Os05g0566500

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Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0566500| Description = Similar to Initiation factor 3d (Fragment)| Version = NM_001062878.1 GI:115465486 GeneID:4339634| Length = 2072 bp| ...")
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Gene Name

Os05g0566500

Description

Similar to Initiation factor 3d (Fragment)

Version

NM_001062878.1 GI:115465486 GeneID:4339634

Length

2072 bp

Definition

Oryza sativa Japonica Group Os05g0566500, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28283708..28285779

Sequence Coding Region

28283943..28285700

Expression

GEO Profiles:Os05g0566500

Genome Context

<gbrowseImage1> name=NC_008398:28283708..28285779 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28283708..28285779 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcttcgacgtcggcgtcgtcgccttcaacccggagggctggggccctcccgacaccgcgccggcgccggcatcccttggcggtggcgccgccgcggcctccatccccttcgcgcccttctcccgctcggacaagctgggacggatcgccgactggacgcgcaacccggcgggccccgccgccctcgccgccgcctcccgcgactccgtcttcgacttcacctccgtcgacgactccctcgccgccgccgcggaggactcctcgttccgcctcgtcgacgccaagccgccgccgcgccacccgcggttcggccccaagtggcgcttcaaccagcgtccgcagctcccgcagcgccgcgacgaggaggtggaggcgcgccgccgcgaggccgagaaggagcgcgcccgccgcgagcgccacttccagaacaaccgctcccaccaccaccccggcttccgcggcaaccagtcctcgtcggccaagtcctccgtcgacatccagcccgactggaccatgcgtgagcagatccccttcgccaactttaccaagctctccttctccgtcgccgaccagcccgaggacctcctcttgtgcggcgccgtcgagtactacgaccgcgccttcgatcgcgtcaaccccaaggccgcacgccgcctcgagcgcttcaagtctcgcaacttcttcaaggtcaccaccaccgacgaccctgtcatccgccgcctggctgaggaggacaaggccacggtgttcgccaccgacgccatcctcgccgcgcttatgtgcacaccccgcagcatccactcgtgggacatcgtcgtgcagcgcgtcggcaacaagctcttctttgacaagcgtgatggttcccagctcgatctgctatctgtcaacgagaccgcgcaggagcagctcccagaaaacaaggatgatatcaactccgcgcactccctggctgtcgaggctacctacatcaaccagaacttctcgcagcaggtgcttcttcgcgatggtgagaaggttacctttgatgagcctaacccgtttgcttctgagggcgaggaggcagcatctgttggctaccgctaccgccgctggaagctggatgatgagatcagcattgttgctcgctgtgaagtgcatgctgtgaatgctgatccaggtggtggtcgtcagttccttactctcaatgcgctcaatgagtttgatcctaagattactggtgttgactggaggcagaagcttgagacacagcgtggggctgtgctcgctacagagctcaagaacaatgccaacaaacttgctcgctggacttgccaggctttgcttgctggtgctgacatgatgaagttgggatatgtgtcacgtgtgcacccccgtgatcactacaaccatgccatactcactgttatgggatacaagccaagggattttgctacacagatcaacctcaacacatcaaacatgtggggaattgtcaagtcgatcgtggacatctgcatgaagtttgaggagggaaagtatgtgcttgtaaaagatccagcgaagccacaagtgaggatctatgaggtgccttctgatgcatttgagaatgactatgtggaagagccacttccggaggaggaacaggttcggccgccatcagatgatgttgatgctaccgcggaggaaatggatgcagcggcagaggctgaggcgaacaatgcagcagcttctgcaggtggtgagggcgagaagagcgcagaagctgctgccgcttga</cdnaseq>

