Os05g0549900

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Revision as of 10:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0549900| Description = Similar to Lipid phosphate phosphatase 2 (EC 3.1.3.-) (AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2) (Prenyl diph...")
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Gene Name

Os05g0549900

Description

Similar to Lipid phosphate phosphatase 2 (EC 3.1.3.-) (AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2) (Prenyl diphosphate phosphatase)

Version

NM_001062773.1 GI:115465276 GeneID:4339523

Length

3179 bp

Definition

Oryza sativa Japonica Group Os05g0549900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27392696..27395874

Sequence Coding Region

27392696..27392850,27393680..27393868,27394540..27394599,27394698..27394886,27395021..27395114
,27395224..27395333,27395562..27395874

Expression

GEO Profiles:Os05g0549900

Genome Context

<gbrowseImage1> name=NC_008398:27392696..27395874 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27392696..27395874 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccaccgccgccggcgacgtcgccggcgccggcagccattcggctgggagccccgcacccgtacctgagaacccacgggaccaaggtcgcgaggctgcacctgctcgactggatcgtgctggccctcctcgtcgccatcgacgccggcctcaacctgatcgagccgttccaccggttcgtcggagaagacatgatgatcagcctccggtacccgctcaagcgcaacaccgtccccatctgggccgtccccgtacgcctccatctccctccatttcttgatttcagaaagaaaaaaactgtgccggataggcttctgttttctgtgctgatcactgccgtcctgaccgacgcgatcaaggatggcgttggccggcctcgcccgaatttcttctggcgatgctttcctgacgggatcccgaagtacaacaacatcaccagaggtgtcatctgccatggggataaaagtgtcatcaaagaagggcacaagagcttcccaagtggccatacctcatggtcttttgccggattaggcttcctgtcatggtacctggccggcaagatcaaggcgttcgacagaggagggcatgtggccaagctctgcattgtcgtcttgcctctgcttattgcagcgatggttggggtctcaagggtggatgactactggcaccattggcaggacgtgtttaccggtggaattcttggattggtggttgcttccttctgctaccttcagttcttcccaccacctgctggtgaacaaggcggcggcgagcacgatcttcatggacctcgaggctgggcgtccaccgaagccgagctcaccgatggcggtgcgctggcggcggaggaaggagttgaggtgcgagatgccattgtcgaacctgtcaatggcggttggggaggaggaagaggcaaagatgtggcggcagtggtgagggtttgcggcggaggattttggcctcatgcatactttgagcacattcttcacccagaagttgagaaccaggtgcagctaacagctacttcaaatcatcatcaaggcctggacatgagaaccaacaaccagtcattagattccatggaagaaggccgaagagctcggtga</cdnaseq>

Protein Sequence

<aaseq>MPPPPPATSPAPAAIRLGAPHPYLRTHGTKVARLHLLDWIVLAL LVAIDAGLNLIEPFHRFVGEDMMISLRYPLKRNTVPIWAVPVRLHLPPFLDFRKKKTV PDRLLFSVLITAVLTDAIKDGVGRPRPNFFWRCFPDGIPKYNNITRGVICHGDKSVIK EGHKSFPSGHTSWSFAGLGFLSWYLAGKIKAFDRGGHVAKLCIVVLPLLIAAMVGVSR VDDYWHHWQDVFTGGILGLVVASFCYLQFFPPPAGEQGGGEHDLHGPRGWASTEAELT DGGALAAEEGVEVRDAIVEPVNGGWGGGRGKDVAAVVRVCGGGFWPHAYFEHILHPEV ENQVQLTATSNHHQGLDMRTNNQSLDSMEEGRRAR</aaseq>

