Os05g0526200

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Revision as of 10:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0526200| Description = Conserved hypothetical protein| Version = NM_001062635.1 GI:115465000 GeneID:4339380| Length = 1456 bp| Definition ...")
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Gene Name

Os05g0526200

Description

Conserved hypothetical protein

Version

NM_001062635.1 GI:115465000 GeneID:4339380

Length

1456 bp

Definition

Oryza sativa Japonica Group Os05g0526200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26236830..26238285

Sequence Coding Region

26236862..26237191,26237317..26237481,26237598..26237918

Expression

GEO Profiles:Os05g0526200

Genome Context

<gbrowseImage1> name=NC_008398:26236830..26238285 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26236830..26238285 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggacgttacccgtcgcccacaggttctcgctcgcctcggccttcctgccgcgccaccgccggccatcgccgtccgcccccaaccggcgccggcggcatggaacggtggtggcgtacatggagccgaaccccaactcgccgtcctccatcgcgggccgcctcatcggggctctccccgtggtgggcctcgtggcgcgcatcctgagcgacgagggtggcgtcggcggcgacatgatcgacttcgccgagttccgccgccgcgtcagcaagaagtgcaccgtcatggactcccaggccttctacgatttcaacgaacgccgcggcaaggcaggagatcccttctacgttctgctgtgctgctggctggccgccgttggtggcgggctgctgaaaacggaggagatcttggaaggcgtcgcgcggctccgcctctccaacgacatcgagttcgaggaggagacgttcctcgacatgatgaagacggcaaaggagaaaagagcaaagctgaaggctccggcgccacagataccaatggaagcgcgggcggagaaggccctggaggccatctacgtgtgctgcttcgggcaggacatggtggaagacgtggacgtgaagctgctgtgcaaaatgctgaacgccgtcttcccctccgtcgggaggcaggcggtcgagaggatagtgacctccatggcgaagcaggtggctgccggcgagaggaagggccccggcgtcaagaccgtgtccaaggaagcagcgcagcggcaactcaaggacctggaatttctcaagcagaacaagttggattcggcatga</cdnaseq>

Protein Sequence

<aaseq>MGTLPVAHRFSLASAFLPRHRRPSPSAPNRRRRHGTVVAYMEPN PNSPSSIAGRLIGALPVVGLVARILSDEGGVGGDMIDFAEFRRRVSKKCTVMDSQAFY DFNERRGKAGDPFYVLLCCWLAAVGGGLLKTEEILEGVARLRLSNDIEFEEETFLDMM KTAKEKRAKLKAPAPQIPMEARAEKALEAIYVCCFGQDMVEDVDVKLLCKMLNAVFPS VGRQAVERIVTSMAKQVAAGERKGPGVKTVSKEAAQRQLKDLEFLKQNKLDSA</aaseq>

Gene Sequence

<dnaseqindica>33..362#488..652#769..1089#agataaggcgcgcgccacgtccaccacacacaatggggacgttacccgtcgcccacaggttctcgctcgcctcggccttcctgccgcgccaccgccggccatcgccgtccgcccccaaccggcgccggcggcatggaacggtggtggcgtacatggagccgaaccccaactcgccgtcctccatcgcgggccgcctcatcggggctctccccgtggtgggcctcgtggcgcgcatcctgagcgacgagggtggcgtcggcggcgacatgatcgacttcgccgagttccgccgccgcgtcagcaagaagtgcaccgtcatggactcccaggccttctacgatttcaacgaacgccgcggcaaggtacccgtcgctcctctcgccgtcgatttcttcttctcaatgccaaaaatgatgcaaaaccaagcagaaatgccaaaaatgttcttttaattgatttggtgagcatatgttccgttgtttgacaggcaggagatcccttctacgttctgctgtgctgctggctggccgccgttggtggcgggctgctgaaaacggaggagatcttggaaggcgtcgcgcggctccgcctctccaacgacatcgagttcgaggaggagacgttcctcgacatgatgaagacggcaaaggaggtagccatgcttaattcagcaacttttctggaagaacatgtccctgcactgcaaatttgaatgcatactatatgtcctataaattggtccctaagagaagatgaattttattgcagaaaagagcaaagctgaaggctccggcgccacagataccaatggaagcgcgggcggagaaggccctggaggccatctacgtgtgctgcttcgggcaggacatggtggaagacgtggacgtgaagctgctgtgcaaaatgctgaacgccgtcttcccctccgtcgggaggcaggcggtcgagaggatagtgacctccatggcgaagcaggtggctgccggcgagaggaagggccccggcgtcaagaccgtgtccaaggaagcagcgcagcggcaactcaaggacctggaatttctcaagcagaacaagttggattcggcatgagcattgtgcagaacacattgggaaattttgtcagatagacgtcgtttttaggccaagaaacagaaattgcatggcttacttggccgtgtttgtcatagaccgagttttctcctaagatgtgctaggaaggtcagctatcgtagggaaatagaaatcagcatagattgcaagtttgcgacacagttgacgcaggccaaacaatggtctcggttcattagaattgcaatgtgagtgagctcagaaccttgtaagatgaagttgtacgttgtgacatgctcagaaaatgtctactgctacagtactttttaatgctacatgtgtttactaagaataaaaatgtaacagacgtggcatcgtttaagatggc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0526200, RefSeq:Os05g0526200