Os05g0567100

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Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0567100| Description = Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-)| Version = NM_001062883.1 GI:115465496 GeneID:4339639| Length...")
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Gene Name

Os05g0567100

Description

Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-)

Version

NM_001062883.1 GI:115465496 GeneID:4339639

Length

5577 bp

Definition

Oryza sativa Japonica Group Os05g0567100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28313492..28319068

Sequence Coding Region

28314174..28314530,28314640..28314700,28315664..28315758,28315850..28315962,28316342..28316510
,28316583..28316622,28316703..28316767,28317391..28317504,28317593..28317657
,28317833..28317989,28318073..28318192,28318353..28318441,28318537..28318621

Expression

GEO Profiles:Os05g0567100

Genome Context

<gbrowseImage1> name=NC_008398:28313492..28319068 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28313492..28319068 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaacccgcagcgtggccttggtgctcctcgcggccgtgctgctccaagccctcctccccgcttcggcggcggagggtttggtgcggatcgcgctgaagaagcgcccgatcgacgagaacagccgcgtcgccgcgcgactctccggcgaggaaggggcgcgccggctgggcctccgcggcgccaactcccttggcggcggcgggggtgagggcgacatcgtggcgctgaagaactacatgaacgcgcagtacttcggggagattggcgtcggcactccgccgcagaaattcaccgtcatcttcgacactggcagctccaacctctgggtgccgtcggccaagtgctacttctcgattgcgtgcttcttccactctcgctacaagtccggacagtcgagcacttatcagaagaatggaaaaccagctgccattcagtatggcactggttcaattgctgggtttttcagcgaggatagtgttacagtaggtgatctggttgtgaaagatcaggaattcattgaagctaccaaggagccaggtcttactttcatggttgcaaaatttgatggcattcttgggcttggatttcaggaaatatccgttggagatgcagtacctgtgtggtataagatggtagagcaaggtcttgtcagtgagcctgttttctccttctggttcaaccgtcattctgatgaaggagaaggtggtgaaattgtgtttggaggaatggatcctagccactacaagggcaaccatacatatgttccagtctctcagaagggatattggcagtttgagatgggcgatgtcctgattggaggaaagaccacaggattttgtgctagcggttgttcagctatagcagactctggaacatcattgcttgctggccccacagccataatcactgaaatcaatgagaagatcggtgctactggggtagtcagccaagaatgcaagacagttgtttctcaatatggacaacagatcctagatctgttgcttgctgagacacagccatcaaaaatctgctctcaggttggtctgtgtacttttgatgggaagcatggtgttagtgctggaattaagagcgtagtagatgatgaagctggggaatcgaatggtctccaaagtggtcccatgtgcaatgcctgtgagatggctgttgtatggatgcagaaccaacttgcacagaacaagactcaggatctcatcttgaactacattaatcagctctgtgacaagctcccaagtccaatgggagaatcatctgtggactgtggcagccttgcatccatgcctgagatttcattcaccattggaggcaaaaagtttgcactgaagccagaagagtatattctgaaggttggtgaaggagctgctgcccagtgcatcagtggattcacagccatggacatccctcctccccgtggtcctctctggatcctgggtgacgttttcatgggtgcctaccataccgtgttcgactacggcaagatgagggttggcttcgcgaagtcggcctaa</cdnaseq>

Protein Sequence

<aaseq>MGTRSVALVLLAAVLLQALLPASAAEGLVRIALKKRPIDENSRV AARLSGEEGARRLGLRGANSLGGGGGEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIF DTGSSNLWVPSAKCYFSIACFFHSRYKSGQSSTYQKNGKPAAIQYGTGSIAGFFSEDS VTVGDLVVKDQEFIEATKEPGLTFMVAKFDGILGLGFQEISVGDAVPVWYKMVEQGLV SEPVFSFWFNRHSDEGEGGEIVFGGMDPSHYKGNHTYVPVSQKGYWQFEMGDVLIGGK TTGFCASGCSAIADSGTSLLAGPTAIITEINEKIGATGVVSQECKTVVSQYGQQILDL LLAETQPSKICSQVGLCTFDGKHGVSAGIKSVVDDEAGESNGLQSGPMCNACEMAVVW MQNQLAQNKTQDLILNYINQLCDKLPSPMGESSVDCGSLASMPEISFTIGGKKFALKP EEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGAYHTVFDYGKMRVGFAKS A</aaseq>

