Os05g0546800

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Revision as of 10:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0546800| Description = Conserved hypothetical protein| Version = NM_001062755.1 GI:115465240 GeneID:4339505| Length = 2999 bp| Definition ...")
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Gene Name

Os05g0546800

Description

Conserved hypothetical protein

Version

NM_001062755.1 GI:115465240 GeneID:4339505

Length

2999 bp

Definition

Oryza sativa Japonica Group Os05g0546800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27200347..27203345

Sequence Coding Region

27200429..27201189,27202321..27202441,27202530..27202806,27202968..27203128

Expression

GEO Profiles:Os05g0546800

Genome Context

<gbrowseImage1> name=NC_008398:27200347..27203345 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27200347..27203345 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaggcccaccatagaagagaaactggcgacctactccatgttccaggttcgtcagggatccaccgtcccgatcaccgcgcgggagtggctggactctgtgatggctggagttggctcgatctctctggcggtgcggggtgctggctcgatctcggcggcggcaggagcgggagatggggcttgctcgagctcagtggcggtggcggggactggctcgatctcggcggcgggagcggcagatgggccttcctcaagctcagtggcggtggcggggactggcttgatctcggcggcgggagcggcagatggggcttgctcgagctcagtggcggtggcggggactggctcgatctcggcggcgcgagcgggagatgggcctttctcgagctcagtggcgggggcgggggctggctccatctcggcgacggcgggagcgggacatggagctgggtcgagctcagttgcggcggcggggtcaggcgaagccccggcgaggaggaagaggacgcctgggagatggaggaggatccctcgcacgctacctcatccttgcctgagaaagaggcccatgacatgggaggagcttctcgcggacagcttggacatgagcgatgaggttcactgcttcagagaggaggataagcccgctttccgcaagtccaaggcgcagatggccaggttctatcagaggatgatcgacatcgagaataacaagatcaaacaaatcttccgaccccgcgtcccatccgatacacacgagcaacatttgaccgcagaagagatggaggcagagttcgctggcaagaaagtttcttcccaagcttgtcactttgccaatttagcaattaaccactacaacaatattgaggagaacattgttaagattgagctttgtactgttcttttatcaaattgttttcatgagatctgtgggtccacatacgcccatgtcaactttactgccagggctgaggatgatgatcaggctaagaagagactatactttgcagagctcaagttgaatccggatcttctggcaaagaggagggaacgctttgtagagttgagccttgatccaaatattgttggatgtgctgatgatatcgagcccatgtgtgtcgtctctatacacaatcttcagggttcttgttttggtggatgccatgagatcaacaggagaattgattatgtaatgatcaggaatcaggactacgagcgttgtcacgcatgtagcgatcgtatcaagcatccatacgggacagaatttattgcagggcatgatagttccaagattccgtattacactgcaggctga</cdnaseq>

Protein Sequence

<aaseq>MRRPTIEEKLATYSMFQVRQGSTVPITAREWLDSVMAGVGSISL AVRGAGSISAAAGAGDGACSSSVAVAGTGSISAAGAADGPSSSSVAVAGTGLISAAGA ADGACSSSVAVAGTGSISAARAGDGPFSSSVAGAGAGSISATAGAGHGAGSSSVAAAG SGEAPARRKRTPGRWRRIPRTLPHPCLRKRPMTWEELLADSLDMSDEVHCFREEDKPA FRKSKAQMARFYQRMIDIENNKIKQIFRPRVPSDTHEQHLTAEEMEAEFAGKKVSSQA CHFANLAINHYNNIEENIVKIELCTVLLSNCFHEICGSTYAHVNFTARAEDDDQAKKR LYFAELKLNPDLLAKRRERFVELSLDPNIVGCADDIEPMCVVSIHNLQGSCFGGCHEI NRRIDYVMIRNQDYERCHACSDRIKHPYGTEFIAGHDSSKIPYYTAG</aaseq>

