Os05g0508800

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Revision as of 10:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0508800| Description = Conserved hypothetical protein| Version = NM_001062533.1 GI:115464796 GeneID:4339269| Length = 4790 bp| Definition ...")
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Gene Name

Os05g0508800

Description

Conserved hypothetical protein

Version

NM_001062533.1 GI:115464796 GeneID:4339269

Length

4790 bp

Definition

Oryza sativa Japonica Group Os05g0508800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25249493..25254282

Sequence Coding Region

25249910..25250000,25250649..25250872,25250980..25251041,25251766..25251987,25252287..25252416
,25252920..25253245,25253457..25253598,25253716..25253961

Expression

GEO Profiles:Os05g0508800

Genome Context

<gbrowseImage1> name=NC_008398:25249493..25254282 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25249493..25254282 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggagtacgggcccgcggcggcgccgcggctgctggtgtccgactccggccgcgtccatgagatggagaggttctcgcattacgtcgctaggcaaattgggtttgaccatgtggatgaatgcccccacctatgtacgctggcctatgattatctgaggaagaacaagggttacgaagaaaacatattcgcgttcttccaaaacagccaggatcccgagactctgattgtaaagttcatcgaggaactcgacaaatgtatacttggctacttctcattccattggaactatgcaacctatataatttcccaggttttgactgtagaaggtgctcctaaaagaaagctcaggaacatggtattagaggccactaggaaacagagatttgaaagggttacaagaaacttgaaggtgaccagactattctccacattggtggaggagctgaaggccataggactatcttcccatgttgaagcaccacggagtgatgtgatggtcccagcagcacattgtgatcgcagcccagttctactcttgatgggtggtgggatgggagctggcaagagcaccgtgcttaaggatatactcaaggaagcattctggtccggagcagctgcaaatgcagtagttgtagaggcagatgcattcaaggaaactgatgtaatctatcgagctatcagctcaagaggccaccacaatgacatgctgcagacggcagaactggtacatcagtcatcgatggacgcagcctcgtcgctcctggtgactgccctcaacgaagggagggatgtgatcatggacggcaccatgtcgtgggagccgtttgtccagcagacgatcaccatggccagggctgtgcaccggcaacggtaccgcatgggtgttggctacaaggtcacggaggacgggtcaatcactgaggagtactgggagccagttgaggactccagtacagatgaagaaggcgagacgagaaacaggaagccatatcgcatcgagctcgtaggtgtggtctgtgatgcctatcttgcggttgtcaggggaatcaggagagctgtgatcaccgggagagcagtgagggtgaagtcccagctgaagtcccacaagcggttcgccaccgcgttccacagctactgcaacctcgtcgacaatgcgaggctctactgcaccaactccacgggcgccgccaagctgataggatggaaggacggcgagagcaaccttctagtggaccctgaagaaatcggctgcttggagagggtgagccacctcaacgacgaggccgactgcgtccacgagatctatccggacggctcggcggcggcggcctgggaggccctggtcacgtcgccgtcgagggcgccggcgcagcgggagatcatggcggcggtccagaggagcgaggcgcgcttccggaccacgtccacgccctcgtag</cdnaseq>

Protein Sequence

<aaseq>MREYGPAAAPRLLVSDSGRVHEMERFSHYVARQIGFDHVDECPH LCTLAYDYLRKNKGYEENIFAFFQNSQDPETLIVKFIEELDKCILGYFSFHWNYATYI ISQVLTVEGAPKRKLRNMVLEATRKQRFERVTRNLKVTRLFSTLVEELKAIGLSSHVE APRSDVMVPAAHCDRSPVLLLMGGGMGAGKSTVLKDILKEAFWSGAAANAVVVEADAF KETDVIYRAISSRGHHNDMLQTAELVHQSSMDAASSLLVTALNEGRDVIMDGTMSWEP FVQQTITMARAVHRQRYRMGVGYKVTEDGSITEEYWEPVEDSSTDEEGETRNRKPYRI ELVGVVCDAYLAVVRGIRRAVITGRAVRVKSQLKSHKRFATAFHSYCNLVDNARLYCT NSTGAAKLIGWKDGESNLLVDPEEIGCLERVSHLNDEADCVHEIYPDGSAAAAWEALV TSPSRAPAQREIMAAVQRSEARFRTTSTPS</aaseq>

