Os05g0541500

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Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0541500| Description = Cyclin-like F-box domain containing protein| Version = NM_001062723.1 GI:115465176 GeneID:4339473| Length = 2377 bp|...")
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Gene Name

Os05g0541500

Description

Cyclin-like F-box domain containing protein

Version

NM_001062723.1 GI:115465176 GeneID:4339473

Length

2377 bp

Definition

Oryza sativa Japonica Group Os05g0541500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26946199..26948575

Sequence Coding Region

26946430..26947371

Expression

GEO Profiles:Os05g0541500

Genome Context

<gbrowseImage1> name=NC_008398:26946199..26948575 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26946199..26948575 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctatctagtcgcggccgcggggacgccattgcgatctcagggcatcagatgcgcgcgccaaaccccacgccgccgcgcgactccgccatggctaggaggaggaaaggttcgtcctatcgccgccgccgccgccgccgccggcgggcgcccgcggcttgcggcgacaaccgcatcgacgacctgacggacgatctgctgctgatcatcctgcggaggctcgacacccgctccgcgctcgccaccgcggcgctctccaggcgctggtccggcctcgcgcgcgcgggcctcgaggctctcgatttcatggtcggcgacatcctcccgccgcgctaccaccggtgcatccagctccacgagtccgccagtggtgtgttcgatggcgccgacgagctcagaaccatcgttgctagcatcaggcggcacgagcgcctcgccatgcgaaacatggtcgcctccatcaacaacttcctcgacgccgatgatggttttgcccatggcgacggcggcggcggagctccacggaggaggatcagtaggctgcgggtggagttcatcgccacacactaccacgactgcatcaaccgcttggtcgccaaggctgttgatacttggggagttgaggatctagaggttcttggtaggacaacgtattggcggcatcattttcaggatgcccacatcttccgtcgccatggtctctgcaatgacccgcacagatcccgtttgcgaagcctgaagctggtggactgtgtgattcccccattgcaggggttccaagctctcaccaagctggtcctgcaagacttgcgggactccacacccgcggcagcctacgaagcagtgtgttcagctcatgcctacagttgcaagaggtgcacctcaagtcctgcccctgcaagcgcggcagtagtgttttcgttgatgcccccaggtcaatga</cdnaseq>

Protein Sequence

<aaseq>MLSSRGRGDAIAISGHQMRAPNPTPPRDSAMARRRKGSSYRRRR RRRRRAPAACGDNRIDDLTDDLLLIILRRLDTRSALATAALSRRWSGLARAGLEALDF MVGDILPPRYHRCIQLHESASGVFDGADELRTIVASIRRHERLAMRNMVASINNFLDA DDGFAHGDGGGGAPRRRISRLRVEFIATHYHDCINRLVAKAVDTWGVEDLEVLGRTTY WRHHFQDAHIFRRHGLCNDPHRSRLRSLKLVDCVIPPLQGFQALTKLVLQDLRDSTPA AAYEAVCSAHAYSCKRCTSSPAPASAAVVFSLMPPGQ</aaseq>

Gene Sequence

<dnaseqindica>232..1173#accggcgccggagccggccgctggatccgccaaaccaccggcgccagagcctcggcggcctcgcttcctatcttcctcctcccatggctccactggattccggcggcgtcaccgcctcatcgcccctcccccccgatccccaaagccacccgtcgaatcgagtccgaatagtatgagcagctgcggcctcggtgcgattccggttcggattccagctgcggcccgcggcggatgctatctagtcgcggccgcggggacgccattgcgatctcagggcatcagatgcgcgcgccaaaccccacgccgccgcgcgactccgccatggctaggaggaggaaaggttcgtcctatcgccgccgccgccgccgccgccggcgggcgcccgcggcttgcggcgacaaccgcatcgacgacctgacggacgatctgctgctgatcatcctgcggaggctcgacacccgctccgcgctcgccaccgcggcgctctccaggcgctggtccggcctcgcgcgcgcgggcctcgaggctctcgatttcatggtcggcgacatcctcccgccgcgctaccaccggtgcatccagctccacgagtccgccagtggtgtgttcgatggcgccgacgagctcagaaccatcgttgctagcatcaggcggcacgagcgcctcgccatgcgaaacatggtcgcctccatcaacaacttcctcgacgccgatgatggttttgcccatggcgacggcggcggcggagctccacggaggaggatcagtaggctgcgggtggagttcatcgccacacactaccacgactgcatcaaccgcttggtcgccaaggctgttgatacttggggagttgaggatctagaggttcttggtaggacaacgtattggcggcatcattttcaggatgcccacatcttccgtcgccatggtctctgcaatgacccgcacagatcccgtttgcgaagcctgaagctggtggactgtgtgattcccccattgcaggggttccaagctctcaccaagctggtcctgcaagacttgcgggactccacacccgcggcagcctacgaagcagtgtgttcagctcatgcctacagttgcaagaggtgcacctcaagtcctgcccctgcaagcgcggcagtagtgttttcgttgatgcccccaggtcaatgatcaggcagcttgttctggagtgttgtggcgtccctgggtttgagctgcacgctctgccaatgcttgagagtatagttgtcatgcagacctgggtacggtacaagcttggatccttcccgcgcctcgtgcgcctgaacctcaaacgcgatggtctcaggcataaacttaacttttgcttgcctgcgaacttggatctcaagccgcatcttggattcactccagacataactgaccaggttatacgattcaccggatatgaaagatggtttcggccttcgtgcccttcgttgctgttaccaaagcttaccaggcttctgattgccgatgtgccttcatcatgggatatctcttggccccgactcctcctagaagcagcgccatgtctggagagccttcatatccatattaccccttgggaaggagagacttgcaatgatattttgtggcagccatccaagttgcagcacaaacggctaaaggagttggtgatcattggttttgaaggaacagagagacagatttactttgttaactttgtcattgaagtgtcaatggtactggagcttgtttccttgagtatggccgtgttcaggaaataggttactgggactggaacattgtgaggcaacaacaccgttggtgtgatgaggagagagcaaaaatactggatcagcttgctgataaaatttcttgctcagcaactccagttcaagtatttcttgagtgatctctcatgttttgtatccaaagcttaagttatcagacctagtaacctcaggaggcttttgaccgctgctgtgtctttttaccatggatgcctagagagtctcttgaatccatattgcccccttgaagttggcatgctcagctaatagagttgatgatagtaggatctgagggaacagaaagactgttttagtttgttaattttgtagtagaagtatcgatggtactgtagcttgttgctttgttaaaaagtgagcatgtatacatggttcatagagcctgggagatgactactgatgcagcaataccagatttctgatagaatttagtgctcaattactctaattcaagtagttttgggaaagccttctcatctatactttgttagttacatgtgaaagatgtcgaaaagcgactgtatattacatgcatgatgtggatatagttttgcctttaataaattgaaatgttgcgactg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0541500, RefSeq:Os05g0541500