Os05g0564050

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Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0564050| Description = Conserved hypothetical protein| Version = NM_001187597.1 GI:297724324 GeneID:9268608| Length = 3922 bp| Definition ...")
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Gene Name

Os05g0564050

Description

Conserved hypothetical protein

Version

NM_001187597.1 GI:297724324 GeneID:9268608

Length

3922 bp

Definition

Oryza sativa Japonica Group Os05g0564050, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28154152..28158073

Sequence Coding Region

28154746..28155366

Expression

GEO Profiles:Os05g0564050

Genome Context

<gbrowseImage1> name=NC_008398:28154152..28158073 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28154152..28158073 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaagcagattgtcagttgaaatgttttgaagaagataaatccacatcatcacccaagactagttctcactctgtgcatttggacactggagaagataataacaatagtgaaggggcaaagtttgaggtggttgctgcagaagaagaacttgatatgcttcttaatacgcttggtggaactcatctttctggctccaatttagatgaatcatttggaaacaaatcaacattgcaagatgtgaaagtcaatcaaccagataagaaagttacacctagcacttcatccaaatcatcggtgactgctgcttgtgacgatgctctagatgacttgctttcagagacttctccttctgtccagaatgaaggttttgctgaaccaggctcaacttccaagaatgaccacaatattgacatcagatatgctaaccagatagatatatctacatctattgatgatttggtggacgacttgctcactgacacttcactgtgcttgaatggacagaaacaaactacatctgctaagggcaaagacaacatctcaagtgtcagtgttcctcctaattccggaccctcaaatgcgtcggacgattttgattcatggtttgattctctctag</cdnaseq>

Protein Sequence

<aaseq>MKADCQLKCFEEDKSTSSPKTSSHSVHLDTGEDNNNSEGAKFEV VAAEEELDMLLNTLGGTHLSGSNLDESFGNKSTLQDVKVNQPDKKVTPSTSSKSSVTA ACDDALDDLLSETSPSVQNEGFAEPGSTSKNDHNIDIRYANQIDISTSIDDLVDDLLT DTSLCLNGQKQTTSAKGKDNISSVSVPPNSGPSNASDDFDSWFDSL</aaseq>