Gene Sequence

<dnaseqindica>418..508#1157..1380#1488..1549#2274..2495#2795..2924#3428..3753#3965..4106#4224..4469#gggtctagtagtcttctcttcttccacgcgcaggcgcagccatcgtcgtcatcgccatcgccgccgcggcgcgcgcgcgcgcgcccgtgactgacttccgtagggggggactgaggcacgccaccccgcgcgcgcgcgcgcgcgcgtgcggccgcacaaccacgaacgcgctccgaagtcttccttccgggagggcacgtgtggttggggtataaagggggagagaggcacgatgccgcacggcgtcgcgctcgtcgtcgtcgtcgtcgtcgctcctggccggtagcggatgggcgtcgtggtggggttgcagcttgctcgcctcgccctcgccctcgccgtcgccgtcgcccccgggttgctcagcttctccgccgccgccaccgcagcctgaagcgcgcgggcgtcgaaacgaggatgagggagtacgggcccgcggcggcgccgcggctgctggtgtccgactccggccgcgtccatgagatggagaggttctcgcattacgtcggtacgcaacctcgctctactactacttagtaccttcgatcgattactttgtaactttgcttaagcattcaatggatttttttttttgcggagcaatattgcttccgattgattgaatggattgctctccgatgcagtacattgacttgcaagaactcaattccatccacgattttcggaggggatcgcatgctccagcgttggaatgtgtgatttatgttttttcaccttgtcttctttgtcgatttcgtaagggaaattgcgctacaaccatttccttttagtttgttcatcactttgtccaatccaaaaatccaggatacagcgcggaattcgagtgtgcacagcacacgcatctagataggcatattattaatggggtggcgtggagattgattagcggcaacttgggcatagaaaattttgagggggtggaaatggaagcgagacattagattatgctttccactccatgaaacaccactagcgagattccaaacaatggcatattctatgtggtttgagttgtagcacatcatcacatattattcttttgtccctttatgatcttgggaccagcactggtttccccccaccttgtgtccttcttgccttttctgttttctcacaaatatgtggcaattttcagctaggcaaattgggtttgaccatgtggatgaatgcccccacctatgtacgctggcctatgattatctgaggaagaacaagggttacgaagaaaacatattcgcgttcttccaaaacagccaggatcccgagactctgattgtaaagttcatcgaggaactcgacaaatgtatacttggctacttctcattccattggaactatgcaacctatataatttcccaggtaaaggagttaggaccttttgccttatggctttgtcctctattgcttccttatgaaactctcctccactgatattttacgtattgatacagtggtgattttcacaggttttgactgtagaaggtgctcctaaaagaaagctcaggaacatggtattagaggccactaggtaattaatcatccttgagctacatgcttggtagttcaaaatatttaatgcacagtcattgcctaatctctgccttttttttatgccaagtattagttgctttagcttgcagcatcttcttgctttactgcagcacaagtttttcttacttgacttggatgtactattaatcaactcgtatgatctcttgtttggagttctttttgtacaaatatttttgtaggagtatcatatatttacagaatctctcctcatttaatgttgtgttggatctgtctccttgaagtgcttattggttgagttgaattatttattctattgactggttattttcttcctatctgatcaaacctttcactggatcaacttcagagctcaaaatggatattttagcagaaacagcacatttgaagtcaaagcaattagatttagatgataggcatgtgcttaggctaaactatggtttctttatttactcctatagccctatgtttggcctgccatgttcctttgaaaagtacattggtaattacttaagtgcctaaccggagaagttcaagtggagaaaatgcttatagtttcgatccaatatggtctcttatatcttgaaaaacatgtttataaccagttacaattcaatccctgtatttaagtagatgaactctgtttctctgacatcaaaactcaaaatgaggtctagcttctgactctccactaaatacaggaaacagagatttgaaagggttacaagaaacttgaaggtgaccagactattctccacattggtggaggagctgaaggccataggactatcttcccatgttgaagcaccacggagtgatgtgatggtcccagcagcacattgtgatcgcagcccagttctactcttgatgggtggtgggatgggagctggcaagagcaccgtgcttaaggatatactcaaggagtaagttgatcacttccatgctcgacattctgttcgtgttttgtttcatctcccttttcgtgtatgtttctcatcctgtggttcaatattttgttaaagctaaaaacattgatctgatctgccaaccagcaggttaatgaggaggagaataggtgaatgagaaatggcaagatgtaataatcaattaggaggagaaaaacattgcttggactttttaatcaaagccagagcagctaaagaatataaaatacgccttttcagaaagcttatcgtgctgctacctgtttcttgatctgcagagcattctggtccggagcagctgcaaatgcagtagttgtagaggcagatgcattcaaggaaactgatgtaatctatcgagctatcagctcaagaggccaccacaatgacatgctgcagacggcagaactggtatttgttagcagctgttactatactatatatgttaataccagtataccagtcagtgagtaaaacggcacatgaccactacatgacaacccaaaatgtacaattgcaattatttacattttagtgtcttggagatgctgtcccacctcctaaatctccacccctatattcatctttactatacattgaaacaagaaactcaatctcctactccctccgtcccaaaaaaaggcaaactctgggtttccgtgtctaacgttgactgtccgtcttatatgaaatttttttataattcgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtctttttaatttttttcataattttttcaaataagatggacggtcaaacgtttggcacggaaattaggatttgtctttttttgggacggagggagtatgtacatttcagacataccatggctcattgtcagtgacccctcgattccggtgcaggtacatcagtcatcgatggacgcagcctcgtcgctcctggtgactgccctcaacgaagggagggatgtgatcatggacggcaccatgtcgtgggagccgtttgtccagcagacgatcaccatggccagggctgtgcaccggcaacggtaccgcatgggtgttggctacaaggtcacggaggacgggtcaatcactgaggagtactgggagccagttgaggactccagtacagatgaagaaggcgagacgagaaacaggaagccatatcgcatcgagctcgtaggtgtggtctgtgatgcctatcttgcggttgtcaggggaatcaggtatgcttcagaacttaatcctactccactacatgtctacattactgatactatgcttgttcatattactcaaacaaattctgcttgatcttgcctgtttctgctcacgcttccattatgtcagcattgcgattgactcaactgcactattttccgtgtactaacaaagaggtataagcacaaaatttgacacggttaatcacattgtcaggagagctgtgatcaccgggagagcagtgagggtgaagtcccagctgaagtcccacaagcggttcgccaccgcgttccacagctactgcaacctcgtcgacaatgcgaggctctactgcaccaactccacgggcgccgccaaggtgagcttaccaatgcattccgtgttcggttaccgatgttgttatcggggccggttttataacatcaggcacattgagaaatgagaattcaccatcgctcgctggctctctctacagctgataggatggaaggacggcgagagcaaccttctagtggaccctgaagaaatcggctgcttggagagggtgagccacctcaacgacgaggccgactgcgtccacgagatctatccggacggctcggcggcggcggcctgggaggccctggtcacgtcgccgtcgagggcgccggcgcagcgggagatcatggcggcggtccagaggagcgaggcgcgcttccggaccacgtccacgccctcgtagctgcagcacacgatcactcgtgtcaggttggaattttcttttcttttgacacgatttcaggtaggattgggggtatttgggtgttggttgtgtgtggtggctgccaaatggctcgtgggacacagttcgtgttatgtacgtatcatactgtacattgtatcaactgatcctgactccgttaccacccggcatattgtttcgttttgccgggcgatcgagctgcatcgaatggagctcgtcggagtcatcggtcatgtacacatgtgtcttgtacgatgtattccggatctagacaagaaacaacacatacttttcatggtc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0508800, RefSeq:Os05g0508800