Os05g0548300

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Revision as of 10:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0548300| Description = Similar to Multidrug resistance protein 1 homolog| Version = NM_001062761.1 GI:115465252 GeneID:4339511| Length = 22...")
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Gene Name

Os05g0548300

Description

Similar to Multidrug resistance protein 1 homolog

Version

NM_001062761.1 GI:115465252 GeneID:4339511

Length

2264 bp

Definition

Oryza sativa Japonica Group Os05g0548300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27287994..27290257

Sequence Coding Region

27287996..27288315,27288413..27288641,27288746..27289012,27289085..27289348,27289431..27290099

Expression

GEO Profiles:Os05g0548300

Genome Context

<gbrowseImage1> name=NC_008398:27287994..27290257 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27287994..27290257 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cttaacaaaccagagataccagttcttctattaggtacagctgctgcagttgtagcaggtgttctcttcccaatgttaggtttgctgatctccagttccataaaatcgttctatgagccaccacatcaacttaagaaagatgcacggttctggacattgatgtatgtagcagctggaattgtttcccttgtttccttgccaatggaaaatttcctatttggagtggctggtgggaaattggtggagcgcattcgttctttatcttttaaaagaattgttcatcaagaagtcagttggtttgataatccctcaaatgcaagtggaacaattggtgcgaggctatctgttgatgcttcaaatattcggcgtcttgtaggagactcgttagcgttgattgttcgaagctctgttacaattattgctggatttatcattgcaatggttgcaaactggaggcttgcccttgttgccacggttgtgcttcctttgggaggtctccaggggttcttccagataaagtttttggagggattcagtgcagatgctaaggtaaagtatgaagaagcaactcaagtagcacatgatgctgtcagtagcatacggactgtcgcttcgttctgtgcggagaataggataatgaaggcttactacaaaaaatgtgaagctccggtgcgacaggggatacgtcaagggattgtcagtggcttgggtttcggcatatcattctttgtgctctattctacatatgccctttgtttctatgtaggagccaagttcatgcttgatggcaaggccacattcactgaaatattcagggtgttctttgctttgctcatggcaaccataggagtttcccagacaagtgcgatgggttcagattctgccaaggccaaggcgtcggcatcctcaatatttgccatgattgaccgtgaatcgaagatcgactcgagcagtgatgacggcatggtcttagctaatgtggctggtgagctcgaactccaccacgtctgtttctcatacccatcacgcccagacatacaaatattcagaaatctgtcactgagaataccatcaggaaagatggttgcccttgtcggagagagcggctgtggcaaatcaaccgtgatagcactactggaaagattttacgaccctgattcaggaacagtgacactagacggcgtcgacatcaagaacctcaaagtcgggtttctgcggcagcagatggggctggtgagccaagagcccgtcctgttcaacgacacggtccgcgccaacatcgcctacggcaaggaaggcgacgccacggaggaggagatcgtcgccgccgcgagggccgcgaacgcgcaccagttcatctcggcgctgcccgggggctacgacacctgcgccggcgagaggggcgtccagctctccggcgggcagaagcagcgcgtggccatcgcgagggccatcctcaaggaccccaggatcctcctcctcgacgaggcgacgagcgcgctggacgccgagtcggagcgcgccgtccaggcggcgctggagtcggtgatggtcggccggacgacggtcgtggtggctcaccggctgtcgacgatcaggggcgccgacgtgatcgccgtcctcagggacggcgaggtcgtggccacggggaggcacgtggagctgatggcgaagaaggatggcgtgtacgcttcgttggtggagctccgcatgagctccgaacgcgccggtgactccaagccctcgtga</cdnaseq>

Protein Sequence

<aaseq>LNKPEIPVLLLGTAAAVVAGVLFPMLGLLISSSIKSFYEPPHQL KKDARFWTLMYVAAGIVSLVSLPMENFLFGVAGGKLVERIRSLSFKRIVHQEVSWFDN PSNASGTIGARLSVDASNIRRLVGDSLALIVRSSVTIIAGFIIAMVANWRLALVATVV LPLGGLQGFFQIKFLEGFSADAKVKYEEATQVAHDAVSSIRTVASFCAENRIMKAYYK KCEAPVRQGIRQGIVSGLGFGISFFVLYSTYALCFYVGAKFMLDGKATFTEIFRVFFA LLMATIGVSQTSAMGSDSAKAKASASSIFAMIDRESKIDSSSDDGMVLANVAGELELH HVCFSYPSRPDIQIFRNLSLRIPSGKMVALVGESGCGKSTVIALLERFYDPDSGTVTL DGVDIKNLKVGFLRQQMGLVSQEPVLFNDTVRANIAYGKEGDATEEEIVAAARAANAH QFISALPGGYDTCAGERGVQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERA VQAALESVMVGRTTVVVAHRLSTIRGADVIAVLRDGEVVATGRHVELMAKKDGVYASL VELRMSSERAGDSKPS</aaseq>