Gene Sequence

<dnaseqindica>2708..3328#ttctccctccaatggatcccaaggcggcggcgaaggcgaagcgctcgcacacggtgcgggggcggcgcgcccaccagactcccgccgccgccgccgctcacaggcagaagcgcgcggaagccgccgccgccgccgcctccgcctccggcccccgcggccgcaacctcccgtcgaactgggaccgctacgacggcgaggacgatgccgatgaatccgcggccccctcggagtggaccggcgaggtggcgccgcgcagcaagggcgcagacttcggcttcctgctcgagcaggctcgggctcagccccgcgaggcgcagcgtctctcctcccaggattcgccattcggtgagtgaccctacctccactacctcattgacaaagctcatcgggagaatcgcttcaagcatgaactgcgatccttgcttaccattacatagacacgatcacacgaaacgagggcactagctaaactgagaaatattttgttcttagtcatattaaacctcacttaagaagccagttgagcataccaaacatcatgaggtactcctttgtttatagaatttgagttgagcatacatctcgtaggccgctaggtagttcaaacggagtttctgctgtgtcagttagtatataaccacaacttacattttggtttgagagttttggaaaattgatgtctgtaatcggttattttgatgatgatcatgtgatgtgtcctttgggaagtgggcctactatttgtgattgctttctccactgttgctaagtttgttaattttatttttcttttttttttagattttatgcaggcttcaacctctatgcttgaagctaaaggggaagagattttgtcctggtgtgaagatgacaacttcatcttagaagatgatttagcacccgatttcgaggtaaaatttggtgctgtgatattacgtttgttacttgtcttgtgctgccacatcaagtaaactattgtaatgtttggtcttagtgagacgaatgacatgtacatgattaaaatgttttgtttgagcatggttggggctatgactgaaacctctctttgtttcttgcatcgagactattgtcagtttacagagtgaaatttgtctggatagcttgatgatagtagtccgaacagacagggatgtggaatttagactttattttgatttgtagaccctcatgtagttttgattatgtaccttacaatttgtgtatcaactcttaaaaccttgtgaatttgggcagcttcatatcacatttttagatatttatgtgagaatttgtttcccctcaacttttaggtaccttttctctccatggatctgcatgcattggccacccatctttcgaagcttaagctttctgagaggcttttcttagagaaagatctgctacctgaggatctggtacgtctgtttatagcaattttctttagttttgctaattttccaagtactcaaatgtatttgatcatgtgctacattgtctacttttagtaaactgtaactgtagttttgcttttccgtgagaaattgtatatacccttgttttgttttttctaaagttcaatttaaaaaatcgttatgaacaaacggtcctttacactatgttcaagtaggggtttaacttacttcatgcaaacattattcttgaagtgtctacgggtctatggcgacacccaatctgtatacaatgaaaatgtgcaatgttccttattctgatttccatgtgataaaacaaacccttaaaaggacaatttgggctggtacccttatggttgatctgtagtagtcatcatcacctaggtgcctacccttttgacctccacttgctacaagttaatctctgctgttaatgcctgtagctcatatgccttgccatggcaggtctgcctgcaatgcagcctttcaatgctctggttgatatttgctgctggtattattgatatccatctgcctattggccattcctctaggcactctattttgtgcattaaccacactatggtttgatatctacctttcatatttcactaatgcaccttttgccagtggcccatcatggtaactgtctgcactacgatctcttagttctgccatcagccacatagcttatttttagcttccaaactttctgagtggtggaaggattattttttgtacagtacaatagccatctgcataggattagatagagtaatgaatttcactgggtatttaaaccctagtaaactatgtctattttacctattgtactgggacgattggaattatttttagataatggactgaaatctggcctctatacccacatgtagatatacacagccaactgggatgatttagagcccttattacttagctttgtgcatggttcatgcaattgttaggtcgttggttcataaaggtttttgatctgttagtattcatcttagtaagttagctgtttctccctgccttggatgcttttatctattgatgttttaattgcaagctttgtatatgcctactttacttgccattaagatcattttcttttgctattttttttttcattgtgtattcatggttttgcctgattgttataggctgttgcatctgaggtcaatcaaatacagattcaaagaggcacagatgtggatagtgatgctaaaggcagcttgattcatgaccatgacagcattcgttgtgatgatcaaatgaaagcagattgtcagttgaaatgttttgaagaagataaatccacatcatcacccaagactagttctcactctgtgcatttggacactggagaagataataacaatagtgaaggggcaaagtttgaggtggttgctgcagaagaagaacttgatatgcttcttaatacgcttggtggaactcatctttctggctccaatttagatgaatcatttggaaacaaatcaacattgcaagatgtgaaagtcaatcaaccagataagaaagttacacctagcacttcatccaaatcatcggtgactgctgcttgtgacgatgctctagatgacttgctttcagagacttctccttctgtccagaatgaaggttttgctgaaccaggctcaacttccaagaatgaccacaatattgacatcagatatgctaaccagatagatatatctacatctattgatgatttggtggacgacttgctcactgacacttcactgtgcttgaatggacagaaacaaactacatctgctaagggcaaagacaacatctcaagtgtcagtgttcctcctaattccggaccctcaaatgcgtcggacgattttgattcatggtttgattctctctagagacaattgccatgatgaagtttcagttggatcctttactgcagcgcagaagcccattgcacttatgttgacttcaagatctagtttatagctttcaggaagctgtcttttgaagctcacataccaatcagtatggaggttcactggggaacaagagttgatacagtgatagtctaaaagcctggcccccatcaccccatggcttccactttttccactctgcacgtgttagttcaaggcaaagactttgctatggtgtcacactgttgcttaatgactggaatgcaggaagcttactgctgtaaaacctaaagctcccctacatctacatgtgccttcttgaactgattatctgattatagtcacctttgtgtatcctgtagcatacttcctccgtttcacaatgtagactttctagtatcgcccgcattcatatagatattaatgaatctagattcatatgtgtgtctagattcattaacgtctatatgaatatggacaacgctagaaagtcttacattgtgaaacggatggagtactttgttgttttttactgaaacggagctaattctaacagtctggtctccatttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0564050, RefSeq:Os05g0564050