Gene Sequence

<dnaseqindica>83..843#1975..2095#2184..2460#2622..2782#tttccccatcgagagttcgccagaaggaagaaacctaaccctaagattgcgattcggcggcagcgacgaggcgcgggcggagatgaggaggcccaccatagaagagaaactggcgacctactccatgttccaggttcgtcagggatccaccgtcccgatcaccgcgcgggagtggctggactctgtgatggctggagttggctcgatctctctggcggtgcggggtgctggctcgatctcggcggcggcaggagcgggagatggggcttgctcgagctcagtggcggtggcggggactggctcgatctcggcggcgggagcggcagatgggccttcctcaagctcagtggcggtggcggggactggcttgatctcggcggcgggagcggcagatggggcttgctcgagctcagtggcggtggcggggactggctcgatctcggcggcgcgagcgggagatgggcctttctcgagctcagtggcgggggcgggggctggctccatctcggcgacggcgggagcgggacatggagctgggtcgagctcagttgcggcggcggggtcaggcgaagccccggcgaggaggaagaggacgcctgggagatggaggaggatccctcgcacgctacctcatccttgcctgagaaagaggcccatgacatgggaggagcttctcgcggacagcttggacatgagcgatgaggttcactgcttcagagaggaggataagcccgctttccgcaagtccaaggcgcagatggccaggttctatcagaggatgatcgacatcgagaataacaagatcaaacaaatcttccgaccccgcgtcccatccgatacacagtatgttaaaccccttcttctttctttcttttttttttctcatgggtatgtcaactacaccactaagaaaacatcatacaaatagaactttcctttcgtagatcctaacacacgtgaaatagcacacccattatattcctcattacaaagttcatgtgaaaaactatcattgtttttatcacttataaaacagtagtgaccgcaaacaagacatcgataattcagcttagaatagatctcctaaggacacaaggaagaggtggagacagaaaagccaaagttacttaatttggagacgaattctgtacaatcctttaaatgggtaaactgacattacaacttgcaaccattttaattaataagaaatgtggattttttaagctgcatttccattcttggtcactgaaacagttaaattataaaacttcagttgattcatttagctagtggtaagagatagaacatattaacaattgaactcttgtatatgcaacggatgtaatagttgaagtacgctatcgtcatagtattttaactcatcagatgcatcatgttcctgtgcaaacataggtggccatcttttatacagtctagcaactctttggtacttggccaaccttcacaaaaggtgcttgcatttataaattgaacaatcaaaggtcagatatgcgacagcaacagtgaatctgaaagaatgtcaggtactaacttctagagttagtttgaccatctcagcatcccaggatcaaataaaaattttcaggatggtttaagaatgtgcagtccaacttaggagttgccattagtcaattctctgagtttgaaaacaacactaaaatctgagctaattttaaaggaatgatccatcctgtgtgctgcactaatattcaataattatgttccaatctggatggcagacacaatctggatgggcttgaccaaggtttcatgcatgttgggtaatgaatattcccggggacaaaattaagcttgggtatgggtattcactattgatgcccgccatgcccaattgtcatccctatctatattcctgacaaaattaagtgaatacctaaaattggttttgtccaacacactgttgaatctattactcttttgaatatattgcagcgagcaacatttgaccgcagaagagatggaggcagagttcgctggcaagaaagtttcttcccaagcttgtcactttgccaatttagcaattaaccactacaacaatattgaggagaacattgtaatagcccttttccttgtttgctttccatgacatcatgagtctcaatgttgtaaactaataaacctttctatttttgtctgttcaggttaagattgagctttgtactgttcttttatcaaattgttttcatgagatctgtgggtccacatacgcccatgtcaactttactgccagggctgaggatgatgatcaggctaagaagagactatactttgcagagctcaagttgaatccggatcttctggcaaagaggagggaacgctttgtagagttgagccttgatccaaatattgttggatgtgctgatgatatcgagcccatgtgtgtcgtctctatacacaatcttcagggttcttgttttggtatgtttattactatcgacttatttactgtattctcaatttactgtgttctgattaatatgcttgcttatttgtaattactgtaaggtctctatttatgtttgtaagtgtgatagtaggacctcagcgatttattcgatatgttgatgttgcttttgtaggtggatgccatgagatcaacaggagaattgattatgtaatgatcaggaatcaggactacgagcgttgtcacgcatgtagcgatcgtatcaagcatccatacgggacagaatttattgcagggcatgatagttccaagattccgtattacactgcaggctgatgtaataataatatgattagagctatgacttggagtattgttagaatttagactctttatttatgctttgacatctatgtgcgcgagtgatctcttctaatgcgcaaatattacctgatgaagtagccaggatctttaatgaagcctctatggtatgtctactgtaaccaggatcattaatgctctattcagttgctccctctgggctagtattatt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0546800, RefSeq:Os05g0546800