Gene Sequence

<dnaseqindica>3..322#420..648#753..1019#1092..1355#1438..2106#ctcttaacaaaccagagataccagttcttctattaggtacagctgctgcagttgtagcaggtgttctcttcccaatgttaggtttgctgatctccagttccataaaatcgttctatgagccaccacatcaacttaagaaagatgcacggttctggacattgatgtatgtagcagctggaattgtttcccttgtttccttgccaatggaaaatttcctatttggagtggctggtgggaaattggtggagcgcattcgttctttatcttttaaaagaattgttcatcaagaagtcagttggtttgataatccctcaaatgcaaggtcagtctctaattattccacggttgtgcattacattcccagatttaccattaaatctgcactgcgttatttacttcctttactgttttatgcccagtggaacaattggtgcgaggctatctgttgatgcttcaaatattcggcgtcttgtaggagactcgttagcgttgattgttcgaagctctgttacaattattgctggatttatcattgcaatggttgcaaactggaggcttgcccttgttgccacggttgtgcttcctttgggaggtctccaggggttcttccagataaagtttttggagggattcagtgcagatgctaaggtacatgtcacctctgggcaaaaaataaaaataaaaatgataccatcctgctaaatgtactcctgtagtcctcttgctatatttttctgaatgttgggttgcaggtaaagtatgaagaagcaactcaagtagcacatgatgctgtcagtagcatacggactgtcgcttcgttctgtgcggagaataggataatgaaggcttactacaaaaaatgtgaagctccggtgcgacaggggatacgtcaagggattgtcagtggcttgggtttcggcatatcattctttgtgctctattctacatatgccctttgtttctatgtaggagccaagttcatgcttgatggcaaggccacattcactgaaatattcagggtgagagaactctcaagctgattcgctttcagtcgttttgtgttgtgtaatttctaatgtgttcctctctaggtgttctttgctttgctcatggcaaccataggagtttcccagacaagtgcgatgggttcagattctgccaaggccaaggcgtcggcatcctcaatatttgccatgattgaccgtgaatcgaagatcgactcgagcagtgatgacggcatggtcttagctaatgtggctggtgagctcgaactccaccacgtctgtttctcatacccatcacgcccagacatacaaatattcagaaatctgtcactgagaataccatcaggaaaggtaacatataaatatataattctaccaccttaccataaaatctttcgtttctctccaacatatattaagcattttcttgtagatggttgcccttgtcggagagagcggctgtggcaaatcaaccgtgatagcactactggaaagattttacgaccctgattcaggaacagtgacactagacggcgtcgacatcaagaacctcaaagtcgggtttctgcggcagcagatggggctggtgagccaagagcccgtcctgttcaacgacacggtccgcgccaacatcgcctacggcaaggaaggcgacgccacggaggaggagatcgtcgccgccgcgagggccgcgaacgcgcaccagttcatctcggcgctgcccgggggctacgacacctgcgccggcgagaggggcgtccagctctccggcgggcagaagcagcgcgtggccatcgcgagggccatcctcaaggaccccaggatcctcctcctcgacgaggcgacgagcgcgctggacgccgagtcggagcgcgccgtccaggcggcgctggagtcggtgatggtcggccggacgacggtcgtggtggctcaccggctgtcgacgatcaggggcgccgacgtgatcgccgtcctcagggacggcgaggtcgtggccacggggaggcacgtggagctgatggcgaagaaggatggcgtgtacgcttcgttggtggagctccgcatgagctccgaacgcgccggtgactccaagccctcgtgaccatgagcacacggtggttgccgtcaccgtgctgctgcatgccaagactgtacataggattgggagtaaggctgcgttctttcttcttgtcaacagtgattacggaaaacggagcgatccattagcacatgattaattaagtatctgctattcttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0548300, RefSeq:Os05g0548300