Os05g0526700

From RiceWiki
Revision as of 10:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0526700| Description = Harpin-induced 1 domain containing protein| Version = NM_001062639.1 GI:115465008 GeneID:4339385| Length = 971 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0526700

Description

Harpin-induced 1 domain containing protein

Version

NM_001062639.1 GI:115465008 GeneID:4339385

Length

971 bp

Definition

Oryza sativa Japonica Group Os05g0526700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26250892..26251862

Sequence Coding Region

26251075..26251836

Expression

GEO Profiles:Os05g0526700

Genome Context

<gbrowseImage1> name=NC_008398:26250892..26251862 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26250892..26251862 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacggcggcggagaacaagaacgagccggcgcggccattcgcggtgccatccccgtcggtccacccggcggcgaccggcgtgggggaggaggaggaggcgcaggcggcgacggggtggcggtccatgcagtacctccggaagcggcggcgcgcgctctgctgctgcggctgctgcgtgaccaccctggtcgtcgtcggcctcgtcatcctcgtcctcgcgctcaccgtgttcagggtgaaggacccccgcatcaccatgaacggcgtgtgggtgacggccatcagcaccggccccggcaccggcgccggcatcgggagcaccgtggcgaccaacgcgacgctcaccgccgacgtctcggtcaagaaccccaacgccgcgtcgctccggttctcccggagcgagacggacgtgtactacaaggggaagacggtgagcgtggcgtacgtccccgccggcagcgtcggcgccgaccggacggtgcggatgaacatcacgctcgacctgctcgccgaccgcctcgcgtcggtgctcaacggcacggggctgatactcgggcaggagtacgacctgaccacctacacggcgatgagggcgagggtcagcgtgctggggatcatcaagaagagcctcgacgttcggatgaactgctcggtcatcttggacgtcgccggcatcgccggcgtgctgctgcccggggacggggccaagtcgggcgtgcagactaggagcgtggattgcgttgcaatcgtgagctga</cdnaseq>

Protein Sequence

<aaseq>MATAAENKNEPARPFAVPSPSVHPAATGVGEEEEAQAATGWRSM QYLRKRRRALCCCGCCVTTLVVVGLVILVLALTVFRVKDPRITMNGVWVTAISTGPGT GAGIGSTVATNATLTADVSVKNPNAASLRFSRSETDVYYKGKTVSVAYVPAGSVGADR TVRMNITLDLLADRLASVLNGTGLILGQEYDLTTYTAMRARVSVLGIIKKSLDVRMNC SVILDVAGIAGVLLPGDGAKSGVQTRSVDCVAIVS</aaseq>

Gene Sequence

<dnaseqindica>27..788#gctatagctagctagctccagctcccatggcgacggcggcggagaacaagaacgagccggcgcggccattcgcggtgccatccccgtcggtccacccggcggcgaccggcgtgggggaggaggaggaggcgcaggcggcgacggggtggcggtccatgcagtacctccggaagcggcggcgcgcgctctgctgctgcggctgctgcgtgaccaccctggtcgtcgtcggcctcgtcatcctcgtcctcgcgctcaccgtgttcagggtgaaggacccccgcatcaccatgaacggcgtgtgggtgacggccatcagcaccggccccggcaccggcgccggcatcgggagcaccgtggcgaccaacgcgacgctcaccgccgacgtctcggtcaagaaccccaacgccgcgtcgctccggttctcccggagcgagacggacgtgtactacaaggggaagacggtgagcgtggcgtacgtccccgccggcagcgtcggcgccgaccggacggtgcggatgaacatcacgctcgacctgctcgccgaccgcctcgcgtcggtgctcaacggcacggggctgatactcgggcaggagtacgacctgaccacctacacggcgatgagggcgagggtcagcgtgctggggatcatcaagaagagcctcgacgttcggatgaactgctcggtcatcttggacgtcgccggcatcgccggcgtgctgctgcccggggacggggccaagtcgggcgtgcagactaggagcgtggattgcgttgcaatcgtgagctgatcagcggttttcttgtgtgagtactgcattgtcattacagcacctcattacatatgaatatgtatttttctggatgtatattctgctactctcgtatgtatgtttttctggatatatattatgctactttcgtgtgttcacagatcgaattctctctaggaaataatacccaatagcattatt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0526700, RefSeq:Os05g0526700