Os05g0552900

From RiceWiki
Revision as of 10:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0552900| Description = MAP65/ASE1 family protein| Version = NM_001062795.1 GI:115465320 GeneID:4339545| Length = 4406 bp| Definition = Ory...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0552900

Description

MAP65/ASE1 family protein

Version

NM_001062795.1 GI:115465320 GeneID:4339545

Length

4406 bp

Definition

Oryza sativa Japonica Group Os05g0552900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27586515..27590920

Sequence Coding Region

27586719..27587095,27587192..27587393,27587481..27587555,27587648..27587721,27587814..27587901
,27587986..27588137,27588577..27588736,27588851..27589006,27589087..27589296
,27589400..27589648,27590279..27590485,27590578..27590671,27590768..27590919

Expression

GEO Profiles:Os05g0552900

Genome Context

<gbrowseImage1> name=NC_008398:27586515..27590920 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27586515..27590920 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atccctcatcatttcccccaaaatcgcgcggccgtctccggccaaatccacgccgccgccgccgccgccgccgccgccgccgaggacgacgcagcggtgccctcgtttcggcctcccgtatcgccctccgtcgagccgagccaccgagactggctgcgtggtatcgtcctcacgaggagcggcaatccgaaggagcgcctcctcccgatgaagaccatatgcggatccctcatgcacgagctccaggtcatctgggacgaggtcggggagcccgaggccgcgagggacaggatgctgctggagctcgagcaggagtgcctggaggtgtacaggaggaaggtggaccaggcgaaccgctcccgcgcccagctgcggcaggcgatcgctcaatatgaagctgaactcgccgccatctgctccgccattggcgagacgacggtccacgtcaggcagtctaatcagaaagcatgtggattacgggatgagctcggtgcaatattaccatacctagaagagatgaagaggaagaaggttgaaagatggaaccagtttcttgatgtcgtaggaaggataaagaagatctcatctgagataaggccagcaaattttgacccttttaaagtgtctgtggatcaatctgatctatcattaagaaagcttgaagagttaagggtggagctgaagtcccttgaaaaggagaagggtgagagggtaaagcaagttatggaatatttgaagactttacattctttatgtgtagtacttggtgtcgacttcaagaaaacaatatctgaaatacaccctagtcttgatgaagctgaagggccaaggaatataagcaacactacaattgagatgctagcatgggcgattcagagacttcgtgaaacaaaaatgcagaggatgcagaagcttcaagatcttgcatctaccttgctagaactatggaatctaatggatacgccatttgaagagcagcaggcataccagaatataacatgtaatattgctgcttcagaggctgaattaacagaacagaacaccctttccattgagttcctcaactatgtggaagctgaggtattaaggcttgaacagcacaaagcaagcaaaatgaaggagcttgttctcaagaagaaaacagaactagaagaacatcgacgacgggcacatttagttggagaggaaggttatgcaactcagttcacaattgaggccattgaagcaggggctattgatccctctttgttgctcgagcaaattgaggcttatatttcaacagtgaaagaggaagcttttagcaggaaggacattctcgagcgagttgagaagtggctaaatgcacgtgaggaagaggcttggttggaagattacaacaaagatgacaaccggtataatgctgggagaggtgcacacattatgcttaagagggctgaaaaagcgcgtgttctggttagcaagattccaggaatggtagatgttcttgaaacaaaaaccagagcttgggaaactgaaagaggcaatgagttcacatatgatggcgtccgacttatattgatgcttgaagaatacatggttgttcgtcaagagaaagagcaggaaaggaagaggcaaagggatcaaaagaagcttcaagatcaacgcaaagctgagcaggaggcactttatggatcaaagccaagctcttcaaaatctcacagcactaagaaggtacccagaaactccacacctggagttcaacctcctaaatcagagatacttcattcaaagactattcgtgcaaccaagaaaacggaagatatcaacactccttcccctggtcataaaggtttagacactgttggtctccctatcaggaagttatttccatcttccaactcgagcactcttcttgagatggagacaccccggaagcccttctctcagattacacctggaaacatatcctcagctcctgtgcgtccaatctccactggtggtactgaagagaacaggactcccaagacatttgcaccagttcctacgactccgatgacagtgagccctcatatgcaaatggcagtgacgcctgttcttaccgcaaaagctgtttctgtactctcttatgacgaaccggagctgacttcacaagaggacaccgagtactcatttgaagagaagcgtcttgcagtctatcttgccgcacaagtggcttga</cdnaseq>

