Expression

GEO Profiles:Os05g0506400

Genome Context

<gbrowseImage1> name=NC_008398:25078823..25081600 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25078823..25081600 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcgacgacgacgacgatgaaatcaatgcaaaatacgacgagtgcaacgcggaagttgaggaatgcatgagaaaaactgaagagctgaactctgcactgcccgaggaggaacactactactgtgtccagttcctacctcgctctcttccggaaccactcttctataccgttcaccgcatgtactttatgcatgacaccaatccaacttctctaggtaacaaattatacacgaaccttgaggacagagactacccgatcactatgatccagattttttcaatgcggtttgccggcgacggcgtccaacttgatcagtcgatgagggtttacgggtttgtggcgatccatgatgaactggattgccgaaggaattacgtcttcaaccgctctagggacgacccctgcgacatcacaccggtttgccctacactgcctttgatctctcctgcacgaggaacatccataattgacggcgtgctacttgagtacagcttgaaagccaagcgcggtggcggcggcgacggcgacggcaacgacgtggagctcatcgacggctgcatcgagttcacttcgccgtctaccatgccggtcggcgagaaactgaagacgcgaatctacggccgggcggcgcccggcggcggcggcgcggcggtggccgtggacatggcgtacgccttcatcgagcgcggcgtggaggcgacggtggaggtcgaggttcgcggcgcgccgccgccatcaccgggtcacgggcgccgtcgtctcaacgccgccgcgctgacgagcgggtacgaggacgagatcgtcctcttcgatggaccactctcctcctccccttcttcttcgtcgtcgtcgtcgttgtcgtcgccggcgaaactggcattctctgccgtggtggccgtcgctcaggatgacgagttgagccttcgtctcgaagctgtcaccggcggcgagggtggcctatccatggccgtttctcggagctatctgtcgtttgaagcgcagaagcatgggagcagcctagccgagctggtgatggcgaaagacttggagctagttgtacgtgtcacctggtcaacaatgggcttataa</cdnaseq>

Protein Sequence

<aaseq>MIDDDDDEINAKYDECNAEVEECMRKTEELNSALPEEEHYYCVQ FLPRSLPEPLFYTVHRMYFMHDTNPTSLGNKLYTNLEDRDYPITMIQIFSMRFAGDGV QLDQSMRVYGFVAIHDELDCRRNYVFNRSRDDPCDITPVCPTLPLISPARGTSIIDGV LLEYSLKAKRGGGGDGDGNDVELIDGCIEFTSPSTMPVGEKLKTRIYGRAAPGGGGAA VAVDMAYAFIERGVEATVEVEVRGAPPPSPGHGRRRLNAAALTSGYEDEIVLFDGPLS SSPSSSSSSSLSSPAKLAFSAVVAVAQDDELSLRLEAVTGGEGGLSMAVSRSYLSFEA QKHGSSLAELVMAKDLELVVRVTWSTMGL</aaseq>

Gene Sequence

<dnaseqindica>2107..2778#1200..1411#602..787#1..22#atgatcgacgacgacgacgatggttggtgtggcctatctacttcatcatttctgtttcttctcttgattcttatcaaactttgcggcttttttttttcaaaaagcacttaacctcctaaacaatttctcggttcattttagacctcaaatggttggaaatggttcaacttactctcctacggtgtttgtcttttttgtttccctcttggttggttatatttttgcaatgaaattttgtgggattgatatatgcattataacttatctctaaacttttttggaattttttaatcgttgtttacataggtttggaagcgcttggactaatttaaacatagaggcttcaaatttcaagtgaatagtcatgaaaattttttaaactattttagaactttgataatagtatcatatacggctttaaaatattgactcgaataaatagaaacaatgaagagaaatgtaatttaccaattaagtgaagcatttttaatagtttaggaaataaaatgaatcgaaaaatatttaggggctaagtgcttcaatgaaatagtacgggacagtaaattgaacttttttttttctcttcacgatcgaactacagaaatcaatgcaaaatacgacgagtgcaacgcggaagttgaggaatgcatgagaaaaactgaagagctgaactctgcactgcccgaggaggaacactactactgtgtccagttcctacctcgctctcttccggaaccactcttctataccgttcaccgcatgtactttatgcatgacaccaatccaagtaagatttttttttctttttcatgggtatttaaattatttttgttcagagttcaattataacaactgtagttttaattgttcatctatttttcctttttgcaaaaaccaccaccccgtttctagcttacatacttcctccgtccaaaaaaaaacttaatatcatactagaataatactagaatatgacatattctagtacaacaaatccaaacatatatactctatgtccagattcgttatactagaatatgtaacaaatccgaacatatatactctatgtacagattcgttatactagaatgtgtagtatgaggttagtttttttttaacggaggtagtagcattattcatgagatgatgatgatgatcgaaaccatgatgaatacttgggttcaattttgttttctcagcttctctaggtaacaaattatacacgaaccttgaggacagagactacccgatcactatgatccagattttttcaatgcggtttgccggcgacggcgtccaacttgatcagtcgatgagggtttacgggtttgtggcgatccatgatgaactggattgccgaaggaattacgtcttcaaccgctctagggacgacccctgcgacatcacaccggtaagtggattataaaaaaaaaagtacacaatttatatttgtagacaggggcggaggcaagatttcactaagagtagagccgaagctatgctgtttcaaaattttcactgagtttctatttaaattttggtattttgccattgaaattctttgccacgtgtggggcccaagcccaagctgtcccacacatggctccgcccctttttagagaaaaaacacaaaaatttgtagtcggaagaaaatttgatatactatctccatttcatattataatactactagagaatggttttttttgacagcccctcatcgtcacctaaagccctaaagctgtcacaaagagcaaattgtttaattttttcttaaagttctttaggtttgatcaaatttatagaaaaagttagcaacatctaccacactaaatacaccaaattagtttcactaaatttaacattaaatatattttgatacaaaatttgttttaaaaaatattactatatttttctataaatttggttgaagtttgactaataaaaagtcaaacgtgataatatgaacagagggagtataactgttagggctaggcaagacctaatagtattttatcttaaagaaagataatttgactttccaacaaactttattccggctatttgcttggtaattaaagttgctactattgcatcgaaatgcaggtttgccctacactgcctttgatctctcctgcacgaggaacatccataattgacggcgtgctacttgagtacagcttgaaagccaagcgcggtggcggcggcgacggcgacggcaacgacgtggagctcatcgacggctgcatcgagttcacttcgccgtctaccatgccggtcggcgagaaactgaagacgcgaatctacggccgggcggcgcccggcggcggcggcgcggcggtggccgtggacatggcgtacgccttcatcgagcgcggcgtggaggcgacggtggaggtcgaggttcgcggcgcgccgccgccatcaccgggtcacgggcgccgtcgtctcaacgccgccgcgctgacgagcgggtacgaggacgagatcgtcctcttcgatggaccactctcctcctccccttcttcttcgtcgtcgtcgtcgttgtcgtcgccggcgaaactggcattctctgccgtggtggccgtcgctcaggatgacgagttgagccttcgtctcgaagctgtcaccggcggcgagggtggcctatccatggccgtttctcggagctatctgtcgtttgaagcgcagaagcatgggagcagcctagccgagctggtgatggcgaaagacttggagctagttgtacgtgtcacctggtcaacaatgggcttataa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0506400, RefSeq:Os05g0506400