Gene Sequence

<dnaseqindica>683..1039#1149..1209#2173..2267#2359..2471#2851..3019#3092..3131#3212..3276#3900..4013#4102..4166#4342..4498#4582..4701#4862..4950#5046..5130#acgtcggttgttgctgttgctgctgctgctcctcccgttttccggtgagctctcgtggactccgcttgacttgatgtgggggtgaatctgtttgataggtgggggggattttgcggtgttcgtgtgagttttggtgtggatctgcttgttcctgacttcctgtgtgtttgagggtaatctgggttatttttacgggttgtttttggtgttttttgaggagttttttggtcggatgggtggtaggtctggatggattgttttggggcagctttgatcggattttaccctgggttggataactgatcggtgtttttctgttcgtggtttggtgttgatttttcggttagtgcatcggtgttttctgtaactgctgctctccgattttgagttttattttttttctgttttccccttcagttctagcctcggttccatggctgaaccttcgatttgattttgtttttttttcttatttcgtgagttactaatcttcgatattatcgactaatttcactgtgttttaatcgtatcgtcagttagagagttgagatctaacagtcgttgtgttccagtgttttccccatttggatttttcgatctcatcactcctgacgaaaaatttctcatcgccttctgtttggtttggtttggtttttctcgcgatttgccgcagatcgcagccatgggaacccgcagcgtggccttggtgctcctcgcggccgtgctgctccaagccctcctccccgcttcggcggcggagggtttggtgcggatcgcgctgaagaagcgcccgatcgacgagaacagccgcgtcgccgcgcgactctccggcgaggaaggggcgcgccggctgggcctccgcggcgccaactcccttggcggcggcgggggtgagggcgacatcgtggcgctgaagaactacatgaacgcgcagtacttcggggagattggcgtcggcactccgccgcagaaattcaccgtcatcttcgacactggcagctccaacctctgggtgccgtcggccaagtgctacttctcggtgagtccctgttcgatgcactggtcaaggggaattctcccaagagtcttgttgcgattgcgacctgtgctaatggtggatttttttttccttgtggcgattgatgcagattgcgtgcttcttccactctcgctacaagtccggacagtcgagcacttatcagaagaatggtccgtgccttaaaactttccccaaccgtgctagtttatgttgtgactgtctgcctctctcagtttacttggatgcattgacaacatccttttttgctattactcgtatttgctctatagctggtggcatatctcatgttgaaatttgcccttttaatccaaaattggatgtaattgaaagaatcctacgtggtagttatttggattttggtgtgaaaaaaaatagccttgttagaagaagcaaaattggatttagttaaaaggatactagatggtgttatttggattttggtgcaaatcaaattaggaggttggttttattcaagttaaagtttgttttaaaaaaattctcctaaaaagatagatactagatttgcatatatgcattgaaaattacatcttcgcttggcggttatacttttagtccctctaaattgttcaatcatttatgatgaaaaggaaaatcattttatatcacaaagtatttatgatgaaaggggaaaaatattctgcatgggtttgaacaaaatacgtggattggtgtagccttaacatacttgaaaagggtatgatgttgatgtagtgcccacatggtgtcgcttgacattaaaacgatatgcagtcaggattgaggaacattgctgacaatttactatcgctgtctgtgttgaccacaataattcagatgtaccatcctatcttctaactagaaagatgcatggaagtttcttacattatttccagcacttgaaattttagtgaaatatcattaaaacataaccacttactttgctgtgatatgaaataaatgttttatttcttggaaagtggtatattcatatattcttacagtaaatttattgattttcttttcatttatttctaaattttaaccacccttttggtagcttaaggaaaattgtatgtttgacagtcctgttttctgttgtttcatccctccaggaaaaccagctgccattcagtatggcactggttcaattgctgggtttttcagcgaggatagtgttacagtaggtgatctggttgtgaaagatcaggtctgcactatatatctcggttaacttactgattattatctctgatcatattgccccaaatatttttaacattgttgcttcaccgctttaggaattcattgaagctaccaaggagccaggtcttactttcatggttgcaaaatttgatggcattcttgggcttggatttcaggaaatatccgttggagatgcagtacctgtgtggtaagacaacctgacttacgtgatctaagtttttgatttctcactgtggttcacagtagaagagaaggtgctcttttgcatatagtgattatatttgtatgaatcttccactatctctaaccacagttcatctatgcacgatacatttataatggtgaagaatcctagatattgacctgctgattaacacaataggctaccttcattctgttaaaaccacgtatctcaaaatatttggctggttgttttcttgcatatttctgttttatttttctcattatatatattttggcgcatttgtcatgataattagatttttcacgtatcatgcacataatatagcagatccatagtccctaatgatatgtataaatcacaggtataagatggtagagcaaggtcttgtcagtgagcctgttttctccttctggttcaaccgtcattctgatgaaggagaaggtggtgaaattgtgtttggaggaatggatcctagccactacaagggcaaccatacatatgttccagtctctcagaagggatattggcaggttggtcctgtttctgctaagttctgtagtgttttcgacatttgatgtaatgtttgcattgactttgtgcagtttgagatgggcgatgtcctgattggaggaaagaccacaggtactgactcttgtttttcatatccgatctgtctaaatgagaaataatcttacacatcgttacacctttgctgctatcaggattttgtgctagcggttgttcagctatagcagactctggaacatcattgcttgctggccccacagtacgtaataagcttttgtttatacttgttttttttttatcatgatggcctacatttttcacaacagtaataagctttggagatctctactaaatttcacatctcagttttatttacttcgaaggaattatcgtcttaataatgagcctttttgaacccaacacatacttgtaggttttttttttaggtccaaaatttgcatacggaacctgtacagggtgcttaacaaatataataatgcagtaccccaatctatgttcagaaatatatttcctttgtttttttgctctgattcttggatcacctttcggaagcttctagccatgtctcgtcctttgtcctatcatgtattgttttgcatatatgaagtgttgtaaatgtagctgtactgtagcacagtatttattatatctaattattatctagagatgagttgtgctgctcaatcaattgacccccaattcatcatattacgcaaatgcatacacacaaaaggaacacctgttgggtctaatgtgcaaaggctttccacactcatccctactctttattgtcttcatactgtcttgtttgttcttaccaagttccaatgagtggttcacgagttaacacaatcatcgcaggccataatcactgaaatcaatgagaagatcggtgctactggggtagtcagccaagaatgcaagacagttgtttctcaatatggacaacagatcctagatctgttgcttgctgaggtttgtaatttgcttcaattttctggaaacagcttttgtcaattatatctttgatgaattaaaacaactttctgggattatgttgcagacacagccatcaaaaatctgctctcaggttggtctgtgtacttttgatgggaagcatggtgttaggtaagaactgcaaatgtttttcaagtgtctgaatctgtaaagtaggatattttcgttttgactcgattagcgattttggtgtcaagtgctatatcaattatgacttatttgagatcggattcgtaggcaatctgtactcactctcatttcttctccatgtggtatgtaaacacagtgctggaattaagagcgtagtagatgatgaagctggggaatcgaatggtctccaaagtggtcccatgtgcaatgcctgtgagatggctgttgtatggatgcagaaccaacttgcacagaacaagactcaggatctcatcttgaactacattaatcaggtgagcttagttaactcctgctctagggccattgtactggtagggatagattttccgttgcttaactgttatcaattttacagctctgtgacaagctcccaagtccaatgggagaatcatctgtggactgtggcagccttgcatccatgcctgagatttcattcaccattggaggcaaaaagtttgcactgaagccagaagaggtgcgatgatttctttatggtttctcttcttttttttcttcccttgggtgcatctagattagctgaaaagttggacacgcttgccggcccatctagtttgtgtagatatttgacgcactggcttgagcacataatttactctcttcttttggttgtgcagtatattctgaaggttggtgaaggagctgctgcccagtgcatcagtggattcacagccatggacatccctcctccccgtggtcctctctggtaaactatgcatttccaaacccttgaattagcagtgaaataatttcacttcttgtcatttttgatctttgactgatgcaccctacaatttgcaggatcctgggtgacgttttcatgggtgcctaccataccgtgttcgactacggcaagatgagggttggcttcgcgaagtcggcctaaacgtgttgttgtcacgttcctaatgacgaggtggacgcatacgccgagagaagaagaccgtagcttttaactagcgtatttatccggcgatgtgtgtatatatgcatgctacataacatgtttatgttttccaaggcctgagatggcgcccgtctattttagcttggcaagaatatctcggaccagtctctgttcgaattctcgtactgatatgtgaacttctgataacatgtgcactgtgttttgtgactgaattgctagtcagtccgaaggttaattatcccatggttgatgtgaagagagccaccggattattgcagctgtgatcacgtggttaagccttaaaagtgtggtggtttcttcagctaaatctaatgtggtggtttcttcagctgaagtcttttcacctaagtaactcttactctctccgtcccacaataaaagaga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0567100, RefSeq:Os05g0567100