Protein Sequence

<aaseq>IPHHFPQNRAAVSGQIHAAAAAAAAAAEDDAAVPSFRPPVSPSV EPSHRDWLRGIVLTRSGNPKERLLPMKTICGSLMHELQVIWDEVGEPEAARDRMLLEL EQECLEVYRRKVDQANRSRAQLRQAIAQYEAELAAICSAIGETTVHVRQSNQKACGLR DELGAILPYLEEMKRKKVERWNQFLDVVGRIKKISSEIRPANFDPFKVSVDQSDLSLR KLEELRVELKSLEKEKGERVKQVMEYLKTLHSLCVVLGVDFKKTISEIHPSLDEAEGP RNISNTTIEMLAWAIQRLRETKMQRMQKLQDLASTLLELWNLMDTPFEEQQAYQNITC NIAASEAELTEQNTLSIEFLNYVEAEVLRLEQHKASKMKELVLKKKTELEEHRRRAHL VGEEGYATQFTIEAIEAGAIDPSLLLEQIEAYISTVKEEAFSRKDILERVEKWLNARE EEAWLEDYNKDDNRYNAGRGAHIMLKRAEKARVLVSKIPGMVDVLETKTRAWETERGN EFTYDGVRLILMLEEYMVVRQEKEQERKRQRDQKKLQDQRKAEQEALYGSKPSSSKSH STKKVPRNSTPGVQPPKSEILHSKTIRATKKTEDINTPSPGHKGLDTVGLPIRKLFPS SNSSTLLEMETPRKPFSQITPGNISSAPVRPISTGGTEENRTPKTFAPVPTTPMTVSP HMQMAVTPVLTAKAVSVLSYDEPELTSQEDTEYSFEEKRLAVYLAAQVA</aaseq>

