Os05g0542300

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Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0542300| Description = Conserved hypothetical protein| Version = NM_001187580.1 GI:297724290 GeneID:9268161| Length = 1148 bp| Definition ...")
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Gene Name

Os05g0542300

Description

Conserved hypothetical protein

Version

NM_001187580.1 GI:297724290 GeneID:9268161

Length

1148 bp

Definition

Oryza sativa Japonica Group Os05g0542300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26983476..26984623

Sequence Coding Region

26983739..26983846,26984270..26984321,26984462..26984559

Expression

GEO Profiles:Os05g0542300

Genome Context

<gbrowseImage1> name=NC_008398:26983476..26984623 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26983476..26984623 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccatcagtttcagttgcatccagcatgagcaagctcaagttcttggtcactgtcgtcctcgtgatcctgctactgttcgattcatcgtcttcagggcaagctgagacagcatataccaattatgaagtgacttctaaagtgaaagagagaattcagaaacatagcaggagggttctgacagatgttcaggactatgactatggaggacccaaccctagacatgaaccacgtaagaagcctggaaatggacactaa</cdnaseq>

Protein Sequence

<aaseq>MPSVSVASSMSKLKFLVTVVLVILLLFDSSSSGQAETAYTNYEV TSKVKERIQKHSRRVLTDVQDYDYGGPNPRHEPRKKPGNGH</aaseq>

Gene Sequence

<dnaseqindica>778..885#303..354#65..162#aaccaacagtgcagtcacactctcgcacactatctgcataagaaggggataagctacctgattcatgccatcagtttcagttgcatccagcatgagcaagctcaagttcttggtcactgtcgtcctcgtgatcctgctactgttcgattcatcgtcttcaggcatgttgtttatcatgttcttgttcttttgtgtgttggtctgtcgggctgtgtaatactgatcagtgattttttttcttttttgcttggtccgtaactgattaatggacagttttaatttatctgtcgtctaaatgcagggcaagctgagacagcatataccaattatgaagtgacttctaaagtgaaagaggtatgtacttaattatccatcaatctttgtagtgaccatcagagagatgttagggtaatatatatttcagatctatcttggtgcttttcacgattccggtcttaatcaataactccgtatgctagctgactttaatttttgaaggacccaacatgattcatgacagctgacttagtattaacgagaagaaaactgtataacttgccctgttgtgcatgctaaatgtgcagaggcgtgttagctgataaaaaaaatgactctgaaactatctaatgttcgctgataaatacatgtgctggctgctgttggacacaataatcatcagaactgtgctatgatcagtgatgttttctttacagaaactacagttttcagtcaagtatgtatgtactaattaagtttcatatgtccttaccacctcagagaattcagaaacatagcaggagggttctgacagatgttcaggactatgactatggaggacccaaccctagacatgaaccacgtaagaagcctggaaatggacactaatcgcctcttctccacactgaaaccttgacaaagataagtcagatactcagatgatcccaaatgctacaatcaccagaccactatcttactgtaatgtactagaattaagcagaactgttaggtactattgtgtcgttaattaccttgtaatatgttggtcaggtgcatggagttcaggtcattttagacagtacctgcgtgtattcaggtgtgtgcttatataactagcaactggtaaaatacaactactgaggacattttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0542300, RefSeq:Os05g0542300