Os05g0554500

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Revision as of 10:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0554500| Description = Conserved hypothetical protein| Version = NM_001062805.1 GI:115465340 GeneID:4339555| Length = 4155 bp| Definition ...")
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Gene Name

Os05g0554500

Description

Conserved hypothetical protein

Version

NM_001062805.1 GI:115465340 GeneID:4339555

Length

4155 bp

Definition

Oryza sativa Japonica Group Os05g0554500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27640325..27644479

Sequence Coding Region

27642405..27642503,27642614..27642707,27643112..27643321,27643633..27644345

Expression

GEO Profiles:Os05g0554500

Genome Context

<gbrowseImage1> name=NC_008398:27640325..27644479 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27640325..27644479 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgaggagaggtggagcggcgaagaagccggcgggcggcggcgagctgtcccgcttcctgcagtcgcacctccagaccatcaacgacaccttccagatgatggcggaggcggctcccggcggcttggagcggacggagtggtctgaggtcgtcaagctcggcgagcaagtctccaggcaggccactgttgctggaatggtctggagtggtgatttgcctgatgtagaaacactcaaggagaacatcgtcgcatatttcaacatcctgcagggtttccttttgggttgccacggcagcacagttggcgcaggacccacacttcacaaatccatctgtagctctgcaaagaatgttgttgactccagcttctcattgttcaatcaagctgtttctgcttatgaatcacgcagtcctgaccggaaaacaactatacctcaggtgacaggaactgtatgggaagcatgtcttgctctcaacaaggtaccaacaaccaactgtgttgccataggacgagccatgactcagataggtgtgtatctgaaggatattctccgagagatgaaagaactaccaattggtgattctaatggcactgctgaaaaatcttctaatggagctgtggacaccacaagttgttctgatagagatggatcgtcaagtgaccttgagttagatgaggacttcactgaagaggaggttgctgttgccaaattggttgtcactgtggcttccgatgcgcttgttgtggtgaaagaaacaattcgtttcattacttgtttgcttaagatctcaggtaaccgaagtggagctaatgaggaaaaagttgagacaatggaacaattgttgagctgttgcagacaggctgctgaccagattaacgacctcggggcgtctgtgtacccaccacaagacttatctgagatgaaatcctcagtgaaaagattgtatggtggcgccaatgcaatgcggagggaaatcaggagccttggtggctcacctgagggtgcctttgtagcccttgaaagatttgagaagtccctgggagctctagaagtggagatagctgatgatgtagcaaacgagatggaaaatcttaccattagctcgtcctga</cdnaseq>

Protein Sequence

<aaseq>MPRRGGAAKKPAGGGELSRFLQSHLQTINDTFQMMAEAAPGGLE RTEWSEVVKLGEQVSRQATVAGMVWSGDLPDVETLKENIVAYFNILQGFLLGCHGSTV GAGPTLHKSICSSAKNVVDSSFSLFNQAVSAYESRSPDRKTTIPQVTGTVWEACLALN KVPTTNCVAIGRAMTQIGVYLKDILREMKELPIGDSNGTAEKSSNGAVDTTSCSDRDG SSSDLELDEDFTEEEVAVAKLVVTVASDALVVVKETIRFITCLLKISGNRSGANEEKV ETMEQLLSCCRQAADQINDLGASVYPPQDLSEMKSSVKRLYGGANAMRREIRSLGGSP EGAFVALERFEKSLGALEVEIADDVANEMENLTISSS</aaseq>