Gene Sequence

<dnaseqindica>3025..3179#2007..2195#1276..1335#989..1177#761..854#542..651#1..313#atgccgccaccgccgccggcgacgtcgccggcgccggcagccattcggctgggagccccgcacccgtacctgagaacccacgggaccaaggtcgcgaggctgcacctgctcgactggatcgtgctggccctcctcgtcgccatcgacgccggcctcaacctgatcgagccgttccaccggttcgtcggagaagacatgatgatcagcctccggtacccgctcaagcgcaacaccgtccccatctgggccgtccccgtacgcctccatctccctccatttcttgatttcagaaagaaaaaaactgtgccggatagtgcgatgtttcagttctgtactaaatcttgctctcgttgatggcgcagatatatgctgtcgctgggccgatgatcatcttcattgtgatatacatgaagaggaggaatgtgtatgacctgcatcatgcgatcctaggcaagtttctttgcattgtctgctgctgattgcaattctgaattctgaaatgtgaaacgtgaattgtgaattttgcttgctatggatgcagggcttctgttttctgtgctgatcactgccgtcctgaccgacgcgatcaaggatggcgttggccggcctcgcccgaatttcttctggcgatgctttcctgacgggatcccggtgagttcttttgccacttctgttaatttgttcagttcatgggttcttcagaactagatgaatccggctataacttattaacttgctggttctgaaactctattttcagaagtacaacaacatcaccagaggtgtcatctgccatggggataaaagtgtcatcaaagaagggcacaagagcttcccaagtggccatacctcatgtaatcctgaaaaccattttctgcttacgtagtggttaaacaaaatgctccactgaacactgaaccaaacttcatttccaagctaaaaattagaaatgatttgcagttacaagcttccatttctgttcttgcagggtcttttgccggattaggcttcctgtcatggtacctggccggcaagatcaaggcgttcgacagaggagggcatgtggccaagctctgcattgtcgtcttgcctctgcttattgcagcgatggttggggtctcaagggtggatgactactggcaccattggcaggacgtgtttaccggtggaattcttggtaggtttgcatgaaagatcagagctgcctttcacctgctacaaattcctctttttcagagcacgatatcatactgtcatgttggcttcactctgcaggattggtggttgcttccttctgctaccttcagttcttcccaccacctgctggtgaacaaggtgatgcctttagttcttgctttcaatcacttcctttttttgggtaaattctccatacattttttctacaatataggaacctttcctgctgtttatatttttttaaaaagctgtgataagtacatgtacatcatcattttctgagaaaaaaagtacatatacatcatagtacaaatacctttatgtaaggctcagctaaagtgaatagacattctcttttaggaaagctaaagtgaatagacttgaggaagttcaccagccatcccttaattttatgtggagtttgtttcacattctttatcttcaataccagaaatcttatccctaaactatacaaaaccatgcaatttgtgcccatagtagatggatctctggtttcgctaacatggcatcctagttagaaaaaaataaaataaaataaggcccacttagaagagaaaaaaatgtggggtttgcatctcccccttcttcttctcttttctctcttttttttttatatttcttttcttcctgggaggctgccagcggtagagggagagaccgggagaggcggctggcgagcctgggagggagggggaggcggccagtgagcgccgcctcgagaggctccaccgccgccttgagcgcccaccgaagccgcggctgaccccgcccgcgtcttcttggtggaggcggcggcgagcacgatcttcatggacctcgaggctgggcgtccaccgaagccgagctcaccgatggcggtgcgctggcggcggaggaaggagttgaggtgcgagatgccattgtcgaacctgtcaatggcggttggggaggaggaagaggcaaagatgtggcggcagtggtgagggtttgcggcggaggtaggtgaggtggaggtggaggtggaagatgttgtgcgacggtaggtggaggaggaggaggagtccgcggcggaagggtcatggaagcggcgagacaacgacggatttgggtgcagggagtgggcgggggatgccggtgtgaaggcgaagtggtcggctgcctctctcccctctctcaccgacgcggccggctgcctctctccccctctccctcccaggctcaccggcctcctctcccgtcggcgcggccggccgcctctccctccctctctttcccaggcttgctagtcgcttctctccccctctctctcccaggcttgctaggcacctctcccgtcgggcgcggccagccacctctccaccctcttccgccggctgcctcaccctctctcccaggcttggaaagaaaagagagagatgatgggggctgacacgtgagccctacatattaattttattttgctgactaggatgtcacgtcagcgaaatccgacatccatatagaacccaaattgcacggttttgtataatttaggggtgaaaatttcagtattggagataagggatgtgatataaacttgacgtaaagttgagggacggctggtgaagcacccttttgtttctgtcaactggcttaaggaacgtactaaaccggcccagtcagacatggtagttcatgttagactttttgaggcccatattctgaaattcataatgggccgtgctaaacctattcaggctggatcaactcaatgagaaggcccagtaatgttaaacataaacctgaatctttgcgtcaaaaaataaacctgaaccttttgaattgtaggattttggcctcatgcatactttgagcacattcttcacccagaagttgagaaccaggtgcagctaacagctacttcaaatcatcatcaaggcctggacatgagaaccaacaaccagtcattagattccatggaagaaggccgaagagctcggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0549900, RefSeq:Os05g0549900