Os05g0547100

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Revision as of 10:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0547100| Description = Conserved hypothetical protein| Version = NM_001062756.1 GI:115465242 GeneID:4339506| Length = 3089 bp| Definition ...")
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Gene Name

Os05g0547100

Description

Conserved hypothetical protein

Version

NM_001062756.1 GI:115465242 GeneID:4339506

Length

3089 bp

Definition

Oryza sativa Japonica Group Os05g0547100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27211856..27214944

Sequence Coding Region

27212778..27213035,27213124..27213260,27213384..27213426

Expression

GEO Profiles:Os05g0547100

Genome Context

<gbrowseImage1> name=NC_008398:27211856..27214944 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27211856..27214944 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggataagaagcctgcgaggaatctcaccgcctgccttgccgccattgctggcgctgtcgtgaataacagcaatggcggaaagttgcctggtctgtcacggaagctgttccagaaggcgccgtcggaacacaagaagaacgcactgacggaggtcaagagcggtggcaacacgcgggcgctcgccatggtgctgcgcggcgagtgggtggacgagatcgctgcactccgcctccagttcgagcagaaggacattgaggttgagcgcctcaaggacctgtgcctgtggcagcgggaggagatctggacgctcaagggcgccgtgttcttcccggctacacaaccggaccacaacctcacgggacagatccaataccttgctgaaaagatcgcggtggttaaaaccaagaaacatatgccaagatcatgcatgttttga</cdnaseq>

Protein Sequence

<aaseq>MDKKPARNLTACLAAIAGAVVNNSNGGKLPGLSRKLFQKAPSEH KKNALTEVKSGGNTRALAMVLRGEWVDEIAALRLQFEQKDIEVERLKDLCLWQREEIW TLKGAVFFPATQPDHNLTGQIQYLAEKIAVVKTKKHMPRSCMF</aaseq>

Gene Sequence

<dnaseqindica>923..1180#1269..1405#1529..1571#cgttagagggacgtcctcgcacgatcgccgttcatcccgcatccaacgctggcatcggctctgcggccgtccgtcgtcctcccgctgccgccgccgcgcgcgtcggagccgacgccatcgccggcgctacccgccacccccccggccccgccggccgtgagcgacgcgggcgtcgtagccggtgcctgcgctggcgctccctccccccttgttctcctcccactccgcccgccggcaacggggcttgaggtgccggcgaatccgaccgcgcacgggcaccccgccaccgccgcccgtcagatccagcggggagaggctggccgtgccccccgcgcctccacgaggggatctgcgttgagggggaggacgaggaggctgcggagaaggaagacgaggacgaggaaggccccagcgctcgtcgtcgtgcctgccttcttcgctcgttgtcgctcttctgccccatctccggctaccgccgtcgccgtcgccccccgggtccccggcatcgtcgccgctgtcgtggcctccttgagcccttgacgaggaggggcccttcacctgaggccgcgacgagaacaaggacgaggacgatacgccgcttcggctgatgggtcgtggcggagccagatccaaacgccttcgactcctccacccttgccgtcggcttccaggcggcgggcagcagcaggcatcggaggtgacccgggcaccgagcaggagttgttcttagcgtgcctcctacaacgcgccgtcgcccgcgacgtgctggtcccgtcatcagcgcggcggcgacgccgaggtatgggagccgcgcgctggtggtggccagatccgtgcgtcacctgcgcgcacaggcgcacaggcggcgcaacagctgacgcagcacgggaacatcgggtatgtgcttcgcacactcatctccatggataagaagcctgcgaggaatctcaccgcctgccttgccgccattgctggcgctgtcgtgaataacagcaatggcggaaagttgcctggtctgtcacggaagctgttccagaaggcgccgtcggaacacaagaagaacgcactgacggaggtcaagagcggtggcaacacgcgggcgctcgccatggtgctgcgcggcgagtgggtggacgagatcgctgcactccgcctccagttcgagcagaaggacattgaggtacacacacagacatatccacctcttccccactcctctgtgccctctgtggatgccaacgtgaccttactgcgattgcggcgttcaggttgagcgcctcaaggacctgtgcctgtggcagcgggaggagatctggacgctcaagggcgccgtgttcttcccggctacacaaccggaccacaacctcacgggacagatccaataccttgctgaaaagatcgcggtggcacgttttcttttcttttcttttcttttctttaacgtttttcaatgcagacacttcactaactctattgattacccacctaatcacctaatcttccgtctgcaatcgtttcactatgtacaggttaaaaccaagaaacatatgccaagatcatgcatgttttgatgacgaatactgctgttccccaagtactgtacgctggtgcttaatgagaatgctttctcactggtaattttcacatgctccaccattcgtctgctacaagtacgattttcaaaatccagatggaccatttgactgctactgtcaactgcttatatgtgctccttcataaattgccttcaaatcaatctttttaaatccaaagttcgtgctaccaagtttgcagtatgcattttcttctcaaacttgatagtctgctatgcaaaggtagttcagtggttcatttcttaataccagttttgaaagtctctttctcctgttgttgtttgtccttacagttgttctcccatggcgatgaaccacttagctatgattctcaccgtaaatttcttgcaaactattgatcaattaattagatggtttgatatttagttaaatattgatcagtcgcttaattttcttaatagttacatgatctatattccaatcagttacttagttttactataaatttcttatttcttgatcgataacttagttttggtacatgatctgcaatatgtaatcgatcttgacaccttgtaatcaacgttgctagctcccaagtctctcgatctttcgattctccccaatatctctttatcgttttgccatgcacactttgatgtggtaaagataaattacctacttaattaaccttccattaaatctttagattagtacctggtccacttttgaagtgccttctaatatttgtgttttaaatcgttagatcgaatggaatcaactgatctcgtttttccaaccataacataaaaatctccttttgtgcaatcacaaagtggaggtataagtagccattttacgtcttctgtgcacatcaaatgttagatgtgccttgtaaattctttaagttatttttcaggtagatgcttttccattttttgctgggccatcagtatcttagtctttgttcctgacaggcactatcgatcggctagatgttcttgaactcttgaatgcctgatgcttgatcagtgtgtcctaccaggcatgatatctccagagttcagatttgcttcttgtgaatactggctaagtaaaactggtaactattggcaattcggcatacatactactgaaaggacggtccttccaggcgtgacatctccatgttccagaatttttttgtgtgttttcactaacaaaggcggttattctttagacatttggtgctttcccattcaccaccgcatggatcttttgatatactatgcaggtaactaacagcacaggcaattatattctgctctttcaagattttagaatgatcatgtcctttagtttgtattttttgcatgtaccatacgattgatcaggctaaaaaagcatacccctttgtaattgagaacatattctgtaatagttcttttaggattgcgaacttcatttgtgttatattctctgttaaggaatgtgctaatcagcagaagaatgacaatagagatttttgttcccttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0547100, RefSeq:Os05g0547100