Gene Sequence

<dnaseqindica>2081..2179#2290..2383#2788..2997#3309..4021#attggggaaagaataatttcctttcgttctactcgcgtccggagaggcggatagtcggagacagcgcgcgtccccctcgccgccgcgtcctcctcaagtctccggtgccatctctccgtgcctcctcccatcgttgctgccaccgcgtctcctcccaatcccctccgtctcctccccattcacagattgcggcacaccactaggtataaagagatcacagcatcaccggtcagcccatcccaaatccggccagcgctaacccctcgtcgccagccatcacaaagaggcgccctggttccacgcggcggtggcggcggcgaaagccatgaaactcaaatggaaccattgaggtcagtgccatgtagactcacagcagtggcggcggctgcccatggagctcgatggggtcgtagtagtggtccgtgtagatgcggctgtggcccatgtagagcatgctccggcgaccccatagatgcttaggccttctagctgtgcgccaccacatccttattcttctctctgcagaggccatgtcaggattgctccaagcatgcatgccaggatcttcgctatgctttggccgatgcacacaaggtgctcgatgaaaagtttacttgagattggtctgctatttgatcagtccgtgggaactccccagctagctagctagctagcttaaacttgcgattaatttaactcaagcaatgaagcgaataagcgatgcattcatccgtcagttgatgatggcttttggtatgtagcttttgaacttaatgtgctttggttttatggctgtgtttagttcaacgctaaaattgaaagtaaaaattagaacgatgtgatggaaaagttgaaagtttgtgtgtgtagaaaagttcgatatgacggaaaagttggaagtttaaagaaaaagttggaatctaaacaagacctatattatatttttgttctcttctgttggtgtgtcctaacattattgtcttccctcattaactaaataattaatactggagtatcattttaaataagagaatagtgatgaacacttatcaattatggtctagaaggagaaggcactgaaattttctgtaactgatatacatcttcaaggaagaagcaccaaccttttctacgattgataaaacgtatgattgtttgtcacatgataaagtaactcacagaatgccaatttacctattttactacattgtcagattccatatgcgcatgtacagcatcacaatgattcatttgatgctcatattcggttttagaaatattggtaaattttcttttagaataactcctatgactctaattggtctttatatttcacatatttcattttgctgctgaaagctagattgaattgaagagctgcaaatacagaaatccgtatggatatacatcggatttgtttactcttttatcatactccaaacccaacctaattcatttttgttaactctgcgaagtgcacatggtaggataacttaggttcatacacttttgaagtcagaaatattttgtacatcactttgttagattttactactctctgtcagtatatgagtcagttcctctcatcaccaagcagagatgatttataggtattgtttccaatttcgtactgataacagtacttgcgattattacttaagataggcgagagagatacttccaacctatgcagcggtggttctaacaattatttattaagttctatggtattgtcaattttcaaatttaaagtagaatttcataccatatattttgactcatgtatacaaggttttcatacgggtatttaatgtcgcgcaacgtgcgactaagtggctagtccagctgtgacggggaatcacggtcgtattccagcacgaatcttaacttcaatcgaacggcccacatcgacgcaatgtcaggagggccaaccggccaagcccaacttcccccaaaagccctaacgaaataaacccttccgcccccgccgccgccgccgccgcctcgccgcggctcgcatccctcttcctctccctctcttcttcgccggcgcgacgcgacgaggcggtagctgcctgccatgccgaggagaggtggagcggcgaagaagccggcgggcggcggcgagctgtcccgcttcctgcagtcgcacctccagaccatcaacgacaccttccaggtttggcacccgagtctctctatcccgatggggtcatagcacggctctaagcctccaatcccacggtaactcacggcgcggcggcgtgcttatttactttgggttctcagatgatggcggaggcggctcccggcggcttggagcggacggagtggtctgaggtcgtcaagctcggcgagcaagtctccaggcaggccactgttggtaggtctaagaacgaacgatttctctccccacgtttcgtgcgctcagttgatcggactatacacctacttaatttagcgtcggtaggtttagattgtttaatttcagcggaaagaatcgcttggatagaaaaaactgttggggaaatcaaggtgttagtttattattccgcccaattaagcttggcaaggaattaatgtagcagcattaggttatagttcagctgctgtatatcatcatatagcagggaaatgttatttgcattggccatttgtttctttctagtggttagggtagcaaatgcaatatccaaccaatgtggtgtcgcgatatactgataccgtttctgtgatgatgtaaccttagctttgtcactgttcgctgatgtctgtttttcaatacagctggaatggtctggagtggtgatttgcctgatgtagaaacactcaaggagaacatcgtcgcatatttcaacatcctgcagggtttccttttgggttgccacggcagcacagttggcgcaggacccacacttcacaaatccatctgtagctctgcaaagaatgttgttgactccagcttctcattgttcaatcaagctgtttctgcttatggtaagtaaaaacctttctcaaggatcttcctttgtctgaagctcccttttgtcttcgtaactattaggagtagataactaaatagtcattcagaattaactaatgtatgcggacaaccctcataactaaatttgatgatctaatttccttacgactaaagtgagaaggacaaatttaccattttctgctttttattttccttatggtggtcacgatgtaatgcataagtggataagcagtaagaaacctgaatagtaatgcagtatgcaagaggatgttactagcattcacagcttttttgtgacgtgcagaatcacgcagtcctgaccggaaaacaactatacctcaggtgacaggaactgtatgggaagcatgtcttgctctcaacaaggtaccaacaaccaactgtgttgccataggacgagccatgactcagataggtgtgtatctgaaggatattctccgagagatgaaagaactaccaattggtgattctaatggcactgctgaaaaatcttctaatggagctgtggacaccacaagttgttctgatagagatggatcgtcaagtgaccttgagttagatgaggacttcactgaagaggaggttgctgttgccaaattggttgtcactgtggcttccgatgcgcttgttgtggtgaaagaaacaattcgtttcattacttgtttgcttaagatctcaggtaaccgaagtggagctaatgaggaaaaagttgagacaatggaacaattgttgagctgttgcagacaggctgctgaccagattaacgacctcggggcgtctgtgtacccaccacaagacttatctgagatgaaatcctcagtgaaaagattgtatggtggcgccaatgcaatgcggagggaaatcaggagccttggtggctcacctgagggtgcctttgtagcccttgaaagatttgagaagtccctgggagctctagaagtggagatagctgatgatgtagcaaacgagatggaaaatcttaccattagctcgtcctgattgctggaacttgaaagatttgccatacctatatgataatatgtcctcttgttcgagctataagcttttgttgttcaactaaaacgatgaatatgtataatcctttccagtgtgagatcaaatgcttattgctt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0554500, RefSeq:Os05g0554500