Os05g0541200

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Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0541200| Description = Conserved hypothetical protein 730 family protein| Version = NM_001062722.1 GI:115465174 GeneID:4339472| Length = 20...")
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Gene Name

Os05g0541200

Description

Conserved hypothetical protein 730 family protein

Version

NM_001062722.1 GI:115465174 GeneID:4339472

Length

2018 bp

Definition

Oryza sativa Japonica Group Os05g0541200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26929643..26931660

Sequence Coding Region

26929705..26929836,26929992..26930089,26930257..26930287,26930827..26930926,26931055..26931125
,26931240..26931383,26931465..26931560

Expression

GEO Profiles:Os05g0541200

Genome Context

<gbrowseImage1> name=NC_008398:26929643..26931660 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26929643..26931660 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagacggagcggaggcggcgggggcgaccgcggcgagcaggttcgggacgatctgcgtcttctgcggcagcaacgcggggcgccgcagggtgttcggcgacgcggcgctcgacctcggccacgagctggtgaggcggggcgtcgatctggtctacggcggcggcagcatcgggctgatgggcttgatcgcgcgtacggttctcgacggcggccgccgtgtcgtcggggtgattcctagagctctcatggctgtcgagatatcaggtgagagtgtgggagaagtaatagttgtacaggacatgcatgagcggaaagcggagatggctcggcgatccaaagcgttcattgctcttcctgggggctatggaacaatggaggagctgttagagatgataacatggtgccaacttggaattcatgacaagccagttggattgctaaatgttgacggttactacgatccactgctcgcgttgttcgacaaaggcgaggcggagggcttcatcaactctgattgtagacaaatatttgtatctgcaccaactgcaagtgaattgctgacaaagatggagcaatacactcggttgcaccaggaggtggcccctgcaacaagctgggagatctcagagcttggctatggaagaacaccgggcgctgatcaatcctag</cdnaseq>

Protein Sequence

<aaseq>MGDGAEAAGATAASRFGTICVFCGSNAGRRRVFGDAALDLGHEL VRRGVDLVYGGGSIGLMGLIARTVLDGGRRVVGVIPRALMAVEISGESVGEVIVVQDM HERKAEMARRSKAFIALPGGYGTMEELLEMITWCQLGIHDKPVGLLNVDGYYDPLLAL FDKGEAEGFINSDCRQIFVSAPTASELLTKMEQYTRLHQEVAPATSWEISELGYGRTP GADQS</aaseq>

Gene Sequence

<dnaseqindica>63..194#350..447#615..645#1185..1284#1413..1483#1598..1741#1823..1918#aggaggaggaggagatagagtgaggccgtgacggcgacggcgaggtctgggggcggggcgcgatgggagacggagcggaggcggcgggggcgaccgcggcgagcaggttcgggacgatctgcgtcttctgcggcagcaacgcggggcgccgcagggtgttcggcgacgcggcgctcgacctcggccacgagctggtacgcgtagataacgggcgggcgcgtggcgcggcgacggtcgagctgtctcgctcgccgccgccgccgccgccatcgtacttttccatccttggtttcacactttttttttcaggtgcgagccgtgagattcttctcctttttttgtttttcaggtgaggcggggcgtcgatctggtctacggcggcggcagcatcgggctgatgggcttgatcgcgcgtacggttctcgacggcggccgccgtgtcgtcgggtacgtacgcacgcagccagcttcgtttctgcgcctgagagcgatttcctcattacttttgctgccttgctttcgcggctgcacctgcggatgcctgtgattctcgtgtacgtgctacaccaccatctaatgcggcgtgataaaatttttgcttgatttattcgcagggtgattcctagagctctcatggctgtcgaggtctgcaatctcttcgacttcctttcagtatttcgtagatttttcagggttcagaagtgtcgttgaattcagctctgtattggtatgttttagcgtttgccatgttgtgttcttacttggagaacttgccgttggaatcctgtggtgtttggatcagaattccacatttgaaatgaaccctaaagtctaaacgaaatgatcaagctagacagggctaggatttccgaaagtttggtttctgtccatttttaggtggcaggtacaagccgtatagcagcatacttcaattcattgttagttttcagctgaattaaatagtaggaccagtacacttgctatcttgaatttgtcagggtgatgtttatcttgaatatgtcagggtgaagttacctgatcctaacataattgataatagtacgtgtatgcgatcatttaaaagagatgttttactttgacttggaaggactgtacagctttgtgaagaattttgtaaagggagtggtttgtgttgacatttgcaaatattgcttttctaacagatatcaggtgagagtgtgggagaagtaatagttgtacaggacatgcatgagcggaaagcggagatggctcggcgatccaaagcgttcattgctcttcctggtaattgataattccaatatatgtgagatggactgacgatctgaaatgttcagtaccttctttctaacatcatctatcacactagtaattgataattcaaatgtaacttggttattgatttttatcagggggctatggaacaatggaggagctgttagagatgataacatggtgccaacttggaattcatgacaagccagtaagcataattgagatatttgatactagatatattgtaaacggcaaagtagcataatgctttgttgatggattaaggtctccatcacatataaaaccttggccaattgaacaggttggattgctaaatgttgacggttactacgatccactgctcgcgttgttcgacaaaggcgaggcggagggcttcatcaactctgattgtagacaaatatttgtatctgcaccaactgcaagtgaattgctgacaaagatggaggtaatttgactgacctatgaactctgatgtgagcatttgcaaagcctgagcgacttttttcatgcccccatttggactcagcaatacactcggttgcaccaggaggtggcccctgcaacaagctgggagatctcagagcttggctatggaagaacaccgggcgctgatcaatcctagcccccctcacttcaaaagtgactagtacaagctctactaatgcctttgcttttgttttcccttgcttcttgtgatcaagtgtcaaattaaactcctcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0541200, RefSeq:Os05g0541200