Gene Sequence

<dnaseqindica>3826..4202#3528..3729#3366..3440#3200..3273#3020..3107#2784..2935#2185..2344#1915..2070#1625..1834#1273..1521#436..642#250..343#2..153#aatccctcatcatttcccccaaaatcgcgcggccgtctccggccaaatccacgccgccgccgccgccgccgccgccgccgccgaggacgacgcagcggtgccctcgtttcggcctcccgtatcgccctccgtcgagccgagccaccgagactggtgagtgaactcgaggccgtaggcgttactgctggttgatcgtgccaaccctaattctgacgccgatcaatctctccccgtttgattcccctgcaggctgcgtggtatcgtcctcacgaggagcggcaatccgaaggagcgcctcctcccgatgaagaccatatgcggatccctcatgcacgagctccaggtgcgcctcgctgtcgactgatctgctgttgccgcgatggcggtgacaggttttgttggtctctcgctgattcagatcgctcgtggttgcaggtcatctgggacgaggtcggggagcccgaggccgcgagggacaggatgctgctggagctcgagcaggagtgcctggaggtgtacaggaggaaggtggaccaggcgaaccgctcccgcgcccagctgcggcaggcgatcgctcaatatgaagctgaactcgccgccatctgctccgccattggcgagacgacggtccacgtcaggcaggtctgtcacttttgcttctgttttctgtcgtttaagagcttatgttttgatggttgatacgatttactgtgttatggtactataatggtttggggcgcatcagaatttagccgtttctccgattcaaaaacactacccacaattgtattgtgatattatcgaattattattaggctatgaattcatatgttcttcgtatactacctttcgcctgtattcaagcatggtaacttcatcattttccgttagcatattttccgaactggtaagcagtgtgtgttttgcaaaaactttttgcatacaaatttattctaaaaaacaaataaacccaatttttgagtttataataattaattcttaattaatcatgcactaatgacttatattgttgtgcatgccacggagttgccacacccaatagccggaaggagcacaaccctctagattatatcccatctagtactggttgctatatcttgagacggaggtagtatatgattacagtcacagatgggctcatttaatgtgtattatttagttatccaacttgaaaggtagaagtatgctgtagcgaaataggatctaccagtaaggcagtaattagttctttgtttttgattgttttatcagtctaatcagaaagcatgtggattacgggatgagctcggtgcaatattaccatacctagaagagatgaagaggaagaaggttgaaagatggaaccagtttcttgatgtcgtaggaaggataaagaagatctcatctgagataaggccagcaaattttgacccttttaaagtgtctgtggatcaatctgatctatcattaagaaagcttgaagagttaagggtggagctgaagtcccttgaaaaggagaaggttcttcttgaagcttttagctctatgtattatttgaattccttttcaatttctattttctaatgtattctgattcagttattaaatttctgaattctgatagggtgagagggtaaagcaagttatggaatatttgaagactttacattctttatgtgtagtacttggtgtcgacttcaagaaaacaatatctgaaatacaccctagtcttgatgaagctgaagggccaaggaatataagcaacactacaattgagatgctagcatgggcgattcagagacttcgtgaaacaaaaatgcagaggatgcagaaggtctgcatcttactatttcaattcagggaatggccaaatggtatatatctgctttcaactaactgtattagctctgccagcttcaagatcttgcatctaccttgctagaactatggaatctaatggatacgccatttgaagagcagcaggcataccagaatataacatgtaatattgctgcttcagaggctgaattaacagaacagaacaccctttccattgagttcctcaactatgtgagttaatgatcttttggagaacttgctttcgtgagtcttgtggttgtcattttctgttttctactgagataatgatactagagtcagaggacatgatattctttgatccaggtggaagctgaggtattaaggcttgaacagcacaaagcaagcaaaatgaaggagcttgttctcaagaagaaaacagaactagaagaacatcgacgacgggcacatttagttggagaggaaggttatgcaactcagttcacaattgaggccattgaagcaggtaatatgttatggaatgattccctgggtgtgttcgcttttcctagatcccaaccggatccctctgcacggaaaatggagtggttcattagcgcgtgattaattaagtattagctattttttttaaaaaaatggattaatttgattttttaagcaactttcatatagaacctttttttttgcaaaaaacgtaccgtttagcagtttgaaaaacttgcgcgcggaaaacgagagagagaggagttgggaaaaggggcatccgaacacacccttagatttctgtgcaagttcttgaaggtagtttcagttaattgatcctcctacctcctttgctcatgcattccgttgagaggatgtgtcatgtgtgttaagctgttaatgctgtttatttagtaaaatgttttattgcccaaaatatgtcttcactctttccatttcaggggctattgatccctctttgttgctcgagcaaattgaggcttatatttcaacagtgaaagaggaagcttttagcaggaaggacattctcgagcgagttgagaagtggctaaatgcacgtgaggaagaggcttggttggaagattacaacaaagtactgtcctatcagaacaatttatatgaaaagattttttttccgcacctgctgctgattgcggtgtccgcatgacatgatcaggatgacaaccggtataatgctgggagaggtgcacacattatgcttaagagggctgaaaaagcgcgtgttctggttagcaagattccaggtgacaatcaattattaaacacaatgttatgctttcattcttaatttcttatcatttctgctcctgatttgctgctattgtgttgtggacaggaatggtagatgttcttgaaacaaaaaccagagcttgggaaactgaaagaggcaatgagttcacatatgatggcgtatatttctctattcatgccgtttattttatgtattatttacaaagccagttttgagaattgccaaaactcgtgtcgtacaatgtttgcaggtccgacttatattgatgcttgaagaatacatggttgttcgtcaagagaaagagcaggaaaggaagaggcaaagggtactagctgtatcctaatttgtgtgcttttgttaccatcttcttacgtggtaacgtgggtgagatctgaaatctgagtaattgtaggatcaaaagaagcttcaagatcaacgcaaagctgagcaggaggcactttatggatcaaagccaagctcttcaaaatctcacagcactaagaaggtacccagaaactccacacctggagttcaacctcctaaatcagagatacttcattcaaagactattcgtgcaaccaagaaaacggaagatatcaacactccttcccctggtaacttcgacttaaatatatctgaagcaatatttctaaatttttacttagtatgtagtacgatctgactatctctgatctcaaaaataaactcaggtcataaaggtttagacactgttggtctccctatcaggaagttatttccatcttccaactcgagcactcttcttgagatggagacaccccggaagcccttctctcagattacacctggaaacatatcctcagctcctgtgcgtccaatctccactggtggtactgaagagaacaggactcccaagacatttgcaccagttcctacgactccgatgacagtgagccctcatatgcaaatggcagtgacgcctgttcttaccgcaaaagctgtttctgtactctcttatgacgaaccggagctgacttcacaagaggacaccgagtactcatttgaagagaagcgtcttgcagtctatcttgccgcacaagtggcttgactgtcaaggatgctgatacatccgttgtgtagctgaaagtctgaacctttgatagcatttctcatgttacagagacttgtgtaggtcgacagcagtcggccttattcataaccatactttacgttttcatcccattgttaaagtagttaccttgttactgctggcacttgtcacctgatgatgtgaaccattacctttcttcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0552900, RefSeq:Os05g0552900