Protein Sequence

<aaseq>MGFDVGVVAFNPEGWGPPDTAPAPASLGGGAAAASIPFAPFSRS DKLGRIADWTRNPAGPAALAAASRDSVFDFTSVDDSLAAAAEDSSFRLVDAKPPPRHP RFGPKWRFNQRPQLPQRRDEEVEARRREAEKERARRERHFQNNRSHHHPGFRGNQSSS AKSSVDIQPDWTMREQIPFANFTKLSFSVADQPEDLLLCGAVEYYDRAFDRVNPKAAR RLERFKSRNFFKVTTTDDPVIRRLAEEDKATVFATDAILAALMCTPRSIHSWDIVVQR VGNKLFFDKRDGSQLDLLSVNETAQEQLPENKDDINSAHSLAVEATYINQNFSQQVLL RDGEKVTFDEPNPFASEGEEAASVGYRYRRWKLDDEISIVARCEVHAVNADPGGGRQF LTLNALNEFDPKITGVDWRQKLETQRGAVLATELKNNANKLARWTCQALLAGADMMKL GYVSRVHPRDHYNHAILTVMGYKPRDFATQINLNTSNMWGIVKSIVDICMKFEEGKYV LVKDPAKPQVRIYEVPSDAFENDYVEEPLPEEEQVRPPSDDVDATAEEMDAAAEAEAN NAAASAGGEGEKSAEAAAA</aaseq>

Gene Sequence

<dnaseqindica>80..1837#ctctccctccccacccaaaccctcgcgccgccacccccagcctccgcccggatccagaccgcctccgccgccgagcaccatgggcttcgacgtcggcgtcgtcgccttcaacccggagggctggggccctcccgacaccgcgccggcgccggcatcccttggcggtggcgccgccgcggcctccatccccttcgcgcccttctcccgctcggacaagctgggacggatcgccgactggacgcgcaacccggcgggccccgccgccctcgccgccgcctcccgcgactccgtcttcgacttcacctccgtcgacgactccctcgccgccgccgcggaggactcctcgttccgcctcgtcgacgccaagccgccgccgcgccacccgcggttcggccccaagtggcgcttcaaccagcgtccgcagctcccgcagcgccgcgacgaggaggtggaggcgcgccgccgcgaggccgagaaggagcgcgcccgccgcgagcgccacttccagaacaaccgctcccaccaccaccccggcttccgcggcaaccagtcctcgtcggccaagtcctccgtcgacatccagcccgactggaccatgcgtgagcagatccccttcgccaactttaccaagctctccttctccgtcgccgaccagcccgaggacctcctcttgtgcggcgccgtcgagtactacgaccgcgccttcgatcgcgtcaaccccaaggccgcacgccgcctcgagcgcttcaagtctcgcaacttcttcaaggtcaccaccaccgacgaccctgtcatccgccgcctggctgaggaggacaaggccacggtgttcgccaccgacgccatcctcgccgcgcttatgtgcacaccccgcagcatccactcgtgggacatcgtcgtgcagcgcgtcggcaacaagctcttctttgacaagcgtgatggttcccagctcgatctgctatctgtcaacgagaccgcgcaggagcagctcccagaaaacaaggatgatatcaactccgcgcactccctggctgtcgaggctacctacatcaaccagaacttctcgcagcaggtgcttcttcgcgatggtgagaaggttacctttgatgagcctaacccgtttgcttctgagggcgaggaggcagcatctgttggctaccgctaccgccgctggaagctggatgatgagatcagcattgttgctcgctgtgaagtgcatgctgtgaatgctgatccaggtggtggtcgtcagttccttactctcaatgcgctcaatgagtttgatcctaagattactggtgttgactggaggcagaagcttgagacacagcgtggggctgtgctcgctacagagctcaagaacaatgccaacaaacttgctcgctggacttgccaggctttgcttgctggtgctgacatgatgaagttgggatatgtgtcacgtgtgcacccccgtgatcactacaaccatgccatactcactgttatgggatacaagccaagggattttgctacacagatcaacctcaacacatcaaacatgtggggaattgtcaagtcgatcgtggacatctgcatgaagtttgaggagggaaagtatgtgcttgtaaaagatccagcgaagccacaagtgaggatctatgaggtgccttctgatgcatttgagaatgactatgtggaagagccacttccggaggaggaacaggttcggccgccatcagatgatgttgatgctaccgcggaggaaatggatgcagcggcagaggctgaggcgaacaatgcagcagcttctgcaggtggtgagggcgagaagagcgcagaagctgctgccgcttgaagggctcctcttcaggttgccagctagatcctttttggtttaattatctgtttttatggtttacatttaagagttgaactgcctgttatcgatacagtggtcttgtttggtcgatgataaaactgttctgtttttcatcttaaagatgctaagttgcccgctcaatgactatgttggtactcctagtttgatatcacttctggctgtttattgaccatgttactatgtttaaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0566500, RefSeq:Os05g0566500

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os05g0566500&oldid=14964"