Os05g0563100

From RiceWiki
Revision as of 10:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0563100| Description = Guanylate-binding protein family protein| Version = NM_001062859.1 GI:115465448 GeneID:4339613| Length = 1094 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0563100

Description

Guanylate-binding protein family protein

Version

NM_001062859.1 GI:115465448 GeneID:4339613

Length

1094 bp

Definition

Oryza sativa Japonica Group Os05g0563100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28091094..28092187

Sequence Coding Region

28091349..28091567,28091693..28091806,28091916..28092059

Expression

GEO Profiles:Os05g0563100

Genome Context

<gbrowseImage1> name=NC_008398:28091094..28092187 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28091094..28092187 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggcatagatgaagctgcacttgatcgcctttcactggtgacagaaatgaccaaacatatacgtgtcagggcctcaggtggaaggtccactgcatctgaactagggcacttttcacctgtctttgtttggttgctgagggacttttacttggatttgacagaagacaacagaaaaattactccaagagattacctcgaactggctttgaggcctgtacaaggtggaggaagggatgtatcttctaagaatgcgatacgggagtccatccgtgcactttttccggatcgagaatgcattacacttgtgcgacctgtgaataatgagaaagatcttcagcgccttgatcaacttccggtatgtattatcattacttcctttgaactgctatcaactagcataactttttttgtcaaagtttatagctgcatacttgtgcaactttgctgcacatgttggactcttgactgctga</cdnaseq>

Protein Sequence

<aaseq>MGGIDEAALDRLSLVTEMTKHIRVRASGGRSTASELGHFSPVFV WLLRDFYLDLTEDNRKITPRDYLELALRPVQGGGRDVSSKNAIRESIRALFPDRECIT LVRPVNNEKDLQRLDQLPVCIIITSFELLSTSITFFVKVYSCILVQLCCTCWTLDC</aaseq>

Gene Sequence

<dnaseqindica>621..839#382..495#129..272#aagtatgttcatatacaaccaggtaatttgctgagcagctgactgaatgttcttctaattttgttaattgggaagacatcatagagtggaattatactggtgttctctacttcttttgcttcttacagatgggaggcatagatgaagctgcacttgatcgcctttcactggtgacagaaatgaccaaacatatacgtgtcagggcctcaggtggaaggtccactgcatctgaactagggcacttttcacctgtctttgtttggttgctgagggtacgctgtggattttctcttcttaaatcaactctttggcacatgcatgttctgatgtttacgcagcctgtgacttatttgatactgagtcattatttgtttcctataggacttttacttggatttgacagaagacaacagaaaaattactccaagagattacctcgaactggctttgaggcctgtacaaggtggaggaagggatgtatcttctaagaatgcggtatggcagcatgagtttcttgcagtgcattattcataaaattatctggtgcaacaatctttctgatgcatcatttttaacatatctataagaaactgatgcatatgttgtaatgtatctgtaagatacgggagtccatccgtgcactttttccggatcgagaatgcattacacttgtgcgacctgtgaataatgagaaagatcttcagcgccttgatcaacttccggtatgtattatcattacttcctttgaactgctatcaactagcataactttttttgtcaaagtttatagctgcatacttgtgcaactttgctgcacatgttggactcttgactgctgattggatttcaatatttgaaaaaaaaaggatggtagttatgatataatctcatagataatagcataatcacatctctgaaaaatgatgatgacataatcatggtacctgccagaaacatcggccttttggccaatatgtgcacatggcaatggcacgtgtctttattgttgtaaatactggcgctttcacaacatggactgtgatataccttgttggaatttaactgtggggccttcccctacaatgctttccctc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0563100, RefSeq:Os05g0563100