Os05g0562000

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Revision as of 10:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0562000| Description = Conserved hypothetical protein| Version = NM_001187593.1 GI:297724316 GeneID:9268712| Length = 2501 bp| Definition ...")
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Gene Name

Os05g0562000

Description

Conserved hypothetical protein

Version

NM_001187593.1 GI:297724316 GeneID:9268712

Length

2501 bp

Definition

Oryza sativa Japonica Group Os05g0562000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28039939..28042439

Sequence Coding Region

28040239..28040340,28040437..28040512,28040606..28040793

Expression

GEO Profiles:Os05g0562000

Genome Context

<gbrowseImage1> name=NC_008398:28039939..28042439 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28039939..28042439 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacattttggaccctgtcttgcaacaccgggaggtctccgatgtgagtgctaagcaccgtcagacagttacgatgatccacacaggcttgctaacatgtataaacaaattcttcgatgactgggatattaacccggatggatggacatgtacgtaccacacaaagattagcccgaggtgccaaaaatggaactctgtttttcacacattatactatgcgcgcgagttctatgatggcaagctgagcaatgttctagattcgggtagggttgctgccttgcgcagggatcttttctacaagctcctgactatggaagggaacagcgctgagctgccaagtcacattgcgagatacttggagtag</cdnaseq>

Protein Sequence

<aaseq>MHILDPVLQHREVSDVSAKHRQTVTMIHTGLLTCINKFFDDWDI NPDGWTCTYHTKISPRCQKWNSVFHTLYYAREFYDGKLSNVLDSGRVAALRRDLFYKL LTMEGNSAELPSHIARYLE</aaseq>

Gene Sequence

<dnaseqindica>2100..2201#1928..2003#1647..1834#gtaatgtgactattgtttttcccccacaagtccaaaacacagttttccaaacgcaagacaaatgtttcctcgattggttggtatcagcagctgctgtgggagaagctaacatgagtacgtatacacctcgtatatatccttgaacccacccaacacacaacaaattaaatgagagattttaaagaatgaaatgcatctatcgtgtttgtgttgctgctgttgcaggagacggcgccacattggatcaaaacaacaatggtgcacaggataagtaccaagggcaatcagaacgttgcgagacgcagatgacgaaagaggcggggaatcatctaaggccatcttgcatgtcatcgttttcaatgcgcacagttcatgaatggtggccaaactctatattagctgggagattattccgttggcttgaggagtcatgtgatgacgatataaccgggtgtgtgcaaaaggagttctttaaaaatgcgtgaattctcattacacaaaaactttgtactgatttttaattgtttatcctatatgaagggtttggttcaagcacgacaagcctacatcaattgagataagtgccaaggaaatcaaaatgcaggtcatccgcggtggtattctacatgcggacctttgttcagcattgatcagactctaccaacagttagatgccaagatgaatacaaacccatgtgggcagcggtggcgtcacttcttcctaccccaattcgcggtacacacacacacacacacacacacacacacacacacacacacacacatatatatatatatatatatatatatatatatatatatatatagtaaatttgtttggtgctccatggtgcccgggcaccattattgaaattgagtatatacccaattcaaatgagtatgaaactttttcaattacttaggtattaacattaactactttactaactagtttaaagcaagtttgaactgaatttgaacttgtttttgttagattttgattctaggtatatagcatccatacatataattagttaggtatgtaatcatggattgtgaaataaagttaaatttgagttttttttgttgataagtataggtatgaatcaaattattataactaggtatatactcacaatttgaaaattttgaaaaatttgagtaattttgtgcattagataccatggtgcccgggcaccatggtgccccatatgaatgtcctatatatatatatatatatatatatacgtatatatatatatatatatacgtatatacatatgtacatgtacatgtatatacatatgtatacatgtacatgtatataagaaatcatggttaaaacaatgaccaaagcttggtgtcttttccccttgattttggttttagaaagctttgatgtttgaacgaaacttcagttccatgaaagcagtcagtgacatgtttgatcaacatattagcggctacaaaatacagaactgccaactggtacggattatatattgtgtttctttatccaatctcctttgatcatcacatatactgactagtgaaccattttatttcgaaaatacagctcatttccccggttcaattagctagtgatacatgggcatgctacatttgggacatgggagaagaggcaaatgcacattttggaccctgtcttgcaacaccgggaggtctccgatgtgagtgctaagcaccgtcagacagttacgatgatccacacaggcttgctaacatgtataaacaaattcttcgatgactgggatattaacccggatggatggacatgtacgtaccacacaaagattagcccgaggtgccaaaagtgggtagcttctgccaatgccacacatacacaagaaagaaaagaaaatgaaatttcatcccataacaaatttgagtcatcttcctgctgcagatggaactctgtttttcacacattatactatgcgcgcgagttctatgatggcaagctgagcaatgttctagattcggtgagcacattgcattgatacatttcctctttttctttccaccaattcgattaacctgaataataaccgtgattccccatcatttgtctgtcgcagggtagggttgctgccttgcgcagggatcttttctacaagctcctgactatggaagggaacagcgctgagctgccaagtcacattgcgagatacttggagtagttgtaccaagtgtcatgctggtcgtttagccttttgctagtatgtttatgctgcaagtatctgacgagaacttaggaagttgtcttgtgaccaggataattcccaagaaatctcctttatctaaaaaaatattctaggcgtctagataagccagtgttttctattgataatagcttgcactgaataaaggtatagcagcaagttgtttactagtagcatgtagcaaaagccttttgtatggcttccggcatgttaggactctttgggaagtgcatcactgaatgaatgagttttctgagt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0562000, RefSeq:Os05g0562000