Os05g0525900

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Revision as of 10:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0525900| Description = Similar to Zing finger transcription factor PEI1| Version = NM_001062634.1 GI:115464998 GeneID:4339379| Length = 124...")
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Gene Name

Os05g0525900

Description

Similar to Zing finger transcription factor PEI1

Version

NM_001062634.1 GI:115464998 GeneID:4339379

Length

1247 bp

Definition

Oryza sativa Japonica Group Os05g0525900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26232343..26233589

Sequence Coding Region

26232740..26233507

Expression

GEO Profiles:Os05g0525900

Genome Context

<gbrowseImage1> name=NC_008398:26232343..26233589 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26232343..26233589 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagccgagagcacctcctgctcgacccggcggcgctggccgtctcttgggctgaccccgctgcggtggagatcccgcccgagctcctcgccgcgctgggtgagtacctgtccgccaggcgtagcgacggggaggccgaggccgacgccgaggcggaggctgatgatgagttcatgatgtacgagttcaaggtgcggcggtgcgcgcgggcgcggagccacgactggacggcgtgcccgtacgcgcaccctggcgaggccgcgaggcggcgtgacccgaggcgcgtggcgtacacgggcgagccgtgcccggacttccgccgccggccgggcgccgcgtgcccgaggggcagcacgtgcccgttcgcgcacggcacgttcgagctctggctccacccgtcgcgctaccgcacgcggccgtgccgcgcgggcgtcgcgtgccgccgccgcgtctgcttcttcgcgcacaccgccggcgagctccgcgccgggtccaaggaagactcgccgctgtcgctctcccccaagtcgaccctggcctccctctgggagtcgccgccggtgtcgccggtggaggggcggaggtgggtggacggcatcgatgaatgcgacgcggacgcggagatggaagagttgatgttcgcaatgcgggagctcggcctccggaaggtgaggccgtcggcatcgtccgtaacgccggtgctaccgccggtgacggacgaggacgggccggatttcgggtgggtgtccgagcttgtgatgtag</cdnaseq>

Protein Sequence

<aaseq>MASREHLLLDPAALAVSWADPAAVEIPPELLAALGEYLSARRSD GEAEADAEAEADDEFMMYEFKVRRCARARSHDWTACPYAHPGEAARRRDPRRVAYTGE PCPDFRRRPGAACPRGSTCPFAHGTFELWLHPSRYRTRPCRAGVACRRRVCFFAHTAG ELRAGSKEDSPLSLSPKSTLASLWESPPVSPVEGRRWVDGIDECDADAEMEELMFAMR ELGLRKVRPSASSVTPVLPPVTDEDGPDFGWVSELVM</aaseq>

Gene Sequence

<dnaseqindica>83..850#acctcaaagtacagtttcctcttttttttttcttcggtggtgttgggagtggacaaggtagtgtgagtgagtagtgagcaccatggcgagccgagagcacctcctgctcgacccggcggcgctggccgtctcttgggctgaccccgctgcggtggagatcccgcccgagctcctcgccgcgctgggtgagtacctgtccgccaggcgtagcgacggggaggccgaggccgacgccgaggcggaggctgatgatgagttcatgatgtacgagttcaaggtgcggcggtgcgcgcgggcgcggagccacgactggacggcgtgcccgtacgcgcaccctggcgaggccgcgaggcggcgtgacccgaggcgcgtggcgtacacgggcgagccgtgcccggacttccgccgccggccgggcgccgcgtgcccgaggggcagcacgtgcccgttcgcgcacggcacgttcgagctctggctccacccgtcgcgctaccgcacgcggccgtgccgcgcgggcgtcgcgtgccgccgccgcgtctgcttcttcgcgcacaccgccggcgagctccgcgccgggtccaaggaagactcgccgctgtcgctctcccccaagtcgaccctggcctccctctgggagtcgccgccggtgtcgccggtggaggggcggaggtgggtggacggcatcgatgaatgcgacgcggacgcggagatggaagagttgatgttcgcaatgcgggagctcggcctccggaaggtgaggccgtcggcatcgtccgtaacgccggtgctaccgccggtgacggacgaggacgggccggatttcgggtgggtgtccgagcttgtgatgtagaagcacccgacaagctcaaagacatcatctctctcggcggcgacgattaagatgcagaggcgcctcgcagaacagcttcattaattaagttcacttcaattcgatgatcatttcgcaaattgcatcattcttctgtacataaacaaatatggtgcaagttaatctgaacacagcaatccgtaactgtaagtgtggcgtgcgtttgcctgcctttttttttcgaaaatcttggggagctagtagcacccttgcttttcgattattattattattatctaccagtgtagatatggagtgtaatatgctaatagcctctgcctgtttcgtgatattatcacatttgatgtacttaattatgctaaattcgatgcttttttttatctatcttcctgtggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0525900, RefSeq:Os05g0525900